Ecological plasticity of nest-building behavior of the redwing (<Emphasis Type="Italic">Turdus iliacus</Emphasis> L.) in Karelia according to individual marking data

The placement of 1918 redwing nests has been analyzed, including 214 nests of 90 marked females (2–8 known nests per female). A high level of intraspecific and individual variation in utilization of different types of nest supports is described. It is shown that redwings choose nest sites without regard to previous experience (either positive or negative) or to the placement of their parent nest. Under conditions of the northern taiga, such behavior provides for significant reduction of chick mortality by the end of the season. This is con- firmed by comparison with the song thrush (T. philomelos), which nests mainly on spruce trees.     

区域水战略方案选优的动态组合评价模型研究

水安全危机是人类进入新世纪以来在生存及发展方面所面临的最严重挑战之一。研究科学合理的水安全战略成为区域可持续发展的重大课题。针对区域水战略问题涉及众多因素且各因素之间动态关联的特点,提出了基于水战略方案优选的兼容度极大化动态组合评价模型（CMM—DCEM）,并将其成功地应用于我国广东省北江下游及其三角洲地区水安全战略方案优选评价。评价结果及模型基于不确定性的敏感性分析结果证明：CMM—DCEM实现了主、客观赋权方法以及单一评价模型的融合,使用实码加速遗传算法求解目标函数,克服了传统的组合评价方法计算繁琐的不足,评价过程更加科学合理。     

灌区河道串联闸群防洪优化调度

针对河道串联闸群防洪优化调度的特点,详细推导了河道串联闸群防洪调度的洪水演算公式,明确了关键计算环节,建立了串联闸群防洪优化调度模型,应用水力学圣维南四点隐式差分法和遗传算法相结合对模型进行求解。采用VB6.0开发了人机交互的闸群防洪调度系统。通过实例计算,验证了河道串联闸群防洪优化调度方案的合理性,可为河道串联闸群防洪调度提供参考。     

官厅水库入库断面水质多指标评价与演变特征分析

水体质量状况及其污染特征是流域水污染防治规划和治理措施制定的前提和基础。采用主成分分析和层次聚类分析等多元统计分析方法,选取溶解氧、高锰酸盐指数、化学需氧量等10个不同类型的监测指标,综合评价了官厅水库入库断面八号桥2006—2017年丰水期和枯水期水质年际变化特征,识别了不同阶段关键污染指标。结果表明:各年份丰水期(9月)大多数水质指标均优于枯水期(5月),特别是粪大肠菌群和氨氮,但总磷和高锰酸盐指数的差异较小。根据水质指标年际变化情况,可将研究期分为污染严重阶段(2006—2007年)、污染改善阶段(2008—2015年)和污染全面好转阶段(2016—2017年)。大部分水质指标呈现逐年好转的趋势,特别是粪大肠菌群、氨氮和五日生化需氧量,但总磷仍是官厅水库入库河流的重要污染指标。     

南京城市边缘带化工园区土壤重金属污染评价

为揭示城市边缘带强烈人为活动对土壤环境质量的影响,以南京化工园附近20km^2区域为研究区,网格化精确布点,采集表层土壤样品共计54个,并对其重金属Cu、Zn、Pb、Cr、Cd、Hg、As含量进行了测定分析.结果表明,研究区表层土壤中除Hg外的其它6种重金属含量均未超过国家二级标准;Hg是本区表层土壤重金属污染的主要因子.另外,应用地统计学的克里格方法对研究区内表层土壤污染的空间变异特征进行了分析,并讨论了研究区域的潜在污染源及其污染途径.结果表明,研究区内局部土壤重金属污染主要由蔬菜土壤高强度利用及农化产品投入所致,同时不排除污染水灌溉的影响.     

长春市春季PM2.5中金属污染与潜在生态风险评价研究

2014年春季采集了长春市大气PM2.5样品,测定了PM2.5及其17种金属元素的含量.PM2.5质量浓度为175.2±75.1μg/m3,变异系数为0.44,环境重污染日与优良日空气质量差异较大.PM2.5中金属元素平均含量顺序为Ca>Fe>K>Mg>Al>Zn>Ti>Mn>Pb>As>Cu>V>Ni>Cr>Co>Ba>Cd.采用富集因子法和潜在生态风险指数法对PM2.5中金属进行了评价.其中Cd、As、Zn、Pb、Cu富集因子大于100.金属综合潜在生态风险等级为极强生态风险,Cd的贡献率为83.2%,受人类活动干扰严重.     

Preimplantation genetic diagnosis of the fragile X syndrome by use of linked polymorphic markers

Fragile X syndrome is the most common cause of familial mental retardation. The most common mutation is expansion of a triplet (CGG)_n repeat in the 5′ untranslated region of the FMR1 gene on Xq27.3. The expansion is refractory to PCR due to preferential amplification of the smaller allele in heterozygous cells and the high GC content of the repeat and surrounding sequences. Direct detection of the normal parental alleles in preimplantation embryos has been used for preimplantation genetic diagnosis (PGD) of this disorder. However, this approach is only suitable for approximately 63% of couples due to the heterozygosity of the repeat in the normal population. As an alternative we investigated the use of polymorphic markers flanking the mutation to track the normal and premutation carrying maternal chromosomes in preimplantation embryos. Using a panel of 11 polymorphisms, six (CA)_n repeats and five single nucleotide polymorphisms, diagnosis was developed for 90% of referred couples. Multiplex amplification of informative markers was tested in 300 single buccal cells from interested couples with efficiency and allele drop out (ADO) rates ranging from 69% to 96% and 6% to 18%, respectively. Use of this approach is accurate and applicable to a larger number of patients at risk of transmitting fragile X to their offspring. Copyright © 2001 John Wiley & Sons, Ltd.     

Genomic erosion in a demographically recovered bird species during conservation rescue

The pink pigeon (Nesoenas mayeri) is an endemic species of Mauritius that has made a remarkable recovery after a severe population bottleneck in the 1970s to early 1990s. Prior to this bottleneck, an ex situ population was established from which captive-bred individuals were released into free-living subpopulations to increase population size and genetic variation. This conservation rescue led to rapid population recovery to 400–480 individuals, and the species was twice downlisted on the International Union for the Conservation of Nature (IUCN) Red List. We analyzed the impacts of the bottleneck and genetic rescue on neutral genetic variation during and after population recovery (1993–2008) with restriction site-associated sequencing, microsatellite analyses, and quantitative genetic analysis of studbook data of 1112 birds from zoos in Europe and the United States. We used computer simulations to study the predicted changes in genetic variation and population viability from the past into the future. Genetic variation declined rapidly, despite the population rebound, and the effective population size was approximately an order of magnitude smaller than census size. The species carried a high genetic load of circa 15 lethal equivalents for longevity. Our computer simulations predicted continued inbreeding will likely result in increased expression of deleterious mutations (i.e., a high realized load) and severe inbreeding depression. Without continued conservation actions, it is likely that the pink pigeon will go extinct in the wild within 100 years. Conservation rescue of the pink pigeon has been instrumental in the recovery of the free-living population. However, further genetic rescue with captive-bred birds from zoos is required to recover lost variation, reduce expression of harmful deleterious variation, and prevent extinction. The use of genomics and modeling data can inform IUCN assessments of the viability and extinction risk of species, and it helps in assessments of the conservation dependency of populations.     

A comparison of different lysis buffers to assess allele dropout from single cells for preimplantation genetic diagnosis

Single cell polymerase chain reaction (PCR) for preimplantation genetic diagnosis (PGD) requires high efficiency and accuracy. Allele dropout (ADO), the random amplification failure of one of the two parental alleles, remains the most significant problem in PCR-based PGD testing since it can result in serious misdiagnosis for compound heterozygous or autosomal dominant conditions. A number of different strategies (including the use of lysis buffers to break down the cell and make the DNA accessible) have been employed to combat ADO with varying degrees of success, yet there is still no consensus among PGD centres over which lysis buffer should be used (ESHRE PGD Consortium, 1999 ). To address this issue, PCR amplification of three genes (CFTR, LAMA3 and PKP1) at different chromosomal loci was investigated. Single lymphocytes from individuals heterozygous for mutations within each of the three genes were collected and lysed in either alkaline lysis buffer (ALB) or proteinase K/SDS lysis buffer (PK). PCR amplification efficiencies were comparable between alkaline lysis and proteinase K lysis for PCR products spanning each of the three mutated loci (ΔF508 in CFTR 90% vs 88%; R650X in LAMA3 82% vs 78%; and Y71X in PKP1 91% vs 87%). While there was no appreciable difference between ADO rates between the two lysis buffers for the LAMA3 PCR product (25% vs 26%), there were significant differences in ADO rates between ALB and PK for the CFTR PCR product (0% vs 23%) and the PKP1 PCR product (8% vs 56%). Based on these results, we are currently using ALB in preference to PK/SDS buffer for the lysis of cells in clinical PGD. Copyright © 2001 John Wiley & Sons, Ltd.     

Preimplantation genetic diagnosis for familial amyloidotic polyneuropathy (FAP)

Preimplantation genetic diagnosis (PGD) was developed more than a decade ago to offer an alternative to prenatal diagnosis for couples at risk of transmitting an inherited disease to their offspring. Portuguese-type familial amyloidotic polyneuropathy (FAP type I), is an autosomal dominant disease presenting an inherited mutation in the gene encoding the plasma protein transthyretin (TTR). We here report the first protocol for single-cell detection of the Met30 mutation in FAP type I and its application to PGD. A nested PCR reaction for exon 2 of the TTR gene was developed. The PCR product was then analysed by restriction enzyme analysis and SSCP allowing the detection of the point mutation. Ten clinical cycles were performed in seven couples. From the 93 metaphase II (MII) injected oocytes, 82 were normally fertilized and 78 were biopsied. A positive signal in the nested PCR reaction was obtained in 61 blastomeres, corresponding to a DNA amplification efficiency of 78.2%. No allele dropout (ADO) or contamination were detected. A biochemical pregnancy was obtained in three cases and a clinical pregnancy in one couple is actually in normal evolution. Copyright © 2001 John Wiley & Sons, Ltd.