Patterns of Genetic Diversity and Its Loss in Mammalian Populations

Abstract:  Policy aimed at conserving biodiversity has focused on species diversity. Loss of genetic diversity, however, can affect population persistence, evolutionary potential, and individual fitness. Although mammals are a well-studied taxonomic group, a comprehensive assessment of mammalian genetic diversity based on modern molecular markers is lacking. We examined published microsatellite data from populations of 108 mammalian species to evaluate background patterns of genetic variability across taxa and body masses. We tested for loss of genetic diversity at the population level by asking whether populations that experienced demographic threats exhibited lower levels of genetic diversity. We also evaluated the effect of ascertainment bias (a reduction in variability when microsatellite primers are transferred across species) on our assessment of genetic diversity. Heterozygosity did not vary with body mass across species ranging in size from shrews to whales. Differences across taxonomic groupings were noted at the highest level, between populations of marsupial and placental mammals. We documented consistently lower heterozygosity, however, in populations that had experienced demographic threats across a wide range of mammalian species. We also documented a significant ( p = 0.01) reduction in heterozygosity as a result of ascertainment bias. Our results suggest that populations of both rare and common mammals are currently losing genetic diversity and that conservation efforts focused above the population level may fail to protect the breadth of persisting genetic diversity. Conservation policy makers may need to focus their efforts below the species level to stem further losses of genetic resources.     

Living at the Edge: Local versus Positional Factors in the Long‐Term Population Dynamics of an Endangered Orchid

Abstract: Populations at the margin of geographic ranges of distribution have been considered more vulnerable than central ones, but recent reviews have caste doubt on this generalization. We examined the reproductive and demographic performance of a rare Euroasiatic orchid (Cypripedium calceolus) at its southwesterly range limit and compared our findings with those of previous studies of nine central populations at the center of the orchid's range. We sought to test the central‐marginal model and to evaluate factors involved in long‐term performance of forest Eurosiberian species with peripheral populations in southern European mountains. We characterized (structure, temporal fluctuations, herbivory, reproductive success, and recruitment at different habitats) four Pyrenean populations of C. calceolus of different sizes (5–3500 ramets) and monitored three of them for up to 13 years. Two quantitative stochastic models (count data and matrix models) were used to assess population trends and viability and the effect of herbivory. Contrary to expectations, and despite the negative effect of sporadic events of herbivory, the peripheral populations we studied (except the smallest one) performed similarly or better than populations occurring in central part of the species’ range in terms of reproductive success and population growth rates. Landscape changes over the last 50 years suggest that natural reforestation could be involved in the success of this plant at its southern limit. Forest expansion in the mountain regions of southern Europe may provide new opportunities for plants with geographic distributions centered mainly at higher latitudes and give some hope for their recovery in future scenarios dominated by biodiversity loss.     

THE EFFECTS OF SELECTED HERBICIDES ON BACTERIAL POPULATIONS IN AN AQUATIC ENVIRONMENT1

ABSTRACT: Heterotrophic, mesophilic bacteria derived from, and maintained in, a freshwater environment were subjected to three classes of herbicides. Diuron, 2,4,5-Trichlorophenoxyacetic acid, and paraquat, used as water soluble solutions, were added (0.7 and 1.4 mgA) to a laboratory culture of bacteria. Total numbers of the bacteria, representing several genera, were monitored for alteration of numbers and types. Temperature, pH, and dissolved oxygen were monitored and the culture medium was tested for residual herbicide. Alterations observed in populations were considered to result from herbicide additions. Each herbicide tested was found to affect bacterial populations differently. Reasons for observed differences are discussed. In this aquatic environment the herbicides remained qualitatively measurable for periods up to three weeks.     

Quantitative Analyses of Pollution-Indicator and Pathogenic Bacteria in Mumbai Waters from Ballast Water Exchange Perspective

As large numbers of ships either take in ballast from or discharge their ballast into the Mumbai Harbor region, it is pertinent to quantify microorganisms of health concerns and suggest on the suitability of water for ballasting purposes. To meet with this main aim, a selected set of general and pathogenic bacterial groups and their seasonal variations were studied from the Mumbai Harbor area. Sampling was carried out during postmonsoon (November 2001), pre-monsoon (April 2002) and monsoon (October 2002) periods. We quantified total coliforms and eight other groups of known human pathogenic bacteria from water, sediment, marine plant and animal samples collected in and around Mumbai Harbor. When compared with similar studies from other parts/harbors of the world, the Mumbai Harbor area has over 100-times higher levels of coliforms. The serotypes of Escherichia coli O157 and Shigella-Alkaligens Dispar group were abundant throughout the year. Even Vibrio cholerae, V. parahaemolyticus, Salmonella spp., campylobacters and aeromonads were present in large numbers. This comprehensive study, conducted with a view to quantify these bacterial groups and to evaluate the suitability of these waters for ballasting purposes, clearly suggests that both ballasting and deballasting be avoided in this region and alternative procedures should be developed for treating/handling ballast water.     

Effects of Polluting Soil with Cassava Mill Effluent on the Bacteria and Fungi Populations of a Soil Cultivated with Maize

The study was carried out to investigate the effects of application of cassava mill effluent on bacteria and fungi types and population in a soil grown to maize (Zea Mays L.) Microbial populations were determined before pollution of soil with cassava mill effluent, six weeks after pollution with effluent and at the end of the experiment. Results obtained showed that bacteria and fungi populations increased with time as rates of pollution increased. It was also observed that some bacteria present in the soil at the beginning of the experiment and up to the sixth week after pollution with effluent became extinct at the end of the experiment.     

广州市不同人群硒摄入量研究

通过酸消解、原子荧光-氢化物发生法测定了广州市市售109种常见食物中硒的含量,结合膳食结构计算了广州市不同人群的每日硒摄入量.结果表明,广州市不同食品硒含量有较大差异,均值为4.97～457.3 μg·kg-1,其中动物性食品硒含量明显高于植物性食品硒含量,硒含量较高的食品有动物内脏、鱼虾类、蛋及蛋制品、猪肉等,均大于150 μg·kg-1.广州市不同人群膳食硒摄入量有明显差别,不同收入人群的摄入量为高收入人群(102.6 μg·d-1)＞中收入人群(83.8 μg·d-1)＞低收入人群(66.6 μg·d-1);老人硒摄入量为73.3 μg·d-1,儿童为44.3 μg·d-1,大学生为86.8 μg·d-1,工人为69.7 μg·d-1;标准人摄入量为98.5 μg·d-1.动物性食品是广州居民硒摄入量的主要来源;其次是大米;蔬菜、水果和豆类及制品等植物性食品贡献很小.广州市不同人群每日硒摄入量处于良好水平.     

Internal displacement in Burma

The internal displacement of populations in Burma is not a new phenomenon. Displacement is caused by numerous factors. Not all of it is due to outright violence, but much is a consequence of misguided social and economic development initiatives. Efforts to consolidate the state by assimilating populations in government-controlled areas by military authorities on the one hand, while brokering cease-fires with non-state actors on the other, has uprooted civilian populations throughout the country. Very few areas in which internally displaced persons (IDPs) are found are not facing social turmoil within a climate of impunity. Humanitarian access to IDP populations remains extremely problematic. While relatively little information has been collected, assistance has been focused on targeting accessible groups. International concern within Burma has couched the problems of displacement within general development modalities, while international attention along its borders has sought to contain displacement. With the exception of several recent initiatives, few approaches have gone beyond assistance and engaged in the prevention or protection of the displaced.     

Intrapopulation Variation and Interpopulation Phenetic Differentiation of Chum Salmon (Oncorhynchus keta Walbaum) in Populations of the Northern Sea of Okhotsk Region

The results of phenetic studies on chum salmon populations from the rivers flowing into Taui and Yama bays, Sea of Okhotsk, are discussed. The heterogeneity of samples with respect to the frequency of a certain phene in females is not necessarily revealed when this frequency is analyzed in males. Statistically significant heterogeneity with respect to phene frequencies is observed in all chum salmon populations, whether the corresponding data are analyzed by years or throughout the observation period. This population heterogeneity is accounted for by specific phenetic features of each chum salmon population, although in different years it manifests itself in the frequencies of different phenes. The phenes distinguished on the head of fish contribute most significantly to interpopulation differences.     

A research agenda for increasing safety belt use in the United States

On November 13-14, 2003, a symposium on high-visibility safety belt use enforcement in Raleigh, NC: (a) celebrated the 10th anniversary of North Carolina's Click It or Ticket program; (b) documented current knowledge regarding safety belt use; (c) proposed strategies to increase use further; and (d) discussed research to support these strategies.     

Effects of Recent Environmental Change on Accuracy of Inferences of Extinction Status

Correctly classifying a species as extinct or extant is of critical importance if current rates of biodiversity loss are to be accurately quantified. Observing an extinction event is rare, so in many cases extinction status is inferred using methods based on the analysis of records of historic sighting events. The accuracy of such methods is difficult to test. However, results of recent experiments with microcosm communities suggest that the rate at which a population declines to extinction, potentially driven by varying environmental conditions, may alter one's ability accurately to infer extinction status. We tested how the rate of population decline, driven by historic environmental change, alters the accuracy of 6 commonly applied sighting‐based methods used to infer extinction. We used data from small‐scale experimental communities and recorded wild population extirpations. We assessed how accuracy of the different methods was affected by rate of population decline, search effort, and number of sighting events recorded. Rate of population decline and historic population size of the species affected the accuracy of inferred extinction dates; however, faster declines produced more accurate inferred dates of extinction, but only when population sizes were higher. Optimal linear estimation (OLE) offered the most reliable and robust estimates, though no single method performed best in all situations, and it may be appropriate to use a different method if information regarding historic search efforts is available. OLE provided the most accurate estimates of extinction when the number of sighting events used was >10, and future use of this method should take this into account. Data from experimental populations provide added insight into testing techniques to discern wild extirpation events. Care should be taken designing such experiments so that they mirror closely the abundance dynamics of populations affected by real‐world extirpation events. Efectos del Cambio Ambiental Reciente sobre la Precisión de las Inferencias sobre el Estado de Extinción