低温弱光条件下毒死蜱对黄瓜的毒性效应及油菜素内酯的调控作用

农药在使用中可能对农作物产生药害作用,而在低温弱光的亚适宜条件下,设施作物对农药暴露的应激响应可能具有特殊性。同时,作为一种新型植物激素,油菜素内酯在亚适宜条件下是否能够缓解农药的药害作用的研究有限。以典型的设施作物黄瓜为受试生物,通过人工气候箱模拟低温弱光的亚适宜条件,在毒死蜱(浓度分别为0.3和1mmol·L-1)暴露1、3和7d后,以实时荧光定量PCR对黄瓜叶片中光合作用基因(psaB、psbA和rbcL)、抗氧化系统相关基因(cAPX、DHAR、GR、CAT和GPX)、防御和应激相关基因(PAL、HPL、ADC和HSP70)的转录水平进行检测,阐明其毒性效应。并对比24-表油菜素内酯的预处理组,探讨油菜素内酯如何调控作物对农药胁迫的响应。结果表明,在低温弱光条件下,毒死蜱暴露抑制了黄瓜叶片中上述大部分基因的转录,而24-表油菜素内酯预处理后其转录水平显著上升,表明24-表油菜素内酯可有效且持续地缓解毒死蜱的药害效应。     

双酚A对斑马鱼成鱼肝脏功能基因转录调控的影响

运用实时定量即时聚合链式反应RT-PCR方法,研究了双酚A对斑马鱼成鱼肝脏的功能基因转录水平的影响。结果显示,28 d半静水暴露以后,FGF8A和STAU 2 表现出传统的正剂量—效应关系,CLDN 1和CALCA的表达为倒剂量—抑制效应关系,SP 4基因在15 μg·L^-1 双酚A时表现为显著抑制效应,但是在150 和1 500 μg·L^-1却表现为显著的诱导效应。 试验进一步探讨了这些表达异常的基因在双酚A干扰去除后能否自我调节和修复。结果显示,CLDN 1能恢复到正常表达水平,而其他4个基因在低剂量组却维持原来的高毒性作用水平甚至表现出更高的毒性作用。研究证明双酚A对斑马鱼成鱼肝脏的基因转录调控具有一定的非单调剂量—效应作用。     

生物样品体外致突变高通量检测方法研究进展

评述了几种常用的体外致突变检测方法及其用于生物样品检测的可行性,有些方法经改进可用于高通量检测生物样品体外致突变性.经典Ames实验受生物样品中组氨酸的影响,易产生假阳性结果,尽管经过修正可以排除组氨酸的干扰,但操作繁琐,不适合高通量检测.基于SOS反应的检测体系避开了组氨酸的影响,且简单易行,适合高通量检测:以β-半乳糖苷酶基因(lacZ)作为报告基因的检测体系灵敏度高,且经过离心洗涤或后培养的方式可降低样品颜色的影响;以绿色荧光蛋白(GFP)基因作为报告基因的检测体系避开了颜色的干扰,但这类方法灵敏度普遍不高,可以寻找信号更强的荧光蛋白以替代GFP;荧光素酶(lux)基因集lacZ和GFP的优点于一身,但检测时需要额外添加辅助因子,限制了其应用.也对单细胞凝胶电泳、tk基因突变实验、染色体损伤检测等方法进行了分析,有些适合生物样品高通量检测,但由于缺少国际通用的标准,很难推广使用.     

两种启动子对聚γ-谷氨酸降解酶基因在地衣芽胞杆菌中的加强表达效果

聚γ-谷氨酸(γ-PGA)是一种应用前景良好的生物高分子材料.比较了蔗糖诱导的枯草芽胞杆菌果聚糖蔗糖酶基因(SacB)启动子和地衣芽胞杆菌α-淀粉酶基因启动子对γ-PGA降解酶基因ywtD在地衣芽胞杆菌中加强表达的影响.分别用SacB基因启动子和α-淀粉酶启动子构建了穿梭表达载体pHY300-SYT和pHY300-PYT,通过电转化地衣芽胞杆菌WX-02获得重组子SYT和PYT.酶活测定结果显示SYT和PYT中γ-PGA降解酶基因ywtD得到加强表达,摇瓶发酵结果显示两个重组菌株的γ-PGA相对分子质量都由1 000 000~1 200 000降低为800 000~900 000,PYT的γ-PGA产量较对照菌株PLK提高了33%,由13.50 g L-1提高到17.97 g L-1,而SYT的γ-PGA产量则降低为10.85 g L-1.因此,α-淀粉酶启动子更适合于在地衣芽胞杆菌WX-02菌株中表达γ-PGA降解酶基因,从而获得高产低分子量γ-PGA的工程菌.     

Effects of cotton straw amendment on soil fertility and microbial communities

Maintaining soil fertility, while controlling pollution from excessive chemical fertilizer application is important for keeping soil productivity of sustainable agriculture. Variety of straws have been used and proven to be good soil amendments for increasing soil organic matter (OM) and a range of additional soil nutrients. However, little is known about the utilization of cotton straw for soil amendment. To better understand the mechanism behind cotton straw soil amendments, investigations were performed upon cucumber seedlings, where changes to soil nutrients and microbial communities were investigated. The results revealed that the cotton straw application promoted the cucumber seedling growth by significantly increasing the soil OM, available nitrogen, available phosphorus, and available potassium. The concentration of cotton straw was positively correlated to both the number of the culturable microorganisms and also the total microbial biomass within soil. Furthermore, assessment of cotton straw application using Biolog metabolic profiling and phospholipid fatty acid analysis revealed that such application increased the microbial community metabolic activity, and markedly changed the structure of microbial community. 16S rRNA gene clone library construction and phylogenetic analysis of soil bacteria revealed γ- Proteobacteria sequences dominated the cotton straw amendment soil, comprising 27.8% of the total number of analyzed sequences, while they were less represented in control soil (13.4%). On the contrary, the Sphingobacteria (7.8%) and Verrucomicrobia (2.4%) in the cotton straw amendment soil decreased after application when compared to the control soil 15.2% and 15.2%.     

不同虫压下转Bt基因水稻与非转基因水稻生态适合度差异

为了解转基因水稻的基因扩散效率和潜在生态风险,以转Bt抗虫水稻Bt63、R1、R2和非转基因常规水稻Ⅱ优838为试材,采用高、低两个不同虫害胁迫水平和转基因与非转基因水稻相间种植方式,通过观察水稻植株营养生长、结实以及对螟虫危害的抗性表现等差异,研究比较了Bt外源基因插入后对水稻植株适合度的影响.结果表明:在低虫害胁迫条件下,转Bt基因水稻在植株分蘖数、生物量鲜重等营养生长指标方面与非转基因对照品系间无明显差异,但株高、穗长、穗重等指标不及对照,且R2和Bt63与对照间差异显著;在高虫害胁迫条件下,3个转Bt基因水稻品系的分蘖数、穗长、穗重等指标明显高于对照.而不同转基因品系株高适合度效应不同,这可能与受体本身的特性相关.3种转基因水稻的单株结实粒数、千粒重与对照在两种虫害胁迫条件下均无显著性差异,Bt基因对受体植株的结实影响不明显.在高虫害胁迫条件下,3种转Bt基因水稻的抗虫能力均显著优于非转基因水稻,表明Bt基因对受体植株的抗虫性影响显著.同时,本研究结果还表明转Bt基因水稻的适合度代价较小,预示了抗虫转基因水稻外源Bt基因在一定环境条件下具有逃逸的可能,但这种风险比较小.     

油菜菌核病菌(Sclerotinia sclerotiorum)与细菌间的基因水平转移

油菜菌核病（Sclerotinia sclerotiorum）是油菜生产上最重要的病害之一,其致病性可能来源于基因水平转移（Horizontal gene transfer,HGT）.为认识其致病原理和寻找新的真菌抑制剂的靶点,首先通过BLASTp发现其基因XM₀01585458.1编码蛋白XP₀01585508.1与细菌比对结果中出现低E值3.23e-109和高SCORE值436,暗示存在HGT现象;进一步通过系统进化树的建立,发现该蛋白在进化分枝上更接近于细菌中由Streptomyces sp.C的NZ_CM000832.1基因编码的蛋白ZP₀7291173;同时核苷酸组成分析也发现该基因与油菜菌核病菌基因组的碱基组成有较大差别,GC含量提高了14.95%.这些结果证明了XM₀01585458.1的确存在基因水平转移事件.结构分析和COG蛋白功能分类显示该HGT序列编码蛋白XP₀01585508.1具有FA58C₃（Coagulation factors 5/8 type C domain）、Kelch repeat type 1、Galactose-binding domain-like、Galactose oxidase/kelch,beta-propeller等保守结构域,应为一个膜蛋白并参与多糖代谢,推测该水平转移基因与S.sclerotiorum在侵染植物时进行细胞壁水解和致病性有关.     

恒河猴piwil1基因的表达

为了解人类近亲恒河猴piwil1基因的结构、表达和功能差异,利用RT-PCR方法克隆了恒河猴piwil1基因,并对其编码产物进行了相应的生物信息学分析,随后检测了piwil1 mRNA在成年恒河猴10种组织中的表达情况,最后利用免疫组化方法比较了PIWIL1蛋白在成人、成年恒河猴和幼年恒河猴睾丸组织中表达的异同.结果表明,恒河猴piwil1基因全长2 586 bp,编码861个氨基酸,氨基酸数目与人类piwil1基因相同.恒河猴PIWIL1蛋白与人的PIWIL1蛋白序列同源性达99%,均含有PAZ结构域和Piwi结构域.在成人和成年恒河猴的睾丸组织中,PIWIL1蛋白均在精母细胞和精细胞的胞浆中表达,而在幼年恒河猴睾丸组织中,PIWIL1表达与成年恒河猴相比存在差异,表达量相对较低,且主要表达于生精小管的细胞的细胞核上.上述结果提示,PIWIL1蛋白在成人和成年恒河猴可能具有相同作用,但是在不同的发育阶段中PIWIL1蛋白的功能不同.     

Computer modeling of genome complexity variation trends in prokaryotic communities under varying habitat conditions

There are two types of organisms’ grouping in nature: mono-species populations and multi-species communities. Here at during the process of evolution the adaptability of a trait is to be tested both at population and ecocenotic levels. Size of a genome is one of the major adaptive traits, which widely varies in eukaryotic species. By contrast, prokaryotes with their small genomes are considered to have genome reduction evolutionary trend. Domination of this trend is mostly founded on population-level models. In this paper we in silico study interactions of ecocenotic and population levels. The trend of genome and metabolism reduction in prokaryotic communities was shown to be major only in comfortable environmental conditions. In subcomfortable conditions, genome and metabolism reduction leads to community simplification (in extreme case to community death). Pessimum conditions promote metabolism integration of a community and induce reciprocal genes acquiring.     

控释掺混肥对菜田土壤脲酶和氮转化功能基因影响及硝酸盐淋溶削减研究

以西蓝花为对象,研究了露地菜田不同施肥方式下土壤氮转化酶、氮转化功能基因及氮吸收量的差异,监测了西蓝花生育期内不同时期0～100 cm 土壤硝态氮含量动态变化.结果表明:①施氮处理(CF、CU80％和CU60％)土壤脲酶活性是缺氮处理(PK)的1.78～3.11倍,差异显著(p＜0.05),并且其AOA、AOB、nir...