An island biogeography approach for understanding changes in compositional similarity at present scenario of biotic homogenization

Local extinction of native species and colonization of non-native species are commonly invoked as responsible for changes in species similarity among biotas of different regions. In this study we used a model of species similarity between islands to assess the emergent, and unexplored, effects of changes in colonization by native species, extinction of non-native species, and propagule pressure on species similarity among insular communities. The model predicts that extinction probability of endemic species has a positive but asymptotic effect on species similarity, which is exacerbated by increasing colonization and reducing extinction of non-native species. Species similarity tends to increase with increasing colonization probability by non-native species, however this effect may be reduced, or even reverted, when the islands are exposed to an elevated number of non-native species that are prone to extinction, high levels of endemic species loss, and an initially large number of native species shared between islands. Species similarity was positively affected by the propagule pressure rate of non-native species only when their colonization and extinction probabilities were large and small enough, respectively. A negative effect of propagule pressure rate can be caused by an increase in the pool size of non-native species, which involves the introduction of different species into different islands, promoting biotic differentiation between islands. Our results indicate that the interactions between colonization, extinction and species pool lead to nonlinear responses and unexpected scenarios of biotic change. In order to validate model predictions, future research programs should focus on understanding the dynamics on such complex meta-communities where coexist native, non-native and endemic species.     

Impact of invasive mammal species on natural ecosystems: An example of the Prioksko-Terrasnyi Biosphere Reserve

On the basis of Annals of Nature of the Prioksko-Terrasnyi Biosphere Reserve, its colonization by invasive mammal species and the current state of their populations have been analyzed. In the mammal fauna of the reserve, 13 out of 60 species can be classified as invasive. They differ in the degree of impact on the biota. The house mouse, Norway and black rats, and European bison have virtually no effect on natural ecosystems; the effect of the muskrat, raccoon dog, American mink, red and axis deer is insignificant; and that of stray dogs and Tartarian roe deer is considerable. The European beaver and wild boar play an environment-forming role. The impact of beaver activities is strong but local, whereas activities of wild boars put into question the very possibility of conservation and analysis of representative biosphere areas and biological diversity in the reserve.     

Cladistic biogeographic analysis suggests an early Caribbean diversification in Mexico

The Great American Biotic Interchange has been the predominant paradigm for explaining biotic diversification in the Nearctic/Neotropical overlap or Mexican Transition Zone, which is commonly explained by the collision of the North and South American continental plates, which began in the Oligocene and fused both landmasses. In the most far-reaching cladistic biogeographical analysis of the area to date, evidence has been found supporting the existence of a remnant Caribbean region extending from eastern Mexico to southeastern USA, a hypothesis that challenges current views of the Great American Biotic Interchange and the Mexican Transition Zone. We show herein that an older terrane, which has drifted to the present day positions of Yucatan and Cuba, may be biogeographically linked to an early ‘Gondwanan’ biota of the Paleocene (ca. 60 Ma). The evidence indicates an east–west biotic divide in Mexico, existing before the collision and formation of Central America. The south–north division of the country, previously recognized by several authors as associated with the Great American Biotic Interchange and the Mexican Transition Zone, is of a younger age. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Evaluation of the ecological status with benthic indices in the coastal system： the case of Bohai Bay （China）

Based on biologic and environmental materials collected from coastal areas of Bohai Bay （China） in April, 2008, three biotic indices （AZTI＇s Marine Biotic Index （AMBI）, Shannon-Wiener Index and W-statistic） were applied together to evaluate the ecological status of the sampling area. The results showed a clear spatial gradient from a worse ecological status in the near-shore areas （especially around Haihe and Jiyun River Estuaries） to a better status in the offshore areas. While all the three indices could assist decision makers in visualizing spatial changes of organic pollutants in Bohai Bay, two indices, i. e., AMBI and Shannon-Wiener index, were effective in distinguishing sites from Haihe River Estuary, Jiyun River Estuary and other area. However, W-statistic can＇t tell the differences between estuaries and other area. It would be explained that organic pollutants and/or other environ- mental stresses in Bohai Bay were not strong enough to reduce the size ofmacrozoobenthos, which may cause both of the abundance and biomass curves crossed. To our knowledge, this is the first time that several benthic indices were used to assess the benthic ecological status in Bohai Bay, which gave the similar results. Furthermore, there is indication that the ecological status is related to excess input of wastewater along main rivers and outlets. In a word, AMBI, Shannon-Wiener Index and W-statistic could be able to assess the benthic ecological status of Bohai Bay under the organic pollutants pressure.     

Daphne: a new multimetric benthic index for the quality assessment of marine coastal environment in the Northern Adriatic Sea

A new benthic index, named Daphne, is proposed for the Northern Adriatic coastal area, near the Po river delta. It is based on six characteristics of the community that do not require in-depth taxonomic expertise: number of mollusc species, % of bivalves, % of polychaetes, abundance of the opportunistic species Corbula gibba, % of amphipods and number of ‘typical mollusc species’ that are individuated by multivariate analysis. The application of the index in selected stations along a gradient of decreasing disturbance shows that it is simple to use in regular monitoring campaigns and that the results are consistent with environmental quality data in the special conditions of this area subjected to considerable river runoff. The index can be used in addition and as a complement to more widespread indices (such as M-AMBI); a comparison of the two indices performance is discussed.     

Instream and offstream environmental conditions and stream biotic integrity: Importance of scale and site similarities for learning and prediction

Two different methods to predict biotic integrity were tested and compared in the present paper. The first one tries to predict the fish indices of biotic integrity (IBI) at the state or regional scale based on the most similar observations to a specific target site of interest using the simple to implement k-nearest neighbors (or kNN) method. Two different distance functions were considered to find the k-nearest neighbors: the Euclidean and the Mahalanobis. The second method was applied on the same datasets and consisted of a step-wise multiple regression. The two modeling approaches yielded similar results but kNN proved to be more time-efficient and very fast computationally for the given dataset sizes, which allowed applying a leave-one-out cross validation.In an attempt to reveal the importance of scale in the prediction of IBI, regression models were constructed at the state (or regional) scale and at the more refined cluster of sampling sites scale. Clusters of sites were extracted using Kohonen's self-organizing maps (SOM) followed by k-means clustering of the SOM neurons. Cluster-level regression models, constructed after site patterning, performed better in IBI prediction than global regression models constructed without any previous site patterning. The importance of identifying groups of sites with similar environmental characteristics affecting the IBI was revealed. The combined use of site patterning and regression modeling for IBI prediction also helped identifying important variables acting at the local scale which remain latent at the global scale.     

Gaseous mercury emissions from unsterilized and sterilized soils: The effect of temperature and UV radiation

Mercury (Hg) emissions from the soils taken from two different sites (deciduous and coniferous forests) in the Adirondacks were measured in outdoor and laboratory experiments. Some of the soil samples were irradiated to eliminate biological activity. The result from the outdoor measurements with different soils suggests the Hg emission from the soils is partly limited by fallen leaves covering the soils which helps maintain relatively high soil moisture and limits the amount of heat and solar radiation reaching the soil surface. In laboratory experiments exposure to UV-A (365 nm) had no significant effect on the Hg emissions while the Hg emissions increased dramatically during exposure to UV-B (302 nm) light suggesting UV-B directly reduced soil-associated Hg. Overall these results indicate that for these soils biotic processes have a relatively constant and smaller influence on the Hg emission from the soil than the more variable abiotic processes.     

有害废物堆肥技术及堆肥生态系统研究进展

介绍了现代堆肥技术的特点及发展，近年在堆肥生态系统的研究表明，除去在堆肥中起重要作用的微生物学过程及生物因子外，非生物因子的作用也不容忽视。影响微生物活性和对堆肥反应速率起作用的非生物因子有温度，水分含量，通风供氧，ｐＨ毒物初始浓度，有机质含量和碳氮比等。     

Examining the colonization process of exotic species varying in competitive abilities using a cellular automaton model

Current threats of invasive species have significant implications for ecological systems. Given their potential impacts, invasive species have been the subject of extensive empirical and theoretical studies. However, these studies have tended to focus on species that produce highly visible ecological and economic impacts. In our study, we take a step back from focusing on these high-impact invasive species, and examine the general colonization (invasion) process of exotic species that have various “competitive abilities” against the native species. Using a two-species cellular automaton model, we demonstrate that: (1) a threshold level of competitive ability is required for the exotic species to successfully establish in a new landscape and (2) an exotic species with superior competitive ability does not necessarily become dominant in a landscape (alternatively, a species that has inferior competitive ability may successfully colonize a new system). Our findings have significant implications for the study of species invasions and also provide clues to how species assemble in ecological communities.