Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats

Conservation and management of marine biodiversity depends on biomonitoring of marine habitats, but current approaches are resource-intensive and require different approaches for different organisms. Environmental DNA (eDNA) extracted from water samples is an efficient and versatile approach to detecting aquatic animals. In the ocean, eDNA composition reflects local fauna at fine spatial scales, but little is known about the effectiveness of eDNA-based monitoring of marine communities at larger scales. We investigated the potential of eDNA to characterize and distinguish marine communities at large spatial scales by comparing vertebrate species composition among marine habitats in Qatar, the Arabian Gulf (also known as the Persian Gulf), based on eDNA metabarcoding of seawater samples. We conducted species accumulation analyses to estimate how much of the vertebrate diversity we detected. We obtained eDNA sequences from a diverse assemblage of marine vertebrates, spanning 191 taxa in 73 families. These included rare and endangered species and covered 36% of the bony fish genera previously recorded in the Gulf. Sites of similar habitat type were also similar in eDNA composition. The species accumulation analyses showed that the number of sample replicates was insufficient for some sampling sites but suggested that a few hundred eDNA samples could potentially capture >90% of the marine vertebrate diversity in the study area. Our results confirm that seawater samples contain habitat-characteristic molecular signatures and that eDNA monitoring can efficiently cover vertebrate diversity at scales relevant to national and regional conservation and management.     

Integrating Remote Sensing Approach with Pollution Monitoring Tools for Aquatic Ecosystem Risk Assessment and Managment: A Case Study of Lake Victoria(UGANDA)

Aquatic ecosystems around the world, lake, estuaries and coastal areas are increasingly impacted by anthropogenic pollutants through different sources such as agricultural, industrial and urban discharges, atmospheric deposition and terrestrial drainage. Lake Victoria is the second largest lake in the world and the largest tropical lake. Bordered by Tanzania, Uganda, and Kenya, it provides a livelihood for millions of Africans in the region. However, the lake is under threat from eutrophication, a huge decline in the number of native fish species caused by several factors including loss of biodiversity, over fishing and pollution has been recently documented. Increasing usage of pesticides and insecticides in the adjacent agricultural areas as well as mercury contamination from processing of gold ore on the southern shores are currently considered among the most emergent phenomena of chemical contamination in the lake. By the application of globally consistent and comprehensive geospatial data-sets based on remote sensing integrated with information on heavy metals accumulation and insecticides exposure in native and alien fish populations, the present study aims at assessing the environmental risk associated to the contamination of the Lake Victoria water body on fish health, land cover distribution, biodiversity and the agricultural area surrounding the lake. By the elaboration of Landsat 7 TM data of November 2002 and Landsat 7 TM 1986 we have calculated the agriculture area which borders the Lake Victoria bay, which is an upland plain. This process has greatly enhanced nutrient loading to the soil, which is subsequently transported to the lake by rain or as dry fall. All the data has been insert in the Geographical information System (ARCGIS) to be upgraded and consulted. Heavy metals in fish fillets showed concentrations rather low except for mercury being higher than others as already described in previous investigations. In the same tissue, cholinesterases activity (ChE) as an indicator of insecticides exposure showed significant differences among fish species in both activity and sensitivity of selected inhibitor insecticides. This integrated approach aims at identifying and quantifying selected aquatic environmental issues which integrated with monitoring techniques such as contaminant concentrations and biological responses to insecticides exposure in fish populations will provide a scientific basis for aquatic zones management and assist in policy formulations at the national and international levels.     

The dynamic changes of arsenic biotransformation and bioaccumulation in muscle of freshwater food fish crucian carp during chronic dietborne exposure

Dietary uptake is the major way that inorganic arsenic (iAs) enters into benthic fish; however, the metabolic process of dietborne iAs in fish muscle following chronic exposure remains unclear. This was a 40-day study on chronic dietborne iAs [arsenite (AsIII) and arsenate (AsV)] exposure in the benthic freshwater food fish, the crucian carp (Carassius auratus), which determined the temporal profiles of iAs metabolism and toxicokinetics during exposure. We found that an adaptive response occurred in the fish body after iAs dietary exposure, which was associated with decreased As accumulation and increased As transformation into a non-toxic As form (arsenobetaine). The bioavailability of dietary AsIII was lower than that of AsV, probably because AsIII has a lower ability to pass through fish tissues. Dietary AsV exhibited a high potential for transformation into AsIII species, which then accumulated in fish muscle. The largely produced AsIII considered more toxic at the earlier stage of AsV exposure should attract sufficient attention to human exposure assessment. Therefore, the pristine As species and exposure duration had significant effects on As bioaccumulation and biotransformation in fish. The behavior determined for dietborne arsenic in food fish is crucial for not only arsenic ecotoxicology but also food safety.     

Fish mercury increase in Lago Manso, a new hydroelectric reservoir in tropical Brazil

It has been frequently demonstrated that mercury (Hg) concentrations in fish rise in newly constructed hydroelectric reservoirs in the Northern Hemisphere. In the present work, we studied whether similar effects take place also in a tropical upland reservoir during impoundment and discuss possible causes and implications. Total Hg concentrations in fish and several soil and water parameters were determined before and after flooding at Rio Manso hydroelectric power plant in western Brazil. The Hg concentrations in soil and sediment were within the background levels in the region (22-35 ng g(-1) dry weight). There was a strong positive correlation between Hg and carbon and sulphur in sediment. Predatory fish had total Hg concentrations ranging between 70 and 210 ng g(-1) f.w. 7 years before flooding and between 72 and 755 ng g(-1) f.w. during flooding, but increased to between 216 and 938 ng g(-1) f.w. in the piscivorous and carnivorous species Pseudoplatystoma fasciatum, cachara, and Salminus brasiliensis, dourado, 3 years after flooding. At the same time, concentrations of organic carbon in the water increased and oxygen concentrations decreased, indicating increased decomposition and anoxia as contributing to the increased Hg concentrations in fish. The present fish Hg concentrations in commonly consumed piscivorous species are a threat to the health of the population dependent on fishing in the dam and downstream river for sustenance. Mercury exposure can be reduced by following fish consumption recommendations until fish Hg concentrations decrease to a safe level.     

松花江野生鱼类重金属残留分析与评价

以松花江流域的野生鱼类为研究对象,在松花江流域选取松林、大顶子山、佳木斯3个具有代表性的点位,在2014—2016年的每年5月底6月初采集鲤鱼和鲫鱼样品,3年内共制备45个鲤鱼单样,44个鲤鱼混样,30个鲫鱼混样,共计119个。采用电感耦合等离子体-质谱法对鱼类肌肉组织中残留的As、Cd、Cr、Pb、Hg 5种重金属进行检测。检测结果显示,As、Cd、Cr、Pb、Hg 5种重金属全部检出,检测结果全部达标,达标率为100%。根据检测结果采用单因子指数法和金属污染指数法等评价了松花江流域鱼体重金属残留状况及食用安全性,评价结果为松花江流域鱼类重金属残留量相对较少,鱼体健康,食用安全。     

我国4种重要海水经济鱼类热忍受研究

为了探明我国重要海水经济鱼类的热忍受能力,分别采用急性升温和缓慢升温两种方法对大黄鱼Pseudosciaena crocea、鲈鱼Lateolabrax joponicus、真鲷Pagrosomus major、黑鲷Sparus macrocephalus进行了室内热效应模拟实验.研究结果表明:在夏季自然起始水温为28.5℃条件下,大黄鱼,鲈鱼和黑鲷的急性升温半致死温度(LT50)分别为34.2,33.9和36.4℃;大黄鱼,鲈鱼,真鲷和黑鲷的临界热最大值(critical thermal maxima,CTmax)分别为35.0,34.7,32.7和36.8℃.     

Bioaccumulation of heavy metals in fishes from Taihu Lake, China

The Cr,Zn,Cu,Cd,Pb contents were determined in Cyprinus carpio Linnaeus,Carassius auratus Linnaeus,Hypophthalmichthys molitrix and Aristichthys nobilis,which were caught from Meiliang Bay,Taihu Lake,a large,shallow and eutrophic lake of China.The results showed that:(1)the Cr,Cu,Pb,Cd contents in the edible parts of the four fish species were much lower than Chinese Food Health Criterion(1994),but the Zn contents were higher than the Criterion;(2)Cd contents were the highest in the liver of fish,Pb contents were almost the same in all organs of fish,Cr contents mainly enriched in the skin and gonads,Zn contents were the highest in the gonad(♀),and Cu contents were the highest in the liver;(3)the total metal accumulation was the greatest in the liver and the lowest in the muscle.The total metal accumulation was the highest in C.auratus L.This investigation indicated that fish products in Taihu Lake were still safe for human consumption,but the amount consumed should be controlled under the Chinese Food Health Criterion to avoid excessive intake of Zn.     

黑水河下游鱼类资源现状及其保护措施

为了解白鹤滩蓄水运行前黑水河下游鱼类资源的现状、受到的主要威胁及其保护措施,于2014年1~12月在黑水河下游干支流江段采用电捕法进行了渔获物调查。结果显示:12个月共调查发现鱼类28种,隶属于3目8科23属,其中喜流水生境、产粘沉性卵、以着生藻类或/和底栖动物为食物的鱼类种类较多;调查区域鱼类个体规格普遍较小,其中齐口裂腹鱼Schizothorax prenanti、短体副鳅Paracobitis potanini、红尾副鳅Paracobitis varigatus、短须裂腹鱼Schizothorax wangchiachii、前鳍高原鳅Triplophysa anterodorsalis、中华纹胸鮡Glyptothorax sinense和凹尾拟鲿Pseudobagrus emarginatus为调查区域的主要经济鱼类;上半年和下半年的渔获物结构在统计学上差异显著(R=0.81,p=0.1%0.05),鱼类在金沙江干流和黑水河下游之间的相互迁徙比较明显;CPUE呈现先波动下降然后逐月上升的趋势,其中10月份的CPUE最低;丰度生物量比较曲线显示2014年各月的渔获物结构均处于严重干扰状态。黑水河下游河道采砂以及过度捕捞是白鹤滩蓄水前影响黑水河下游鱼类资源的主要因素,建议通过控制采砂的江段、采砂的时间以及全面禁捕保护该区域的鱼类资源。     

巢湖流域河流鱼类群落的时空分布

基于2013年4月和10月对巢湖流域66个河道样点的调查数据,初步研究了巢湖流域河流鱼类群落的时空变化特征。主要研究结果显示,鱼类多样性无显著性的水系间、生态分区间的变化,但随季节和河流级别显著变化:10月份的个体数显著高于4月份,2级河流的物种数和个体数均显著大于1级、3级和4级河流。鱼类群落结构的季节动态显著,随生态分区显著变化,但不受水系、河流级别的显著影响。在二级生态分区水平上,仅西南森林生态亚区的鱼类群落结构与其他5个生态亚区的显著差异;宽鳍鱲、吻虾虎鱼等在西南森林生态亚区具有更高多度,而鲫、鰐、鲤等物种在其他生态亚区多度更高。     

Patterns of selectiveness in the Amazonian freshwater fisheries: implications for management

Tropical fisheries, which are considered multi-species, may show selectiveness. We analyzed the degree of selectivity of fish catches in 46 sites along the Amazon basin through the percentage of biomass corresponding to the most caught fish species. Amazonian fisheries were considered moderately selective, as 54% of the sites directed more than a quarter of fishing effort to one fish species and in 87% of the sites more than half the fishing effort was directed to five fish species. Commercial fisheries were more selective than subsistence fisheries. Eleven fish species (nine of them migratory) have received more fishing pressure in the studied Amazonian regions and the catch composition differed among regions. We thus recommend that fisheries management in the Amazon basin should distribute fishing effort among more fish species; incorporate the particularities of commercial and subsistence fisheries; evaluate fishing effects on ecosystem services; and consider the biological characteristics of preferred fish.