Using the ECLPSS software environment to build a spatially explicit component-based model of ozone effects on forest ecosystems

We have developed a modeling framework to support grid-based simulation of ecosystems at multiple spatial scales, the Ecological Component Library for Parallel Spatial Simulation (ECLPSS). ECLPSS helps ecologists to build robust spatially explicit simulations of ecological processes by providing a growing library of reusable interchangeable components and automating many modeling tasks. To build a model, a user selects components from the library, and then writes new components as needed. Some of these components represent specific ecological processes, such as how environmental factors influence the growth of individual trees. Other components provide simulation support such as reading and writing files in various formats to allow inter-operability with other software. The framework manages components and variables, the order of operations, and spatial interactions. The framework provides only simulation support; it does not include ecological functions or assumptions. This separation allows biologists to build models without becoming computer scientists, while computer scientists can improve the framework without becoming ecologists. The framework is designed to operate on multiple platforms and be used across networks via a World Wide Web-based user interface. ECLPSS is designed for use with both single processor computers for small models, and multiple processors in order to simulate large regions with complex interactions among many individuals or ecological compartments. To test Version 1.0 of ECLPSS, we created a model to evaluate the effect of tropospheric ozone on forest ecosystem dynamics. This model is a reduced-form version of two existing models: , which represents an individual tree, and , which represents forest stand growth and succession. This model demonstrates key features of ECLPSS, such as the ability to examine the effects of cell size and model structure on model predictions.     

A model testing study for the transfer of radioactivity to fruit

This paper compares predictions of the foodchain model SPADE with experimental data for the transfer of (134)Cs and (85)Sr to strawberry plants following acute foliar and soil contamination. The transfer pathways considered in this exercise included direct deposition to fruit, leaf-to-fruit, soil-to-leaf and soil-to-fruit transfers. Following foliar contamination, the difference between predicted and measured radionuclide activity values varied between a factor of 0.5-10 for fruit and 4.5-7 for leaf. Following soil contamination, the difference between predicted and measured values varied between a factor of 3-74 for fruit and 32-44 for leaf. In all cases the difference between measured and predicted values was smaller for (85)Sr than (134)Cs. Measured and predicted activities were higher for leaf than fruit. Both measured and predicted (134)Cs concentrations in fruit and leaf are higher when deposition occurs at ripening than at anthesis. These results confirm the need for more data on fruit, even for Cs and Sr, to support models in predicting the transfer of radionuclides to fruit crops. Ongoing research projects funded by the UK Food Standards Agency aim to provide some data on radionuclide transfer to herbaceous, shrub and tree fruits, which will help improve radiological assessment models in order to provide better protection for consumers.     

Multiresource simulation for wildland management

The model presented here is a simulation of the watershed of the Little South Fork of the Cache la Poudre River system located in the Front Range of the Rocky Mountains of Colorado. This simulation model, TERRA, provides information of resource interactions, ecosystem processes, and harvest ramifications for this watershed. The information is generated through sets of difference equations to represent process flows. The model has a modular design that separates the ecologic processes—weather conditions, hydrologic functions, forage and timber production, wildlife and domestic population dynamics, recreation use, and management activities—from the simulation planning overhead—updating, plotting, and printing.The model is designed such that the output is readily usable information for an allocation model and the decision-making process. This is accomplished by allowing different levels of specified management activities as input and producing responses and output on a per unit land area basis.This simulation is a useful research tool for estimating parameter and variable values and levels of management-resource interaction. Lack of a pertinent field data base inhibits the model from actually being used as a management tool in the planning process.Submitted for publication as Paper No. 1217 in the Journal Series of the Agricultural Experiment Station, University of Florida.     

Soil organic carbon dynamics of croplands in European Russia: estimates from the “model of humus balance”

The Model of Humus Balance was used to estimate the influence of climate effects and changing agricultural practices on carbon (C) levels in soddy–podzolic soils in the Russian Federation for the years 2000–2050. The model was linked with a spatial database containing soil, climate and farming management layers for identification of spatial change of C sequestration potential. Analysis of relationships between C, soil texture and climate indicated that compared with a business-as-usual scenario, adaptation measures could increase the number of polygons storing soil organic carbon (SOC) by 2010–2020. The rate of possible C loss is sensitive to the different climate scenarios, with a maximum potential for SOC accumulation expected in 2030–2040, thereafter decreasing to 2050. The effect is most pronounced for the arid part of the study area under the emission scenario with the highest rate of increase in atmospheric CO₂ concentration, supporting findings from the dynamic SOC model, RothC. C sequestration during the study period was permanent for clay and clay loam soils with a C content of more than 2%, suggesting that C sequestration should be focused on highly fertile, fine-textured soils. We also show that spatial heterogeneity of soil texture can be a source of uncertainty for estimates of SOC dynamics at the regional scale. Figures in color are available at     

Rethinking receiver operating characteristic analysis applications in ecological niche modeling

The area under the curve (AUC) of the receiver operating characteristic (ROC) has become a dominant tool in evaluating the accuracy of models predicting distributions of species. ROC has the advantage of being threshold-independent, and as such does not require decisions regarding thresholds of what constitutes a prediction of presence versus a prediction of absence. However, we show that, comparing two ROCs, using the AUC systematically undervalues models that do not provide predictions across the entire spectrum of proportional areas in the study area. Current ROC approaches in ecological niche modeling applications are also inappropriate because the two error components are weighted equally. We recommend a modification of ROC that remedies these problems, using partial-area ROC approaches to provide a firmer foundation for evaluation of predictions from ecological niche models. A worked example demonstrates that models that are evaluated favorably by traditional ROC AUCs are not necessarily the best when niche modeling considerations are incorporated into the design of the test.     

基于灰色-马尔科夫模型的我国能源消费结构优化调整

本文以我国1997—2010年的消费结构数据为基础,运用灰色-马尔科夫链模型对数据进行了分析和预测,然后通过MATLAB预测了我国未来十年的能源消费结构,结合我国政府承诺的非化石能源目标对模型预测结果做了进一步的修正,最后根据能源发展趋势给出了能源消费结构的优化策略。     

基于优化方法的区域疏散路径规划研究

由于各种灾害的频频发生,对于区域整体及局部的疏散规划方案的研究具有迫切性和必要性。基于传统的迪杰斯特拉算法和回溯法的思想,对矩阵化的地图信息进行处理和计算,得到满足最大疏散人数、总体最短疏散路径、最短疏散时间等优化条件的优化方案。最后将这种方法运用到实际中,得出了某大学校区的路径选择方案。     

Application of a hydroxylamine nitrate stability model to plutonium purification process equipment

A mathematical model that predicts hydroxylamine nitrate (HAN) (NH₂OH·HNO₃) stability is applied to aqueous solutions containing HAN, nitric acid and plutonium that are used in plutonium purification processes. The model estimates the stability of these solutions with respect to the rapid, hazardous, autocatalytic reaction of HAN with nitric acid that generates heat and gas. It also accounts for reaction kinetics, temperature changes, gas generation rates, solution volumes and flow rates, and distribution of plutonium and nitric acid between aqueous and organic phases. The model is applied to three typical process vessels used in solvent extraction purification of plutonium – a countercurrent aqueous/organic plutonium stripping column, an oxidation column used for HAN and hydrazine destruction, and a plutonium rework tank. Both normal and off-normal process scenarios are modeled. Two of the off-normal scenarios lead to the rapid autocatalytic reaction of HAN with nitric acid where heat and gas are generated and that could lead to damage of the process equipment and/or release of hazardous plutonium solution from the vessel. In these two cases, stationary aqueous solutions containing HAN, Pu(III), and nitric acid were allowed to slowly react until conditions for the autocatalytic reaction were reached.     

连续流动法测定沉积物中的酸挥发性硫化物

优化沉积物中酸挥发性硫化物(Acid Volatile Sulfide,AVS)的提取方法并采用连续流动分析法检测提取液中的硫化物.研究了吸收液的种类、氮气流量与吹气的时间和反应温度对AVS提取效果的影响以优化提取方法.结果表明,与传统的氢氧化钠或硫酸镉-氢氧化钠吸收液相比,以氯化锌-羧甲基纤维素钠溶液为吸收液吸附效率好,稳定性高且无毒.用连续流动分析法检测提取液中的AVS快速、准确、稳定性好.