Film mulching reduces antibiotic resistance genes in the phyllosphere of lettuce

Phyllosphere is an important reservoir of antibiotic resistance genes(ARGs), but the transfer mechanism of ARGs from soil and air to phyllosphere remains unclear. This study demonstrated that soil-air-phyllosphere was the dominant ARG transfer pathway, and blocking it by film mulching can reduce typical phyllosphere ARGs in lettuce by 80.7%-98.7%(89.5% on average). To further eliminate phyllosphere ARGs in lettuce grown with film mulching, the internal soil-endosphere-phyllosphere transfer pathw...     

微生物降解苯胺的特性及其降解代谢途径

从活性污泥中分离得到的一株细菌 Ａ Ｎ３ ,能以苯胺为唯一碳、氮源和能源生长,苯胺的最高降解浓度５０００ ｍｇ／ Ｌ 以上,鉴定为食酸丛毛单胞菌（ Ｃｏｍａｍｏｎａｓ ａｃｉｄｏｖｏｒａｎｓ） ． Ａ Ｎ３ 还可降解乙酰苯胺,但不利用其他取代类苯胺,该菌株的生长细胞和完整细胞降解苯胺的最适ｐ Ｈ７ ．０ ,最适温度３０ ℃,且完整细胞降解苯胺的活性比生长细胞高得多．９ 种金属离子对该菌株的生长细胞和完整细胞降解苯胺均有不同程度的抑制作用,尤以 Ａｇ ＋ 和 Ｈｇ２ ＋ 为明显． Ａ Ｎ３ 含有苯胺加双氧酶、邻苯二酚２ ,３加双氧酶等一系列与苯胺降解有关的酶类,它们均为诱导酶．对苯胺降解的关键酶进行了酶动力学特性的研究,根据这些结果提出了该菌株降解苯胺的代谢途径．     

Ozonation of aromatic monomer compounds in water: factors determining reaction outcomes

● p- CNB and IBP were selected, to explore factors determining ozonation outcomes. ● •OH contributed only 50 % to IBP removal, compared to the 90 % for p -CNB removal. ● IBP achieved fewer TOC removal and more by-product types and quantities. ● A longer ring-opening distance existed during the degradation of IBP. ● Multiple positions on both branches of IBP were attacked, consuming more oxidants. For aromatic monomer compounds (AMCs), ozonation outcomes were usually predicted by the substituents of the benzene ring based on the electron inductive effect. However, the predicted results were occasionally unreliable for complex substituents, and other factors caused concern. In this study, p-chloronitrobenzene (p-CNB) and ibuprofen (IBP) were selected for ozonation. According to the electron inductive theory, p-CNB should be less oxidizable, but the opposite was true. The higher rates of p-CNB were due to various sources of assistance. First, the hydroxyl radical (•OH) contributed 90 % to p-CNB removal at pH 7.0, while its contribution to IBP removal was 50 %. Other contributions came from molecular O₃ oxidation. Second, p-CNB achieved 40 % of the total organic carbon (TOC) removal and fewer by-product types and quantities, when compared to the results for IBP. Third, the oxidation of p-CNB started with hydroxyl substitution reactions on the benzene ring; then, the ring opened. However, IBP was initially oxidized mainly on the butane branched chain, with a chain-shortening process occurring before the ring opened. Finally, the degradation pathway of p-CNB was single and consumed fewer oxidants. However, both branches of IBP were attacked simultaneously, and three degradation pathways that relied on more oxidants were proposed. All of these factors were determinants of the rapid removal of p-CNB.     

Time-dependent metabolomics uncover dynamic metabolic adaptions in MCF-7 cells exposed to bisphenol A

● Metabolomic temporal profiling of cells exposed to xenobiotics. ● Global metabolome dysregulation patterns with time-resolved landscapes. ● Synchronized regulation behavior and specific dysregulation sensitivity. ● Temporal metabolic adaptions indicated cellular emphasis transition. The biochemical consequences induced by xenobiotic stress are featured in dose-response and time-resolved landscapes. Understanding the dynamic process of cellular adaptations is crucial in conducting the risk assessment for chemical exposure. As one of the most phenotype-related omics, metabolome in response to environmental stress can vary from seconds to days. Up to now, very few dynamic metabolomics studies have been conducted to provide time-dependent mechanistic interpretations in understanding xenobiotics-induced cellular adaptations. This study aims to explore the time-resolved metabolite dysregulation manner and dynamically perturbed biological functions in MCF-7 cells exposed to bisphenol A (BPA), a well-known endocrine-disrupting chemical. By sampling at 11 time points from several minutes to hours, thirty seven significantly dysregulated metabolites were identified, ranging from amino acids, fatty acids, carboxylic acids and nucleoside phosphate compounds. The metabolites in different pathways basically showed distinct time-resolved changing patterns, while those within the common class or same pathways showed similar and synchronized dysregulation behaviors. The pathway enrichment analysis suggested that purine metabolism, pyrimidine metabolism, aminoacyl-tRNA biosynthesis as well as glutamine/glutamate (GABA) metabolism pathways were heavily disturbed. As exposure event continued, MCF-7 cells went through multiple sequential metabolic adaptations from cell proliferation to energy metabolism, which indicated an enhancing cellular requirement for elevated energy homeostasis, oxidative stress response and ER-α mediated cell growth. We further focused on the time-dependent metabolite dysregulation behavior in purine and pyrimidine metabolism, and identified the impaired glycolysis and oxidative phosphorylation by redox imbalance. Lastly, we established a restricted cubic spline-based model to fit and predict metabolite’s full range dysregulation cartography, with metabolite’ sensitivity comparisons retrieved and novel biomarkers suggested. Overall, the results indicated that 8 h BPA exposure leaded to global dynamic metabolome adaptions including amino acid, nucleoside and sugar metabolism disorders, and the dysregulated metabolites with interfered pathways at different stages are of significant temporal distinctions.     

Mercury exposure in the freshwater tilapia Oreochromis niloticus

Mercury (Hg) can be strongly accumulated and biomagnified along aquatic food chain, but the exposure pathway remains little studied. In this study, we quantified the uptake and elimination of both inorganic mercury [as Hg(II)] and methylmercury (as MeHg) in an important farmed freshwater fish, the tilapia Oreochromis niloticus, using ²⁰³Hg radiotracer technique. The dissolved uptake rates of both mercury species increased linearly with Hg concentration (tested at ng/L levels), and the uptake rate constant of MeHg was 4 times higher than that of Hg(II). Dissolved uptake of mercury was highly dependent on the water pH and dissolved organic carbon concentration. The dietborne assimilation efficiency of MeHg was 3.7-7.2 times higher than that of Hg(II), while the efflux rate constant of MeHg was 7.1 times lower. The biokinetic modeling results showed that MeHg was the greater contributor to the overall mercury bioaccumulation and dietary exposure was the predominant pathway.     

Characterization of the first step involved in enzymatic pathway for microcystin-RR biodegraded by Sphingopyxis sp. USTB-05

Enzymes encoded by genes biodegrading microcystins (MCs) can help reveal the function of genes and biodegradation pathway of MCs. Here the first and important gene (USTB-05-A, 1,008 bp) involved in biodegradation of microcystin-RR (MC-RR) was cloned from Sphingopyxis sp. USTB-05 and firstly expressed in Escherichia coli BL21 (DE3) with an expression vector of pGEX4T-1 successfully. The nucleotide sequences of cloned USTB-05-A possessed 92.5% homology to that of mlA reported in Sphingomonas sp. strain ACM-3962. The deduced amino acid sequences containing the cleavage sites of 26th (alanine) and 27th (leucine) showed 83% identical to that of MlrA. The cell-free extract (CE) of recombinant E. coli BL21 (DE3) containing USTB-05-A had high activity for biodegrading MC-RR. Initial MC-RR of 40 mg L⁻¹ was completely biodegraded under total protein of 350 mg L⁻¹ within 0.25 h. A product derived from MC-RR appeared distinctly with the decrease of MC-RR peak on the profile of HPLC. The product (m/z 1056.5) had molecular weight of 18 higher than that of MC-RR (m/z 1038.7). The findings provided the positive evidences that biodegradation of MC-RR began with the breakage of cyclic MC-RR and then it was converted to linear MC-RR as the first product catalyzed by first enzyme of Sphingopyxis sp. USTB-05.     

Decomposition of 2,2',4,4',5,5'-hexachlorobiphenyl with iron supported on an activated carbon from an ion-exchange resin

An activated carbon (AC) containing a high concentration (374 mg g⁻¹) of Fe was prepared by carbonization of an ion-exchange resin. To examine its chemical reactivity as a catalyst to decompose 2,2′,4,4′,5,5′-hexachlorobiphenyl (PCB-153), the decomposition parameters of temperature and time were varied under air or N₂. Decomposition at 350 °C was achieved within 15 min under air and 30 min under N₂, and the efficiency of PCB-153 decomposition was 99.7% and 98.0%, respectively. An analysis of inorganic chloride ions revealed that PCB-153 was mineralized effectively during the decomposition. The Brunauer-Emmett-Teller (BET) surface area and pore volume of the AC were measured to assess the adsorption capacity before and after the decomposition. The differences between decomposition under air and N₂ reflected the differences in the BET surface and pore volume measurements. A decomposition pathway was postulated, and the reactive characteristics of chlorine atoms loaded on the benzene rings followed the order of para > meta > ortho, which agrees with the calculated results from a density functional theory study.     

Accumulation of hydroxylated polychlorinated biphenyls (OH-PCBs) and implications for PCBs metabolic capacities in three porpoise species

The present study investigated polychlorinated biphenyls (PCBs) and hydroxylated metabolites of PCBs (OH-PCBs) in blood from three porpoise species: finless porpoises (Neophocaena phocaenoides), harbor porpoises (Phocoena phocoena), and Dall’s porpoises (Phocoenoides dalli). The porpoises were found stranded or were bycaught along the Japanese coast. Concentrations of OH-PCB were the highest in Dall’s porpoises (58 pg g⁻¹ wet wt), second highest in finless porpoises (20 pg g⁻¹ wet wt), and lowest in harbor porpoises (8.3 pg g⁻¹ wet wt). The concentrations in Dall’s porpoises were significantly higher than the concentrations in finless porpoises and harbor porpoises (p < 0.05 and p < 0.01, respectively). There was a positive correlation between PCB and OH-PCB concentrations (r = 0.67, p < 0.001), suggesting the possible concentration-dependent induction of CYP enzymes. The three porpoise species may have exceptionally low metabolic capacities compared with other marine and terrestrial mammals, because low OH-PCB/PCB concentration ratios were found, which were 0.0016 for Dall’s porpoises, 0.0013 for harbor porpoises, and 0.00058 for finless porpoises. Distinct differences in the OH-PCB congener patterns were observed for the three species, even though they are taxonomically closely related.     

SBR单级自养脱氮系统氮素转化途径

利用氮素计量关系和批式实验研究了SBR系统中基于短程硝化的单级自养脱氮特性和脱氮途径。结果表明,SBR系统获得良好脱氮效果,TN最高去除负荷和去除速率分别达0.49 kg N/(m3.d)和0.20 kg N/(kg VSS.d);系统中82%的氨氮转化成气体脱除,10%的氨氮转化成硝酸盐氮。批式实验结果表明,SBR系统中的污泥同时具有厌氧氨氧化、亚硝酸盐氧化和自养反硝化活性,三者的反应速率分别为0.12 kg NH4+-N/(kg VSS.d)、0.04 kg NO2--N/(kg VSS.d)和0.03 kg NO2--N/(kg VSS.d)。综上,SBR系统中氮的脱除是短程硝化、厌氧氨氧化和反硝化共同作用的结果,产生的硝酸盐是厌氧氨氧化和硝化作用所致。