Mini Review: Probes for Detecting Prymnesium parvum and Preliminary Results From Gene Expression Studies1

Medlin, Linda K., Sonja Diercks, and Sara Beszteri, 2010. Mini Review: Probes for Detecting Prymnesium parvum and Preliminary Results From Gene Expression Studies. Journal of the American Water Resources Association (JAWRA) 46(1):144-152. DOI: 10.1111/j.1752-1688.2009.00398.x Abstract: Prymnesium parvum is common in brackish and marine coastal waters within temperate zones, world-wide. P. parvum forms recurrent blooms causing fish kills in many parts of the world. Harmful blooms are formed in nutrient rich, low salinity lakes, ponds, river systems, or estuaries. Probes made to this species and to the genus Prymnesium have been tested in dot blot and fluorescent in situ hybridization (FISH) and used with a solid-phase cytometer using a tyramide signal amplification (TSA) enhanced FISH hybridization to provide a means to identify the cells before blooms develop with automated counting. Field counts from light microscopy have been compared with solid-phase cytometer counts. Additional detection systems, such as biosensors and microarrays, have also been developed to identify rapidly this species without resorting to electron microscopy. Advantages and disadvantages of each detection system are discussed. A study of the genes expressed by P. parvum under environmental conditions that can induce blooms or stress was undertaken to try to understand the ecology behind toxic blooms.     

Prenatal identification of small mosaic markers of different chromosomal origins

In situ hybridization using a series of alphoid DNA probes has demonstrated the origin of two small accessory mosaic marker chromosomes ascertained from 1079 amniocenteses. These markers appeared to be de novo, derived from acrocentric chromosomes, and identical by traditional cytogenetic staining (G, Q, C, AgNOR, Hoechst-distamycin). Molecular characterization showed that one marker had originated from chromosome 14, the other from chromosome 22. Clinical outcome in both cases was normal.     

Prenatal identification of a Y-chromosome deletion by Y-specific single copy DNA probes

A sex chromosome deletion was identified in the course of prenatal diagnosis for maternal age. Ultrasound pictures revealed male fetal sex and a comparison with the father's Y chromosome suggested that the altered chromosome might be a de novo deletion of the Y chromosome. DNA hybridization with five human Y-specific probes shows that, among the Y-specific sequences recognized by the probes, only two of them are absent. The normal infant, at birth, was mosaic 46, XYq- /46,XY.     

Early prenatal diagnosis of 21-hydroxylase deficiency using amniotic fluid 17-hydroxyprogesterone determination and DNA probes

The results of early prenatal diagnoses of congenital adrenal hyperplasia are reported. The determination of 17-hydroxyprogesterone values in amniotic fluid taken transabdominally at 11 weeks of gestation enabled prenatal diagnosis of congenital adrenal hyperplasia due to 21-hydroxylase (21-OH) deficiency. There is a clear-cut difference between normal and pathological values at that time of pregnancy. This method of diagnosis can be combined with genotyping of the fetus by HLA-DNA probes on chorionic villus sampling or can be used alone. Prenatal diagnosis with a 21-OH probe is possible when a preliminary study has demonstrated that the index case is homozygous for the deletion.     

Prenatal diagnosis with biotinylated chromosome specific probes

We have used a Y-chromosome specific DNA probe in a controlled study to determine the presence of Y-chromosome material and to detect numerical abnormalities in uncultured amniotic fluid cells by fluorescent hybridization. Using this non-radioactive method, we correctly predicted fetal sex within 48 h in all but 3 of 54 cases and identified an XYY syndrome. The technique was previously tested with no false-positive or false-negative results on cultured interphase or metaphase nuclei of fetal fibroblasts and adult T-lymphocytes. Fluorescent in situ hybridization was applied to long-term fixed cytogenetic preparations up to 44 months old and was shown to be reliable.     

Advanced post-processing and correlation analyses in high-velocity air–water flows

The interest in air–water flows has not diminished in recent years, but it is accompanied by frequent citations of early, sometimes outdated articles. A basic issue is the inadequate, incomplete interpretation of air–water flow instrumentation by hydraulic engineers and researchers. This article comments on high-velocity air–water flow measurements by means of intrusive phase detection probes. This article focus on the bubbly flow structure of high-velocity air–water flow based upon measurements by means of intrusive phase detection probes. It is shown that some advanced post-processing techniques may yield expanded information on the air–water turbulent flow properties and bubbly flow structures. The outcomes demonstrate simple techniques in high-velocity air–water flow analysis.     

Prenatal diagnosis of X-linked retinitis pigmentosa (RP) in five pregnancies at risk

Five pregnancies at risk for X-linked retinitis pigmentosa (RP) have been monitored by first-trimester prenatal diagnosis using DNA markers flanking the RP2 and RP3 loci. Three affected and two unaffected fetuses, including a female carrying a wild-type genotype, were predicted on the basis of marker segregation and estimation of the recombination fraction.     

北京市生物源一次气溶胶数浓度变化特征及影响因素

生物源一次气溶胶（PBAP）,是大气颗粒物的重要组成部分,不论微生物死活,对空气质量和人类健康均会产生影响,同时对大气化学以及气候变化都有重要影响.基于流式细胞仪分析技术,结合碘化丙啶（PI）和SYBR （SYBR Green I）双荧光探针,对北京城区大气环境中死的和活的PBAP进行了识别和定量分析,并探究气象因子和空气污染因子对其影响.结果发现,北京城区死的和活的PBAP数浓度中值夏季（1.03×10⁶个·m^-3和7.43×10⁵个·m^-3）高于冬季（7.34×10⁵个·m^-3和6.18×10⁵个·m^-3）,且两者呈现明显的同步变化趋势.统计学结果分析发现,PBAP数浓度与气象条件和空气质量等环境影响因子相关性并不显著,与温度和湿度呈现弱正相关关系,与O₃、最大风速和日照时数呈现弱负相关关系.PBAP数浓度与细颗粒物PM_2.5浓度相关性较弱,与粗颗粒物（PM_2.5-10）浓度呈现明显的正相关关系.静稳天气和沙尘长距离传输都可以提升北京城区PBAP的数浓度水平.