畜禽养殖废水生物处理与农田利用过程抗生素抗性基因的转归特征研究进展

兽用抗生素的广泛使用造成了畜禽养殖场及其周边环境中抗生素抗性基因丰度的提高,而畜禽养殖废水所携带的抗性基因在生物处理及其农田利用过程中的转归规律尚不明确,存在抗性基因从畜禽养殖场向周边环境的传播风险.本文通过文献调研,综述了畜禽养殖废水中抗性基因的赋存特征、抗性基因在畜禽养殖废水生物处理和农田利用过程中转归的研究进展,并提出了今后的研究方向,以期为揭示畜禽养殖废水在生物处理和农田利用过程中抗性基因的消减规律、降低抗性基因传播风险提供借鉴.     

Diversity of chlorobiphenyl-metabolizing bacteria and their biphenyl dioxygenases in contaminated sediment

Bacteria and bacterial communities in sites contaminated with polychlorinated biphenyls have been extensively studied in the past decades. However, there are still major gaps in the knowledge of environmental processes, especially in the behavior of previously described bacteria in vitro, their real degradation abilities and the enzymes that are involved in the degradation processes.     

双酚A(BPA)暴露对WHHL家兔糖类和脂类代谢的影响

为利用和人类更为接近的动物模型来研究在高脂血症条件下,BPA暴露是否能促进脂类和糖类代谢异常,并探索潜在的毒性效应机制,选取渡边可遗传高脂血症家兔(WHHL)模型,通过灌胃的方式将其暴露于400μg·kg-1体重的BPA溶液长达12周。在持续暴露第8周,检测了在空腹状态下,家兔血浆中葡萄糖、胰岛素和脂肪含量的变化,并根据所得结果进行了静脉注射胰岛素耐受试验(IVTT)。在暴露第12周,同样对空腹状态下,家兔血浆中的葡萄糖,胰岛素和脂肪含量进行了检测,并测量了血压和心率。然后,将所有的家兔进行解剖,通过苏木精-伊红(HE)及糖原(PAS)染色分别对心脏和肝脏部位的脂肪及糖原蓄积情况进行了病理学切片分析。同时,检测了肝脏中与脂类和糖类代谢相关基因在m RNA水平上的表达变化。结果显示,BPA暴露8周后促使WHHL家兔发生了胰岛素抵抗现象,导致第12周血糖及胰岛素含量升高,同时也促进了高密度脂蛋白胆固醇(HDL-C)、低密度脂蛋白胆固醇(LDL-C)及游离脂肪酸(NEFA)含量的上升。BPA暴露第12周,暴露组WHHL家兔的冠状动脉粥样硬化损伤程度未发生明显增加,但心肌细胞发生了肿胀,胞质中出现了脂肪的蓄积,同时伴随着心律失常。肝脏重量发生增加,肝细胞中同时出现了脂肪和糖原的蓄积现象,相关基因的表达发生了显著上调。研究结果表明,BPA持续暴露可促进WHHL家兔发生脂类和糖类代谢异常,其毒性效应机制可能和胰岛素抵抗及相关基因的异常表达有关。     

畜禽养殖过程抗生素使用与耐药病原菌及其抗性基因赋存的研究进展

兽用抗生素在提高畜禽生产性能、防治疾病方面发挥着重要作用,目前全球超过一半以上抗生素用于畜禽养殖,畜禽养殖源耐药病原菌、抗性基因及其传播风险愈益得到人们的重视。我国是畜禽养殖和抗生素使用大国,但兽用抗生素使用、病原菌耐药水平及其抗性基因类型等数据却较为缺乏,不利于今后畜禽养殖源耐药病原菌及其传播风险的控制。因此,本文通过文献调研,对我国和主要发达国家的兽用抗生素使用情况、畜禽养殖源耐药病原菌及其携带的抗性基因、基因移动元件以及向环境传播的途径进行分析、总结,以期为规范合理用药、降低耐药病原菌及其抗性基因传播风险,建立从畜禽养殖场至公共环境全过程的抗性污染控制链条提供借鉴。     

Characterization and catabolic genes detection of three oil-degrading Rhodococcus spp.北大核心CSCD

Oil pollution is one of the major factors causing environmental deterioration. Bioremediation of oil contaminated environments by microorganisms attracts much research attention. This study aimed to screen efficient oil-degrading bacteria from oil contaminated soil and analyze their characteristics and catabolic genes. Oil-degrading bacteria were screened from oil contaminated soil in minimal medium containing crude oil and identified by morphological, physiological and biochemical characteristics and 16S rDNA sequence analysis. Their growth and degradation characteristics were studied with ultraviolet spectroscopy and GC-MS analysis. The surfactant production was studied by adopting culture method. The major oil-degrading related genes were detected by t he PCR a mplification. As a result, t hree oil-degrading bacteria strains named KB1, 2182 and JC3-47 were isolated from the oil contaminated soil samples. The strains could use crude oil as the sole carbon source to degrade oil with a degrading rate of 41.02%, 32.26% and 55.90%, respectively, when cultured in minimal medium containing crude oil for 3 days. The bacteria were identified to belong to genus Rhodococcus. With 100% similarity of 16S rDNA sequences of the three strains with known ones of Rhodococcus, KB1 was preliminarily identified as Rhodococcus erythropolis, 2182 as Rhodococcus equi, and JC3-47 as Rhodococcus qingshengii. They grew well at 10-50 °C, with the initial pH of 3-9 and the NaCl concentration of 0-5%. The optimal temperature for bacterial growth was 35 °C, 35 °C and 30 °C respectively. KB1 and 2182 could grow at pH 2 and 9.0% of NaCl. The bacteria grew well in broth containing different organic substrates as sole carbon source, such as n-dodecane, n-octadecane, benzene, methylbenzene, xylene and naphthaline. KB1 and JC3-47 could grow well in broth containing pyrene. GC-MS analysis revealed that the bacteria could effectively degrade medium- and long-chain alkane components in crude oil. The bacteria produced biosurfactants and decreased the surface tension of the culture broth. They also showed adhesion activities to n-hexadecane. The oil-degrading related genes such as alkane monooxygenase, aromatic-ring-hydroxylating dioxygenase and catechol dioxygenase genes were detected in all the three strains. Besides, biphenyl dioxygenase genes were detected in KB1 and 2182. The isolated Rhodococcus spp. strains could effectively degrade petroleum hydrocarbons with high adaptabilities to extreme environments such as high salt and low temperature. They are supposed to be applied broadly in the bioremediation of oil contaminated soil in such environments.     

多溴联苯醚微生物降解过程与机理的研究进展

多溴联苯醚(PBDEs)属溴代阻燃剂,曾因其优良的阻燃性能而广泛应用于电子电器、石油化工和建材纺织等工业产品中.然而,随着大量生产和使用,PBDEs已成为大气、水体、土壤和生物体等多环境介质中普遍检出且极具生态风险的有机污染物.因此,开展微生物降解研究对于典型环境中PBDEs污染风险消除和污染修复,具有重要的科学意义.本文从PBDEs环境归趋行为及其暴露风险出发,综述了PBDEs微生物厌氧降解和好氧降解的最新研究动态,比较分析了两种降解过程的降解特性与影响因素,并针对微生物,尤其是好氧微生物降解机理,阐述了bph A或etb A功能基因及其编码酶对PBDEs好氧降解过程的调控作用,同时就PBDEs微生物高效降解菌种选育、降解机理等方面的研究趋势进行了展望.     

The exposure risks associated with pathogens and antibiotic resistance genes in bioaerosol from municipal landfill and surrounding area

Pathogenic microbes with antibiotic resistance can thrive on municipal solid waste as nutrients and be aerosolized and transported to vicinities during waste disposal processes. However, the characterization of pathogenic bioaerosols and assessment of their exposure risks are lacking. Herein, particle size, concentration, activity, antibiotic resistance, and pathogenicity of airborne microorganisms were assessed in different sectors of a typical landfill. Results showed that active sector in downwind direction has the highest bioaerosol level (1234 CFU/m³), while residential area has the highest activity (14.82 mg/L). Botanical deodorizer from mist cannon can effectively remove bioaerosol. Most bioaerosols can be inhaled into respiratory system till bronchi with sizes ranging from 2.1−3.3 and 3.3−4.7 µm. Pathogenic bacteria (Bacilli, Bacillus, and Burkholderia-Paraburkholderia) and allergenic fungi (Aspergillus, Cladosporium, and Curvularia) prevailed in landfill. Although high abundance of microbial volatile organic compounds (mVOCs) producing bioaerosols were detected, these mVOCs contributed little to odor issues in landfill. Notably, surrounding areas have higher levels of antibiotic-resistance genes (ARGs) than inner landfill with tetC, acrB, acrF, mdtF, and bacA as dominant ones. Most ARGs were significantly correlated with bacterial community, while environmental parameters mainly influenced fungal prevalence. These findings can assist in reducing and preventing respiratory allergy or infection risks in occupational environments relating to waste management.     

微塑料及金属在黄浦江地表水环境的赋存特征及与金属抗性基因的相关性分析

城市河流是微塑料(MPs)及重金属污染的“热点”区域,在污染迁移中起到重要作用.然而同样作为抗性基因赋存及释放的重要媒介,鲜有研究考察了流域MPs、金属与金属抗性基因(MRGs)的关联.为此,调研了10个黄浦江站点水样的金属及MPs的污染特征,并基于宏基因组学对水样及提取的MPs上的MRGs及可移动遗传元件(MGEs)进行分析.结果显示,表层水中ρ[锑(Sb)]平均值最高,为(3.16±0.419)μg·L^-1. MPs的丰度平均值为(1.78±0.84)n·L^-1,位于工业区和人口密集区的MPs丰度显著高于农业区和低人口密度的区域.纤维状、“小粒径”(<0.5 mm)的聚对苯二甲酸乙二醇酯(PET)是最主要的MPs类型.所有样本中共检出18类MRGs,其中水样中MRGs的相对丰度为1.68±0.21.最主要的MRGs亚型是merR和ruvB,分别为汞和多重金属抗性基因的亚型.相关性分析表明,水中的铬和镍与MRG-Cr、MRG-Ni和多重金属抗性基因之间存在显著正相关.MPs上MRGs的相对丰度为1.63±0.53,最主要的MRGs亚型...     

荒漠绿洲土壤抗生素抗性基因分布特征及驱动机制

荒漠绿洲农田生态系统是干旱区环境下人类活动显著的复合生态系统.土壤微生物抗生素抗性与人类健康和生态平衡关系密切.研究荒漠绿洲环境不同土地利用类型模式下土壤抗生素抗性基因的多样性、分布特征和影响因素,对于评估干旱区土壤环境健康风险,促进绿洲农业生态的发展具有重要意义.采用高通量测序和高通量定量PCR技术对荒漠绿洲土壤微生物的群落结构和抗生素抗性基因多样性开展了研究,旨在探究干旱区土壤抗性基因的分布特征及其驱动机制.结果表明,从沙漠边缘到绿洲,荒漠沙生植物土壤、棉花地土壤、玉米地土壤、芦苇地土壤和湖泊沉积物中抗生素抗性的种类和丰度显著增加,与土地利用变化关系密切,农田土壤是抗性基因的重要存储库;荒漠绿洲土壤微生物群落与抗生素抗性基因显著相关,硫杆菌属(Thiobacillus)、沙漠细菌属(Pontibacter)、诺卡氏菌属(Nocardioides)、耐盐微杆菌属(Salinimicrobium)、土壤红杆菌属(Solirubrobacter)和链霉菌属(Streptomyces)等是各类抗性基因重要的潜在携带者;干旱区土壤中重(类)金属元素和可移动基因元件,与微生物群落共同塑造了抗生...     

Function of arsATorf7orf8 of Bacillus sp. CDB3 in arsenic resistance

Bacillus sp. CDB3 isolated from an arsenic contaminated cattledip site possesses an uncommon arsenic resistance (ars) operon bearing eight genes in the order of arsRYCDATorf7orf8. We investigated the functions of arsA, arsT, orf7 and orf8 in arsenic resistance using a plasmid-based gene knockout approach in the ars genedeficient Escherichia coli strain AW3110. The CDB3 arsA genewas shown to play a significant role in resistance, suggesting that the encoded ArsA may couplewith the arsenite transporter, forming an ArsAY complex that can enhance arsenite extrusion efficiency. Thedisruption of either arsT or orf7was not observed to affect arsenic resistance in the heterologous E. coli host, but their involvement in arsenic resistance can not be excluded. The orf8 gene is predicted to encode a putativedual-specificity protein phosphatasewhich also shares certain homology to arsenate reductases. The function loss of orf8 resulted in a remarkabledecrease in resistance to arsenate, though not arsenite. To examine if this effectwasdue to the reduction of arsenate by orf8, the arsC genewithin the 8-gene operonwasdisrupted. The resulting abolishment of arsenate resistance suggests that the involvement of orf8 in arsenic resistance is not via reductase activity.