Maize: The Native North American’s Legacy of Cultural Diversity and Biodiversity

Recent research has focused on establishing the values of preserving biodiversity both in agriculture and in less managed ecosystems, and in showing the importance of the role of cultural diversity in preserving biodiversity in food production systems. A study of the philosophy embedded in cultural systems can reveal the importance of the technological information for preserving genetic biodiversity contained in such systems and can be used to support arguments for the protection/preservation of cultural diversity. For example, corn or maize can serve as a paradigm of Native American thinking and can provide one of the few areas from which common philosophical conceptions can emerge. An examination of the cultivation of corn or maize as an agricultural activity and as a cultural activity in Native American literature reveals a philosophy that recognizes the importance of biodiversity and provides techniques for its preservation. Corn, and the food and the materials derived from it, is something thought out, not by specialists, but by the entire tribe and its ancestors, even if this thinking is done within what we might consider a framework of highly mythical notions. Importantly, this framework yields an understanding of both the genetics and nutrition of corn. A survey of these mythical notions (myths and stories) and agricultural practices makes this thought explicit and exemplifies the value of cultural diversity and biodiversity.     

Using environmental heterogeneity to plan for sea‐level rise

Environmental heterogeneity is increasingly being used to select conservation areas that will provide for future biodiversity under a variety of climate scenarios. This approach, termed conserving nature's stage (CNS), assumes environmental features respond to climate change more slowly than biological communities, but will CNS be effective if the stage were to change as rapidly as the climate? We tested the effectiveness of using CNS to select sites in salt marshes for conservation in coastal Georgia (U.S.A.), where environmental features will change rapidly as sea level rises. We calculated species diversity based on distributions of 7 bird species with a variety of niches in Georgia salt marshes. Environmental heterogeneity was assessed across six landscape gradients (e.g., elevation, salinity, and patch area). We used 2 approaches to select sites with high environmental heterogeneity: site complementarity (environmental diversity [ED]) and local environmental heterogeneity (environmental richness [ER]). Sites selected based on ER predicted present‐day species diversity better than randomly selected sites (up to an 8.1% improvement), were resilient to areal loss from SLR (1.0% average areal loss by 2050 compared with 0.9% loss of randomly selected sites), and provided habitat to a threatened species (0.63 average occupancy compared with 0.6 average occupancy of randomly selected sites). Sites selected based on ED predicted species diversity no better or worse than random and were not resilient to SLR (2.9% average areal loss by 2050). Despite the discrepancy between the 2 approaches, CNS is a viable strategy for conservation site selection in salt marshes because the ER approach was successful. It has potential for application in other coastal areas where SLR will affect environmental features, but its performance may depend on the magnitude of geological changes caused by SLR. Our results indicate that conservation planners that had heretofore excluded low‐lying coasts from CNS planning could include coastal ecosystems in regional conservation strategies.     

Potential Negative Ecological Effects of Corridors

Despite many studies showing that landscape corridors increase dispersal and species richness for disparate taxa, concerns persist that corridors can have unintended negative effects. In particular, some of the same mechanisms that underlie positive effects of corridors on species of conservation interest may also increase the spread and impact of antagonistic species (e.g., predators and pathogens), foster negative effects of edges, increase invasion by exotic species, increase the spread of unwanted disturbances such as fire, or increase population synchrony and thus reduce persistence. We conducted a literature review and meta‐analysis to evaluate the prevalence of each of these negative effects. We found no evidence that corridors increase unwanted disturbance or non‐native species invasion; however, these have not been well‐studied concerns (1 and 6 studies, respectively). Other effects of corridors were more often studied and yielded inconsistent results; mean effect sizes were indistinguishable from zero. The effect of edges on abundances of target species was as likely to be positive as negative. Corridors were as likely to have no effect on antagonists or population synchrony as they were to increase those negative effects. We found 3 deficiencies in the literature. First, despite studies on how corridors affect predators, there are few studies of related consequences for prey population size and persistence. Second, properly designed studies of negative corridor effects are needed in natural corridors at scales larger than those achievable in experimental systems. Third, studies are needed to test more targeted hypotheses about when corridor‐mediated effects on invasive species or disturbance may be negative for species of management concern. Overall, we found no overarching support for concerns that construction and maintenance of habitat corridors may result in unintended negative consequences. Negative edge effects may be mitigated by widening corridors or softening edges between corridors and the matrix. Other negative effects are relatively small and manageable compared with the large positive effects of facilitating dispersal and increasing diversity of native species. Efectos Negativos Potenciales de los Corredores     

Implications of Macroalgal Isolation by Distance for Networks of Marine Protected Areas

The global extent of macroalgal forests is declining, greatly affecting marine biodiversity at broad scales through the effects macroalgae have on ecosystem processes, habitat provision, and food web support. Networks of marine protected areas comprise one potential tool that may safeguard gene flow among macroalgal populations in the face of increasing population fragmentation caused by pollution, habitat modification, climate change, algal harvesting, trophic cascades, and other anthropogenic stressors. Optimal design of protected area networks requires knowledge of effective dispersal distances for a range of macroalgae. We conducted a global meta‐analysis based on data in the published literature to determine the generality of relation between genetic differentiation and geographic distance among macroalgal populations. We also examined whether spatial genetic variation differed significantly with respect to higher taxon, life history, and habitat characteristics. We found clear evidence of population isolation by distance across a multitude of macroalgal species. Genetic and geographic distance were positively correlated across 49 studies; a modal distance of 50–100 km maintained F_ST < 0.2. This relation was consistent for all algal divisions, life cycles, habitats, and molecular marker classes investigated. Incorporating knowledge of the spatial scales of gene flow into the design of marine protected area networks will help moderate anthropogenic increases in population isolation and inbreeding and contribute to the resilience of macroalgal forests. Implicaciones del Aislamiento por Distancia de Macroalgas para Redes de Áreas Marinas Protegidas     

昌黎生态监控区夏季浮游植物群落年际变化特征分析

为研究昌黎生态监控区夏季浮游植物群落结构特征及其与环境因子关系,采用2005~2013年夏季(8月)昌黎生态监控区海域浮游植物及环境因子的监测资料,基于Arc GIS 10.0和Canoco软件平台,运用典范对应分析方法,对浮游植物群落结构进行分析.结果表明,近9 a共鉴定出浮游植物3门23科39属105种,其中,硅藻门16科32属90种,占浮游植物总数的85.7%;甲藻门共6科6属14种,占总种类数的13.3%;金藻门1种.各年的优势种存在很大差异,按照优势度Y值的大小包括辐射圆筛藻(Coscinodiscus radiatus)、柔弱角毛藻(Coscinodiscus debilis)、笔尖根管藻(Rhizosolenia styliformis)、柏氏角管藻(Cerataulina bergoni)、威氏圆筛藻(Coscinodiscus wailesii)、海链藻(Thalassiosira sp.)、三角角藻(Ceratium tripos)、洛氏角毛藻(Coscinodiscus wailesii)、中肋骨条藻(Ceratium tripos)等.夏季细胞丰度年际变化较大,呈现逐渐降低的趋势.浮游植物的多样性指数H'值介于0.015~3.889,均匀度指数J值介于0.009~1,年际变化幅度较小;各站位间物种分布不均匀,优势种较少且优势度较大.对浮游植物群落与环境因子进行典范对应分析(CCA),结果表明影响夏季浮游植物群落结构变化的环境因子包括水温、营养盐(磷酸盐、硝酸氮、氨氮)、盐度等,且是各个环境因子相互作用的结果.     

宁波三江口水域原核生物群落结构分析

首次应用16S rRNA基因-Illumina Miseq高通量测序技术对甬江流域宁波三江口区域的表层水体原核生物群落进行了分析,共获得215 504条高质量序列.多样性指数分析表明,该流域的水体原核生物群落具有较高的遗传多样性和丰富度.菌群分类分析发现,β-变形菌纲(β-Proteobacterium)、放线菌门(Actinobacteria)和拟杆菌门(Bacteroidetes)是主要的优势菌群,其相对丰度占总群落的78.88%.对比不同站位的原核生物群落,发现水文环境可能是影响三江口水域原核生物群落组成和结构的重要因素之一.与以往报道对比分析表明,甬江流域分布有多种污水和粪便污染指示菌,其中余姚江污染指示菌的丰度最高,说明其受污染的风险可能较高.病原菌BLASTN分析表明,在种和亚种水平上,分别检出76和18种潜在病原菌,占序列总量的2.19%和0.40%.本研究为系统认识甬江流域原核生物群落结构及生态功能提供了重要基础数据.     

Performance and microbial community of a membrane bioreactor system——Treating wastewater from ethanol fermentation of food waste

In this study, a lab-scale biological anaerobic/anaerobic/anoxic/membrane bioreactor(A_-~3MBR) was designed to treat wastewater from the ethanol fermentation of food waste,a promising way for the disposal of food waste and reclamation of resources. The 454 pyrosequencing technique was used to investigate the composition of the microbial community in the treatment system. The system yielded a stable effluent concentration of chemical oxygen demand(202 ± 23 mg/L), total nitrogen(62.1 ± 7.1 mg/L), ammonia(0.3 ±0.13 mg/L) and total phosphorus(8.3 ± 0.9 mg/L), and the reactors played different roles in specific pollutant removal. The exploration of the microbial community in the system revealed that:(1) the microbial diversity of anaerobic reactors A_1 and A_2, in which organic pollutants were massively degraded, was much higher than that in anoxic A_3 and aerobic MBR;(2) although the community composition in each reactor was quite different, bacteria assigned to the classes Clostridia, Bacteroidia, and Synergistia were important and common microorganisms for organic pollutant degradation in the anaerobic units, and bacteria from Alphaproteobacteria and Betaproteobacteria were the dominant microbial population in A_3 and MBR;(3) the taxon identification indicated that Arcobacter in the anaerobic reactors and Thauera in the anoxic reactor were two representative genera in the biological process. Our results proved that the biological A_-~3MBR process is an alternative technique for treating wastewater from food waste.     

原始红松林退化演替后土壤微生物功能多样性的变化

为了全面了解原始红松林退化演替为次生林后土壤生境及土壤微生物功能多样性的变化规律,以小兴安岭典型的原始阔叶红松林、退化演替后先锋阶段的白桦林及亚顶级阶段的硬阔叶林为研究对象,采用Biolog-ECO微平板检测法,分析三者0~ < 10 cm和10~20 cm表层土的土壤微生物功能多样性变化规律.结果表明:各林型土壤微生物的AWCD值（平均颜色变化率）随培养时间的延长而增加,培养初期表现为原始阔叶红松林>硬阔叶林>白桦林;培养末期表现为原始阔叶红松林>白桦林>硬阔叶林,三者的AWCD值在0~ < 10 cm土层分别为1.06、0.86、0.81,10~20 cm土层分别为0.68、0.47、0.45,原始林显著高于次生林（P < 0.05）,说明原始林土壤微生物对单一碳源的代谢活性显著高于次生林;同一林型下土壤微生物的AWCD值均表现为0~ < 10 cm土层显著高于10~20 cm土层（P < 0.05）. Shannon-Wiener多样性指数、Simpson指数、McIntosh指数和Richness丰富度指数也均表现为原始林显著高于次生林（P < 0.05）.原始林土壤微生物对各类碳源的综合利用强度均大于次生林,不同林型下土壤微生物群落的优势碳源类型存在一定的差异,碳水类、氨基酸类、羧酸类和多聚物类碳源是原始林退化演替后土壤微生物群落在碳源利用上发生变化的敏感碳源.      

石油污染土壤生物修复过程中氮循环功能基因的动态检测

氮循环相关功能微生物在土壤发挥其生态功能中起着重要的作用.为定量分析其中的固氮细菌、反硝化细菌和硝化细菌在石油污染土壤生物修复过程中的演变情况,采用了实时定量PCR技术对其相关功能基因nifH、narG和amoA的拷贝数进行检测.结果表明,污染土壤中nifH、narG和amoA基因拷贝数及其占总16S rRNA基因拷贝数的比例远低于正常土壤,修复后土壤中的同类分析结果与正常土壤接近.表明石油污染物破坏了氮循环相关菌落结构,而生物修复则使其得以恢复.进一步分析了不同修复方式下氮循环功能基因的恢复情况以及土壤中石油烃降解率.也表明同时添加秸秆和菌剂具有最好的修复效果,处理40 d后其nifH、narG和amoA基因拷贝数（以干土计）分别恢复到2.68×106、1.71×106和8.54×104g-1,石油烃降解率达到48%.投加真菌-细菌复合菌剂的效果优于只投加细菌菌剂的效果.本研究结果表明氮循环功能基因的动态监测可以从基因和物种水平上反映土壤修复的效果,为土壤修复的监控和效果评估提供参考.     

蔗渣垫料在零排放发酵床养猪中的应用研究

目前微生物发酵床养猪垫料是选用木屑、谷壳作为原料,来实现零排放养猪。文章选用农业固体废弃物——蔗渣为垫料应用于零排放漏缝发酵床养猪,跟踪了3个月垫料在实际使用中的温度、有机质、氮、磷、钾、微生物指标,对蔗渣的使用效果进行了评价,并建立PCR反应体系来扩增DNA,利用PCR-DGGE技术对垫料中的微生物群落多样性进行研究。结果表明:蔗渣作为垫料,能使垫床温度控制在40⁶5℃之间,保证了良好的发酵效果、且有效活菌数达到0.22×109cfu/g,可以对猪粪便等有机质进行较彻底的消解,因此蔗渣可以作为一种垫料应用于零排放漏缝发酵床;垫料中总养分达到1.371 7%,使用后的垫料可以作为一种原料生产生物有机肥。