Monitoring impact of mefenacet treatment on soil microbial communities by PCR-DGGE fingerprinting and conventional testing procedures

The effect of acetanilide herbicide mefenacet on soil microbial communities was studied using paddy soil samples with different short-term treatments. The culturable bacteria （plate counts）, dehydrogenase activity and changes in community structure （denaturing gradient gel electrophoresis （DGGE） analysis） were used for biological community assessments. Mefenacet was a significant stimulus to cultural aerobic bacteria and dehydrogenase activity while Sphingobacterium multivorum Y1, a bacterium efficiently degrading the mefenacet, only induced the increasing colony-forming unit （CFU） of bacteria but little effect on dehydrogenase activity during the whole experiment. The degree of similarity between the 16S rDNA profiles of the communities was quantified by numerically analyzing the DGGE band patterns. Similarity dendrograms showed that the microbial community structures of the mefenacet-treated and non-treated soils were not significantly different. But supplement of S. multivorum Y1 could increase the diversity of the microbial community in the mefenacet-polluted paddy soil. This work is a new attempt to apply the S. multivorum Y1 for remediation of the mefenacet-polluted environments.     

Influence of tetracycline exposure on the growth of wheat seedlings and the rhizosphere microbial community structure in hydroponic culture

In this study, the effects of tetracycline exposure on wheat growth and the microbial community structure in the rhizosphere were investigated under hydroponic culture conditions. Exposure to various concentrations of tetracycline resulted in significant suppression of the growth of wheat roots and shoots, with minimum doses of 0.8 mg L^?1 and 4 mg L^?1 resulting in inhibition rates of 32% and 15.4%, respectively. Complete inhibition of the growth of these two parts of wheat plants was observed in response to treatment with tetracycline at 20 mg L^?1 and 100 mg L^?1, respectively. However, the germination of wheat seeds was not sensitive to exposure to tetracycline. The effects of tetracycline exposure on the microbial community in the wheat rhizosphere were evaluated through traditional cultivation and molecular biological analyses. The cultivation results indicated that bacteria were the dominant population, being present in concentrations of 1× 10⁸–2.45× 10⁹CFUs mL^?1, although 39% to 87% inhibition occurred in response to tetracycline. The concentration of fungi increased in all tetracycline treated samples to 2.5 to 15.8 times that of the control. The highest concentration of fungi (4.27× 10⁸ CFU mL^?1) was observed in response to 60 mg L^?1 tetracycline after 15 days of cultivation. In this stage, a large amount of fungal colonies was observed on the surface of the culture solution, the wheat roots became rotted and the plants became atrophic or even died. Molecular biological analysis indicated that the bacterial community structure was significantly different in samples that were exposed to high levels of tetracycline (over 20 mg L^?1) than in samples that were exposed to lower concentrations. As the concentration of tetracycline increased, the diversity of the bacteria decreased. Additionally, several dominant sensitive species such as Sphingobacterium multivorum were suppressed by tetracycline, while some resistant species such as Acinetobacter sp. appeared or were conserved. The bacteria population tended to stabilize when the drug concentration exceeded 40 mg L^?1.     

Metagenomic assessment of the microbial diversity in ground pork products from markets in the North Central Region of South Korea

The purpose of this study was to characterize the microbial community in ground pork using molecular approaches. Forty six ground pork products were purchased from local stores in the north central area of South Korea. Aerobic plate counts varied 4.23 ± 5.14 × 10⁵ CFU/g with the range between 5.00 × 10³ and 1.85 × 10⁶ CFU/g for ground pork samples. Four ground meat samples were further processed for metagenomic analysis. Pseudomonas species was the most relative abundant with a wide range occurring (1.72 to 77.7%) as part of the microbial genera in ground pork. Bacteria such as Carnobacterium, Yersinia, Photobacterium were also identified in ground pork. Despite the prominence of certain genera across all samples there was still extensive microbial diversity among ground pork products that originated from different slaughter houses and were processed in different markets. Such diversity indicates that designing interventions to extend shelf life may be hampered by the extensive variability in the microbial consortia associated with pork products. However, this diversity may be useful for developing microbial traceability signatures unique to a slaughter house or a particular market.     

全二维气相色谱/飞行时间质谱联用监测环境空气中VOCs

采用全采样系统-全二维气相色谱/飞行时间质谱联用技术监测环境空气中的VOCs,优化了调制周期、升温程序、进样体积等分析条件.39种目标化合物在0 μg/m3～10.0 μg/m3范围内线性良好,检出限范围为0.03 μg/m3～0.09 μg/m3,标准气体平行测定的RSD为1.1％ ～5.3％.应用于化工园区环境空气样品测定,与热脱附-气相色谱/质谱法相比,目标物的分离效果更佳.     

水样中常见金属离子的快速测定

研究了用高效毛细管电泳对自来水水样中常见金属离子的快速测定方法。结果表明,K+、Na+、Li+、Ca2+、Mg2+、Ba2+、Sr2+7种离子在8 min内可全部分离,回收率为98.0%~103.3%。峰面积和迁移时间的相对标准偏差分别在3.2%和1.1%以下,重现性较好,具有较高的检测灵敏度。     

根瘤菌新类群的全细胞蛋白电泳及16S rDNA全序列分析

应用ＳＤＳ全细胞蛋白电泳技术对根瘤菌３个新类群进行聚类分析,并对３个新类群中心菌株的１６Ｓ ｒＤＮＡ全序列（Ｍｒ≈１．５ｋｂ）进行了测定。将所测序列与ＥＭＢＬ／ＢａｎｋＩＴ／ＤＤＢＪ资料库中根瘤菌及相关菌已知种的１６Ｓ ｒＤＮＡ全序列进行聚类比较,得到系统发育树状图,树状图中,菌株ＳＨ２２６２３和ＳＨ１９３１２与山羊豆根瘤菌、葡萄土壤杆菌、根癌土壤杆菌和悬钩子土壤杆菌在同一个分支上,彼此亲缘关系较     

干旱地区几种豆科植物根瘤菌的数值分类和SDS-PAGE全细胞蛋白电泳分析

从新疆、内蒙干旱地区苜蓿属、草木樨属、锦鸡儿属植物的根瘤中分离出５４株根瘤菌,对其中４８株根瘤菌和２２株参比菌一起进行了数值分类研究,在８５％的相似性水平上,未知菌分为３个不同于已知种的新群．另加入６株分离自锦鸡儿属植物的根瘤菌,共７６株菌进行了全细胞蛋白ＳＤＳＰＡＧＥ分析,在８０％的相似性水平上,已知菌相应成群,未知菌除ＸＪ９６３４２在６８％的相似性水平上和群５、６、７、８、Ｒ．ｇａｌｅｇａ聚群外,其余未知菌则分布在４、５、６、７、８、９、１０七个群中．群４中所有菌株属于数值分类的群１;群６中有３株菌属于数值分类的群３;群９中有８株菌为数值分类群２的菌株．反映了两种方法在分类上得到的结果比较近似．     

Two-dimensional numerical algorithm for water qualitymodeling in the topographically complicated river

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The enantiomeric composition of monoterpene hydrocarbons in the defensive secretions ofNasutitermes termites (Isoptera): Inter- and intraspecific variations

Summary Frontal gland secretions of termite soldiers of the speciesNasutitermes costalis, N. ephratae, N. nigriceps, N. rippertii, andN. hubbardii were analyzed. The chiral compositions of the monoterpene hydrocarbons were investigated by means of two-dimensional gas chromatography. Two of them, 3-carene and-pinene were present in the form of (–)-enantiomers of high purity in the majority of the samples. The other monoterpenes,-pinene, camphene, sabinene, limonene, and-phellandrene, exhibited a great variation in the enantiopurity between different species.-Pinene and limonene varied significantly even between different colonies within the species.N. costalis was the only species with an invariable composition of the secretion, independent of the locality or origin.     

铜暴露下赤子爱胜蚓（Eisenia foetida）活体基因的损伤研究

通过碱性单细胞凝胶电泳法研究了Cu2+暴露剂量对赤子爱胜蚓(Eiseniafoetida)活体基因损伤的动态影响.结果显示:不添加Cu2+的对照组和添加Cu2+的处理组蚯蚓体腔细胞尾部DNA含量和尾长均呈非正态分布(p<0.05);在暴露72h时,125mg·L-1Cu2+处理组尾部DNA含量值最大,为41.44%,100mg·L-1Cu2+处理组尾长值最大,为33.79μm;随着Cu2+暴露剂量的增加,尾部DNA含量和尾长损伤频率增加;对照组和处理组的尾部DNA含量和尾长之间均存在显著性差异(p<0.05),Spearman非参数相关分析表明,尾部DNA百分含量和尾长之间呈显著相关(p<0.01,n=21),Cu2+暴露浓度与尾部DNA百分含量、尾长具有良好的剂量-构效关系(p<0.01).在125mg·L-1Cu2+浓度下暴露72h时蚯蚓的基因损伤程度达到最大,损伤程度为3级.可见,蚯蚓DNA生物标志物是重金属污染基因毒理诊断的重要指标,碱性SCGE试验是检测Cu2+暴露对赤子爱胜蚓活体基因损伤的有效手段.