Polymer Mineralization in Soils: Effects of Cold Storage on Microbial Populations and Biodegradation Potential

Soil retrieval, processing and storage procedures can have a profound effect on soil microorganisms. In particular, changes in soil microbial populations may adversely affect the biological activity of a soil and drastically alter the soil's potential to mineralize added substrates. The effects of cold storage on the biodegradation of a series of test polymers was investigated using two soils—a synthetic soil mix (SM-L8) and a field soil (Bridgehampton silt loam) from Rhode Island (RI-1). Biodegradation tests were conducted using freshly prepared/collected soil and again following storage at 4°C for 3 to 8 months. Prior to each biodegradation test, the soils were incubated at 60% water-holding capacity (WHC) and 25°C to rejuvenate the microbial populations; the soils were incubated for periods of 48 h (freshly collected soil) or 25 days (soils stored at 4°C). Soil microbial populations were assessed by enumerating different segments of the population on agar plates containing different selective media. Mineralization of the test polymers (cellulose, poly-3-hydroxybutyrate, and starch acetate, d.s. 1.5) was monitored using standard respirometric techniques. Our results demonstrated that cold storage had a generally negative effect on the soil microbial populations themselves but that its effect on the capacity of the soil microorganisms to degrade the test polymers varied between soils and polymer type. Whereas cold storage resulted in dramatic shifts in the community structure of the soil microbial populations, substantial restoration of these populations was possible by first conditioning the soils at 60% WHC and ambient temperatures for 25 days. Likewise, although the effects of cold storage on polymer mineralization varied with the test polymer and soil, these effects could be largely offset by including an initial 25-day stabilization period in the test.     

A simple approach to modeling microbial biomass in the rhizosphere

Microorganisms make an important contribution to the degradation of contaminants in bioremediation as well as in phytoremediation. An accurate estimation of microbial concentrations in the soil would be valuable in predicting contaminant dissipation during various bioremediation processes. A simple modeling approach to quantify the microbial biomass in the rhizosphere was developed in this study. Experiments were conducted using field column lysimeters planted with Eastern gamagrass. The microbial biomass concentrations from the rhizosphere soil, bulk soil, and unplanted soil were monitored for six months using an incubation–fumigation method. The proposed model was applied to the field microbial biomass data and good correlation between simulated and experimental data was achieved. The results indicate that plants increase microbial concentrations in the soil by providing root exudates as growth substrates for microorganisms. Since plant roots are initially small and do not produce large quantities of exudates when first seeded, the addition of exogenous substrates may be needed to increase initial microbial concentrations at the start of phytoremediation projects.     

微生物絮凝剂处理含油废水

对用一种用发酵法制备的生物絮凝剂的絮凝性能进行了研究。结果表明,试验所得生物絮凝剂具有较好的耐温性和较好的絮凝能力。对试验用乳浊液絮凝除油效率达95%以上,优于商品破乳剂E-3453的絮凝性能。将生物絮凝剂用于含油废水的处理,出水含油量小于5mg/L。     

产气肠杆菌(KLE-1)絮凝特性的研究

从土壤中筛选出一株产生菌KLE-1,经鉴定该菌株为产气肠杆菌(Klebsiella mobilis)．利用乳品废水作为发酵培养基,该菌株产生多糖类微生物絮凝剂;Ca^2 对该絮凝剂的助絮凝效果优于其它金属阳离子;采用红外扫描、zeta电位测定仪对絮凝机理进行研究,表明该絮凝剂主要以架桥作用为主．     

Microbial responses to the use of NaClO in sediment treatment

• Chlorine addition enhanced the release of TOC, TN from the sediment. • Chlorine has a long-term negative effect on microbial richness. • Usually enzymes lose activity, and expression of genes was downregulated. • Carbon degradation and nitrification might be strongly inhibited. Chlorine is often used in algal removal and deodorization of landscape waters, and occasionally used as an emergency treatment of heavily polluted sediments. However, the ecological impact of this practice has not been fully studied and recognized. In this study, NaClO at 0.1 mmol/g based on dry weight sediment was evenly mixed into the polluted sediment, and then the sediment was incubated for 150 days to evaluate its microbial effect. Results showed that NaClO addition enhanced the release of TOC, TN, Cr and Cu from the sediment. The microbial richness in the examined sediment decreased continuously, and the Chao1 index declined from 4241 to 2731, in 150 days. The microbial community composition was also changed. The abundance of Proteobacteria and Bacteroidetes increased to 54.8% and 4.2% within 7 days compared to the control, and linear discriminant analysis (LDA) showed gram-negative bacteria and aerobic bacteria enriched after chlorination. The functional prediction with PICRUSt2 showed the functions of the microbial community underwent major adjustments, and the metabolic-related functions such as carbon metabolism, including pyruvate and methane metabolisms were significantly inhibited; besides, 15 out of 22 analyzed key enzymes involved in C cycling and 6 out of 12 key enzymes or genes involved in N cycling were strongly impacted, and the enzymes and genes involved in carbon degradation and denitrification showed remarkable downregulation. It can be concluded that chlorination posed a seriously adverse effect on microbial community structure and function. This study deepens the understanding of the ecological effects of applying chlorine for environmental remediation.     

Integration of microbial reductive dehalogenation with persulfate activation and oxidation (Bio-RD-PAO) for complete attenuation of organohalides

•Bio-RD-PAO can effectively and extensively remove organohalides. •Bio-RD alone effectively dehalogenate the highly-halogenated organohalides. •PAO alone is efficient in degrading the lowly-halogenated organohalides. •The impacts of PAO on organohalide-respiring microbial communities remain elusive. •Bio-RD-PAO provides a promising solution for remediation of organohalide pollution. Due to the toxicity of bioaccumulative organohalides to human beings and ecosystems, a variety of biotic and abiotic remediation methods have been developed to remove organohalides from contaminated environments. Bioremediation employing organohalide-respiring bacteria (OHRB)-mediated microbial reductive dehalogenation (Bio-RD) represents a cost-effective and environmentally friendly approach to attenuate highly-halogenated organohalides, specifically organohalides in soil, sediment and other anoxic environments. Nonetheless, many factors severely restrict the implications of OHRB-based bioremediation, including incomplete dehalogenation, low abundance of OHRB and consequent low dechlorination activity. Recently, the development of in situ chemical oxidation (ISCO) based on sulfate radicals (SO₄^·−) via the persulfate activation and oxidation (PAO) process has attracted tremendous research interest for the remediation of lowly-halogenated organohalides due to its following advantages, e.g., complete attenuation, high reactivity and no selectivity to organohalides. Therefore, integration of OHRB-mediated Bio-RD and subsequent PAO (Bio-RD-PAO) may provide a promising solution to the remediation of organohalides. In this review, we first provide an overview of current progress in Bio-RD and PAO and compare their limitations and advantages. We then critically discuss the integration of Bio-RD and PAO (Bio-RD-PAO) for complete attenuation of organohalides and its prospects for future remediation applications. Overall, Bio-RD-PAO opens up opportunities for complete attenuation and consequent effective in situ remediation of persistent organohalide pollution.     

Validation of Bacteroidales-based microbial source tracking markers for pig fecal pollution and their application in two rivers of North China

• Pig feces is the predominant excrement produced by animal husbandry in China. • The PF, Pig-1-Bac^TaqMan, and Pig-2-Bac^TaqMan MST assays showed better performance. • The pig-specific MST assays can contribute to managing the pig fecal pollution. In China, pig feces is the predominant source of excrement produced by animal husbandry. Improper use or direct discharge of pig feces can result in contamination of natural water systems. Microbial source tracking (MST) technology can identify the sources of fecal pollution in environmental water, and contribute to the management of pig fecal pollution by local environmental protection agencies. However, the accuracy of such assays can be context-dependent, and they have not been comprehensively evaluated under Chinese conditions. We aimed to compare the performance of five previously reported pig-specific MST assays (PF, Pig-Bac1^SYBR, Pig-Bac2^SYBR, Pig-1-Bac^TaqMan, and Pig-2-Bac^TaqMan, which are based on Bacteroidales 16S rRNA gene markers) and apply them in two rivers of North China. We collected a total of 173 fecal samples from pigs, cows, goats, chickens, humans, and horses across China. The PF assay optimized in this study showed outstanding qualitative performance and achieved 100% specificity and sensitivity. However, the two SYBR green qPCR assays (Pig-Bac1^SYBR and Pig-Bac2^SYBR) cross-reacted with most non-pig fecal samples. In contrast, both the Pig-1-Bac^TaqMan and Pig-2-Bac^TaqMan assays gave 100% specificity and sensitivity. Of these, the Pig-2-Bac^TaqMan assay showed higher reproducibility. Our results regarding the specificity of these pig-specific MST assays differ from those reported in Thailand, Japan, and America. Using the PF and Pig-2-Bac^TaqMan assays, a field test comparing the levels of pig fecal pollution in rivers near a pig farm before and after comprehensive environmental pollution governance indicated that pig fecal pollution was effectively controlled at this location.     

Fecal source tracking by antibiotic resistance analysis on a watershed exhibiting low resistance

The ongoing development of microbial source tracking has made it possible to identify contamination sources with varying accuracy, depending on the method used. The purpose of this study was to test the efficiency of the antibiotic resistance analysis (ARA) method under low resistance by tracking the fecal sources at Turkey Creek, Oklahoma exhibiting this condition. The resistance patterns of 772 water-isolates, tested with nine antibiotics, were analyzed by discriminant analysis (DA) utilizing a five-source library containing 2250 isolates. The library passed various representativeness tests; however, two of the pulled-sample tests suggested insufficient sampling. The resubstitution test of the library individual sources showed significant isolate misclassification with an average rate of correct classification (ARCC) of 58%. These misclassifications were explained by low antibiotic resistance (Wilcoxon test P < 0.0001). Seasonal DA of stream E. coli isolates for the pooled sources human/livestock/deer indicated that in fall, the human source dominated (P < 0.0001) at a rate of 56%, and that human and livestock respective contributions in winter (35 and 39%), spring (43 and 40%), and summer (37 and 35%) were similar. Deer scored lower (17–28%) than human and livestock at every season. The DA was revised using results from a misclassification analysis to provide a perspective of the effect caused by low antibiotic resistance and a more realistic determination of the fecal source rates at Turkey Creek. The revision increased livestock rates by 13–14% (0.04 ≤ P ≤ 0.06), and decreased human and deer by 6–7%. Negative misclassification into livestock was significant (0.04 ≤ P ≤ 0.06). Low antibiotic resistance showed the greatest effect in this category.     

The role of lipids in fermentative propionate production from the co-fermentation of lipid and food waste

● Lipid can promote PA production on a target from food waste. ● PA productivity reached 6.23 g/(L∙d) from co-fermentation of lipid and food waste. ● Lipid promoted the hydrolysis and utilization of protein in food waste. ● Prevotella , Veillonella and norank _f _Propioni bacteriaceae were enriched. ● Main pathway of PA production was the succinate pathway. Food waste (FW) is a promising renewable low-cost biomass substrate for enhancing the economic feasibility of fermentative propionate production. Although lipids, a common component of food waste, can be used as a carbon source to enhance the production of volatile fatty acids (VFAs) during co-fermentation, few studies have evaluated the potential for directional propionate production from the co-fermentation of lipids and FW. In this study, co-fermentation experiments were conducted using different combinations of lipids and FW for VFA production. The contributions of lipids and FW to propionate production, hydrolysis of substrates, and microbial composition during co-fermentation were evaluated. The results revealed that lipids shifted the fermentation type of FW from butyric to propionic acid fermentation. Based on the estimated propionate production kinetic parameters, the maximum propionate productivity increased significantly with an increase in lipid content, reaching 6.23 g propionate/(L∙d) at a lipid content of 50%. Propionate-producing bacteria Prevotella, Veillonella, and norank_f_Propionibacteriaceae were enriched in the presence of lipids, and the succinate pathway was identified as a prominent fermentation route for propionate production. Moreover, the Kyoto Encyclopedia of Genes and Genomes functional annotation revealed that the expression of functional genes associated with amino acid metabolism was enhanced by the presence of lipids. Collectively, these findings will contribute to gaining a better understanding of targeted propionate production from FW.     

镁铁复合絮凝剂的表征及应用研究

以FeSO4、MgO和H2SO4为原料,制备了新型镁铁复合絮凝剂(PFMS),考察了PFMS的结构和Fe(Ⅲ)分布形态,为了考察自制PFMS、自制聚合硫酸铁(PFS)与工业PFS产品的絮凝性能差别,选择高岭土模拟浊度废水、直接耐晒黑G模拟染料废水和焦化废水生化出水,分别进行了去除浊度、色度和COD的絮凝实验.结果表明,Mg2+未参与聚合过程,但引入Mg2+提高了PFMS的稳定性.PFMS对浊度去除效果略高于自制PFS和工业PFS,余浊<5NTU;在碱性条件下,PFMS的脱色率、COD去除率高于自制PFS和工业PFS.