Prenatal diagnosis of Chediak-Higashi syndrome

We report the first prenatal diagnosis of an affected fetus with Chediak-Higashi syndrome (CHS). Diagnosis was accomplished via fetal blood sampling at 17 menstrual weeks and was confirmed after birth. Retrospective measurement of the largest acid phosphatase-positive lysosomes in cultured amniotic fluid cells and chorionic villus cells showed that in CHS these lysosomes are significantly larger than those in normal cells. This method may be used for prenatal diagnosis of CHS by amniocentesis and chorionic villus sampling (CVS).     

Biological Removal of Gaseous Ammonia in Biofilters: Space Travel and Earth-Based Applications

ABSTRACT

Gaseous NH₃ removal was studied in laboratory-scale biofilters (14-L reactor volume) containing perlite inoculated with a nitrifying enrichment culture. These biofilters received 6 L/min of airflow with inlet NH₃ concentrations of 20 or 50 ppm, and removed more than 99.99% of the NH₃ for the period of operation (101, 102 days). Comparison between an active reactor and an autoclaved control indicated that NH₃ removal resulted from nitrification directly, as well as from enhanced absorption resulting from acidity produced by nitrification. Spatial distribution studies (20 ppm only) after 8 days of operation showed that nearly 95% of the NH₃ could be accounted for in the lower 25% of the biofilter matrix, proximate to the port of entry. Periodic analysis of the biofilter material (20 and 50 ppm) showed accumulation of the nitrification product NO₃ ^- early in the operation, but later both NO₂ ^- and NO₃ ^- accumulated. Additionally, the N-mass balance accountability dropped from near 100% early in the experiments to ~95 and 75% for the 20- and 50-ppm biofilters, respectively. A partial contributing factor to this drop in mass balance accountability was the production of NO and N₂O, which were detected in the biofilter exhaust.     

Modeling wetland loss in coastal Louisiana: Geology,geography, and human modifications

Habitat change in coastal Louisiana from 1955/6 to 1978 was analyzed to determine the influence of geological and man-made changes on landscape patterns within 7.5 min quadrangle maps. Three quantitative analyses were used: principal components anlaysis, multiple regression analysis, and cluster analysis.Regional differences in land loss rates reflect variations in geology and the deltaic growth/decay cycles, man-induced chages in hydrology (principally canal dredging and spoil banking), and land-use changes (principally urbanization and agricultural expansion). The coastal zone is not homogeneous with respect to these variables and the interaction between causal factors leading to wetland loss is therefore locally variable and complex.The relationship between wetland loss, hydrologic changes, and geology can be described with statistically meaningful results, even though these data are insufficient to precisely quantify the relationship. However, these data support the hypothesis that the indirect impacts of man-induced changes (hydrologic and land use) may be as influential as the direct impacts resulting in converting wetlands to open water (canals) or modified (impounded) habitat.Three regions within the Louisiana coastal zone can be defined, based on the potential causal factors used in the analyses. The moderate (mean = 22%) wetland loss rates in region 1 are a result of relatively high canal density and developed area in marshes which overlie sediments of moderate age and depth; local geology acts, in this case, to lessen indirect impacts. On the other hand, wetland loss rates in region 2 are high (mean = 36%), despite fewer man-induced impacts; the potential for increased wetland loss due to both direct and indirect effects of man's activity in these areas is high. Conversely, wetland loss (mean = 20%) in region 3 is apparently least influenced by man's activity in the coastal zone because of sedimentary geology (old, thin sediments), even though these areas have already experienced significant direct habitat alteration and wetland loss.     

A test for space limitation with an application to recently settled lobsters

Space limitation in larval settlement can play an important role in the population dynamics of marine species. A novel statistical test for space limitation based on quadrat counts of individuals is described. The test is based on identifying a significant relationship between the relative dispersion of quadrat counts and overall mean density. An application to a time series of quadrat counts of recently settled American lobsters Homarus americanus covering the period 1993–2007 in Casco Bay, Maine, USA (43°45′N; 69°58′W), is presented. For this data set, the null hypothesis that space is not limiting could not be rejected (P = 0.10).     

Effect of temperature and dissolved oxygen on the growth kinetics of Pseudomonas putida F1 growing on benzene and toluene

Batch experiments were conducted to determine the effect of temperature and dissolved oxygen concentration on the rates of growth and substrate (benzene and toluene) degradation by the toluene degrading strain, Pseudomonas putida F1. Over a range of temperature from 15 to 35 degrees C the maximum specific growth rate followed the Topiwala-Sinclair relationship when either benzene or toluene served as the sole carbon and energy source. Oxygen limited growth followed Monod saturation kinetics with the specific growth rate given as a function of the dissolved oxygen concentration. The oxygen half-saturation coefficient was found to be approximately 1 mg/l regardless of whether benzene or toluene was the substrate. Similar experiments with Burkholderia (Ralstonia) pickettii PKO1 for grown on toluene revealed an oxygen half-saturation coefficient of 0.7 mg/l.     

Bleaching response of corals and their <Emphasis Type="Italic">Symbiodinium</Emphasis> communities in southern Africa

The high-latitude coral communities of southern Africa suffered minimal impacts during past mass bleaching events. Recent reports indicate an increase in bleaching frequency during the last decade, yet the actual levels of thermal stress and contributing factors in these bleaching events, and the degree of acclimatisation or adaptation on these reefs are poorly understood. During the 2005 warm-water anomaly in the southern Indian Ocean we conducted bleaching surveys and collected samples for genotyping of the algal symbiont communities at 21 sites in southern Mozambique and South Africa. Coral bleaching reached unprecedented levels and was negatively correlated with both latitude and water depths. Stylophora pistillata and Montipora were the most susceptible taxa, whereas three common branching corals had significantly different bleaching responses (Stylophora > Acropora > Pocillopora). Temperature records indicated that localised strong upwelling events coupled with persistent above-average seawater temperatures may result in accumulated thermal stress leading to bleaching. Symbiodinium in 139 scleractinian corals belonged almost exclusively to clade C, with clade D symbionts present in only 3% of the colonies. Two atypical C subclades were present in Stylophora and Pocillopora colonies and these were more abundant in shallow than deeper sites. Taxon-specific differences in bleaching responses were unrelated to different clades of algal symbionts and suggest that Symbiodinium C subtypes with diverse thermal tolerance, coupled with acclimatisation and morphology of the host colony influence the bleaching response. Additionally, the predominance of putatively thermal-sensitive Symbiodinium in southern African corals may reflect a limited experience of bleaching and emphasises the vulnerability of these reefs to moderate levels of thermal stress.     

Application of SWAT with and without Variable Source Area Hydrology to a Large Watershed

In this study, two different versions of the Soil and Water Assessment Tool (SWAT) model were used to simulate the hydrology and biogeochemical response of the Cannonsville Reservoir watershed, in New York. The first version distributes overland flow in ways that are consistent with variable source area (VSA) hydrology driven by saturation excess runoff, whereas the second version is the standard version of SWAT. These two models were each calibrated for streamflow (Flow), particulate phosphorus (PP), total dissolved phosphorus (TDP), and sediment (Sed) against measured data from the 1,200 km² Cannonsville watershed. The standard version of the model yielded an r² between the measured and simulated data of 0.85, 0.73, 0.70, and 0.72 for Flow, Sed, TDP, and PP, respectively. The VSA version yielded an r² of 0.84, 0.69, 0.72, and 0.53 for Flow, Sed, TDP, and PP, respectively. The two models were then used to determine the maximum upper bound on the reduction in phosphorus loading by removing all of the corn in the watershed. The average reductions between the two models were 65 and 37% for PP and TDP, respectively. The VSA version was also used to estimate the effect of moving corn land in the watershed from the wettest, most runoff prone areas to the driest, least runoff prone areas, which cannot be done directly with the standard SWAT model.