Concentrations and diversity of microbes from four local bioaerosol emission sources in Finland

Microbial particles can readily be released into the air from different types of man-made sources such as waste operations. Microbiological emissions from different biological sources and their dispersion may be an issue of concern for area planning and for nearby residents. This study was designed to determine the concentrations and diversity of microbiological emissions from four different man-made source environments: waste center with composting windrows, sewage treatment plant, farming environment, and cattle manure spreading. Samples of airborne particles were collected onto polyvinyl chloride filters at three distances along the prevailing downwind direction, from each source environment during a period of approximately 1 week. These samples were analyzed for 13 species or assay groups of fungi, bacterial genus Streptomyces, and Gram-positive and -negative bacteria using quantitative polymerase chain reaction (PCR). Samples for determining the concentrations of viable fungi and bacteria were collected from all environments using a six-stage impactor. The results show that there were variations in the microbial diversity between the source environments. Specifically, composting was a major source for the fungal genera Aspergillus and Penicillium, particularly for Aspergillus fumigatus, and for the bacterial genus Streptomyces. Although the microbial concentrations in the sewage treatment plant area were significantly higher than those at 50 or 200 m distance from the plant area, in the farming environment or cattle manure spreading area, no significant difference was observed between different distances from the source. In summary, elevated concentrations of microbes that differ from background can only be detected within a few hundred meters from the source. This finding, reported earlier for culturable bacteria and fungi, could thus be confirmed using molecular methods that cover both culturable and nonculturable microbial material.     

Pollinator insects benefit from rotational fallows

The importance of rotational fallows for pollinating insects in intensively cultivated farmland was studied in a three-year field experiment. The focus was on the establishment method (undersowing or seed mixture sown post-tillage), seed mixture (competitive Festuca pratensis-Phleum pratense-Trifolium pratense or less competitive Agrostis capillaris-Festuca ovina mixture) and duration (1 or 2 years) of the fallow. The seed mixture and duration affected the pollinators more than the method of establishment. Pollinator species richness was higher in fallows sown with less competitive than with competitive grasses and it increased in the second year. Stubble fields reached as high pollinator species richness already during the first year as fallows with less competitive grasses did in the second year. Pollinator abundance was highest in those treatments in which species richness of flowering plants was highest. The results suggest that the benefits of rotational fallows for pollinators increase when they are established as stubble or using seeds of less competitive grasses and when the field is fallowed for (at least) two summers.     

Behavioral variation shows heritability in juvenile brown trout Salmo trutta

Animal personalities (sometimes referred also as coping styles) and their fitness consequences are currently among the most intensively explored subjects in behavioral ecology. To estimate the evolvability and adaptability of individually consistent behavioral variation, there is a crucial need to quantify the genetics underlying personality. Here, we experimentally studied the repeatability of various individual behaviors and then estimated heritability of formed boldness, exploration, and aggression components in juvenile brown trout Salmo trutta in standardized laboratory environment. Principal component analysis indicated that individually recorded behaviors were described by two personality axes: the first reflecting boldness, exploration, and aggression and the second tendency to freeze. These personality components, as well as the originally recorded behaviors, were statistically significantly repeatable over time. The latter PC, but not the first one, was statistically significantly heritable, though at low level (h ²?=?0.142?±?0.096). These results suggest that additive genetic variation underlies phenotypically consistent behavioral patterns, proposing that any selection acting on behavior, stress tolerance, or correlated traits has a potential to induce evolution in fish personality.     

Quantitative PCR analysis of fungi and bacteria in building materials and comparison to culture-based analysis

Prolonged moisture on building materials can lead to microbial growth on them. Microbes can emit spores, metabolites and structural parts into the indoor air and thus, cause adverse health effects of people living and working in these buildings. So far, culture methods have been used for assessment of microbial contamination of building materials. In this work, we used quantitative PCR (qPCR) for the detection of selected fungal and bacterial groups in 184 building materials of different types and compared the results with culture-based analysis. Nine either commonly found species, genera or groups of fungi, or those considered as moisture damage indicators, and one bacterial genus, Streptomyces, were determined using qPCR. Fungi and mesophilic actinomycetes were also cultivated using standard media and conditions of the routine analysis. The bacterial genus Streptomyces and the fungal group Penicillium/Aspergillus/Paecilomyces were the most prevalent microbial groups in all building material types, followed by Stachybotrys chartarum and Trichoderma viride/atroviride/koningii. The highest prevalences, concentrations and species diversity was observed on wooden materials. In general, the results of the two methods did not correlate well, since concentrations of fungi and streptomycetes were higher and their occurrence more prevalent when determined by qPCR compared to culture-based results. However, with increasing concentrations, the correlation generally increased. The qPCR assay did not detect Aspergillus versicolor and Acremonium strictum as often as culture.     

Microbial secondary metabolites in school buildings inspected for moisture damage in Finland, The Netherlands and Spain

Secondary metabolites produced by fungi and bacteria are among the potential agents that contribute to adverse health effects observed in occupants of buildings affected by moisture damage, dampness and associated microbial growth. However, few attempts have been made to assess the occurrence of these compounds in relation to moisture damage and dampness in buildings. This study conducted in the context of the HITEA project (Health Effects of Indoor Pollutants: Integrating microbial, toxicological and epidemiological approaches) aimed at providing systematic information on the prevalence of microbial secondary metabolites in a large number of school buildings in three European countries, considering both buildings with and without moisture damage and/or dampness observations. In order to address the multitude and diversity of secondary metabolites a large number of more than 180 analytes was targeted in settled dust and surface swab samples using liquid chromatography/mass spectrometry (LC/MS) based methodology. While 42%, 58% and 44% of all samples collected in Spanish, Dutch and Finnish schools, respectively, were positive for at least one of the metabolites analyzed, frequency of detection for the individual microbial secondary metabolites - with the exceptions of emodin, certain enniatins and physcion - was low, typically in the range of and below 10% of positive samples. In total, 30 different fungal and bacterial secondary metabolites were found in the samples. Some differences in the metabolite profiles were observed between countries and between index and reference school buildings. A major finding in this study was that settled dust derived from moisture damaged, damp schools contained larger numbers of microbial secondary metabolites at higher levels compared to respective dust samples from schools not affected by moisture damage and dampness. This observation was true for schools in each of the three countries, but became statistically significant only when combining schools from all countries and thus increasing the sample number in the statistical analyses.     

Concentrations and Diversity of Microbes from Four Local Bioaerosol Emission Sources in Finland

ABSTRACT

Microbial particles can readily be released into the air from different types of man-made sources such as waste operations. Microbiological emissions from different biological sources and their dispersion may be an issue of concern for area planning and for nearby residents. This study was designed to determine the concentrations and diversity of microbiological emissions from four different man-made source environments: waste center with composting windrows, sewage treatment plant, farming environment, and cattle manure spreading. Samples of airborne particles were collected onto polyvinyl chloride filters at three distances along the prevailing downwind direction, from each source environment during a period of approximately 1 week. These samples were analyzed for 13 species or assay groups of fungi, bacterial genus Streptomyces, and Gram-positive and -negative bacteria using quantitative polymerase chain reaction (PCR). Samples for determining the concentrations of viable fungi and bacteria were collected from all environments using a six-stage impactor. The results show that there were variations in the microbial diversity between the source environments. Specifically, composting was a major source for the fungal genera Aspergillus and Penicillium, particularly for Aspergillus fumigatus, and for the bacterial genus Streptomyces. Although the microbial concentrations in the sewage treatment plant area were significantly higher than those at 50 or 200 m distance from the plant area, in the farming environment or cattle manure spreading area, no significant difference was observed between different distances from the source. In summary, elevated concentrations of microbes that differ from background can only be detected within a few hundred meters from the source. This finding, reported earlier for culturable bacteria and fungi, could thus be confirmed using molecular methods that cover both culturable and nonculturable microbial material.

IMPLICATIONS Concentrations and diversity of airborne microbes increase due to particle emissions from different biological waste treatment applications. However, these emissions cannot be separated from the background concentrations after more than a few hundred meters from the source. As part of a risk assessment, it may be necessary to confirm the behavior of microbial emissions from a specific source. Quantitative PCR is a useful tool for estimating total concentrations of different microbial species or groups as it detects both culturable and nonculturable microbial material.     

Shift in ectomycorrhizal community composition in Scots pine (Pinus sylvestris L.) seedling roots as a response to nickel deposition and removal of lichen cover

Scots pine seedlings were exposed to wet-deposited nickel (Ni) and removal of lichen cover in a dry heath Scots pine forest. Ni deposition affected the colonization of roots by indigenous ectomycorrhizal fungi in contrasting ways in intact and skimmed quadrats. Highest frequencies of tubercle morphotypes of ectomycorrhiza were found in quadrats exposed to 100 mg m(-2) year(-1) Ni in lichen covered treatment, while in skimmed quadrats these peaked after the treatment with 10 mg Ni m(-2) year(-1). Removal of the lichen layer increased the value of diversity index (H') of ectomycorrhizal fungal community, probably due to the increase in the evenness of the morphotype distribution. Lichen removal seemed also to improve the condition of the short roots, as the frequencies of poor and senescent short roots were decreased by the removal.     

PB uptake by ecologically dissimilar earthworm (Lumbricidae) species near a lead smelter in south Finland

The number of species and individuals, and the total biomass of earthworms decreased with decreasing distance from a lead smelter in southern Finland, as the Pb load of the soil increased. In soils highly polluted with Pb significant interspecific differences were found in the Pb concentration and the Pb concentration factor of lumbricids, whereas in slightly Pb polluted 'control' soils there were no significant interspecific differences. Near the smelter, the Pb concentration of the endogeic Aporrectodea caliginosa was higher than in the epigeic Lumbricus rubellus and L. casteneus. Pb concentration factors of these three species were lower in the highly polluted soil than in the 'control' soil, indicating that they were able to regulate their Pb accumulation. Contradicting these field observations, of the worms from the 'control' soil but reared in highly Pb polluted soil for up to 70 days, the epigeic L. castaneus, L. rubellus and Dendrodrilus rubidus took up more Pb than did the endogeic A. caliginosa and A. rosea. They also accumulated more Pb during the rearing periods than their counterparts permanently living in the highly Pb polluted soil, indicating that besides interspecific differences in Pb accumulation there seem to be intraspecific differences as well. Acclimatization and/or genotype differences can underlie earthworms' adaptation to Pb polluted soil, where they may have dissimilar physiological pathways to cope with high soil Pb concentrations. The amount of Pb rendered available to a local food chain by a population of earthworms will depend on the ability of the worms to accumulate Pb in their tissues, which in turn, is a function of the population's history of Pb exposure. Species such as A. caligonosa, which accumulate and continuously withstand high Pb concentrations in their tissues, are most appropriate for biomonitoring.