Bacterial colonization of the phyllosphere of nineteen plant species and antimicrobial activity of their leaf secondary metabolites against leaf associated bacteria

Summary. The scope of this work was to examine whether leaf constitutive secondary metabolites play a role in determining bacterial colonization of the phyllosphere. To this aim, we surveyed nineteen native or cultivated plant species that share a common bacterial pool in a North Mediterranean area, and estimated the size of total and ice nucleation active (INA) bacterial populations on their leaves. Large differences in the colonization of their phyllosphere were found; the population size of epiphytic bacteria ranged from 7.5 × 10² to 1 × 10⁶ CFU/g fresh weight, in eucalypt and celery, respectively. Species native in Mediterranean-type climate areas, particularly those belonging to the group of aromatic plants, are characterized by scarce presence of INA bacteria. The antibacterial activity of essential oils, surface phenolics and leaf tissue extracts was also estimated against the INA strains P. syringae and E. herbicola, isolated from two of these plant species. E. herbicola proved more sensitive than P. syringae. Of the species examined, oregano [Origanum vulgare L. subsp. hirtum (Link.) Ietswaart], an aromatic plant, had the highest antimicrobial activity, whereas six species showed no activity at all. Further experiments were performed with oregano and bean (Phaseolus vulgaris L.) that represent two extremes in their secondary metabolite content. Both plants were inoculated with P. syringae. By the end of incubation, the bacterial population on bean plants was about 100 times higher than that on oregano leaves. Scanning electron micrographs showed that bacterial growth on oregano leaves was confined to sites away from glandular hairs. Results from the bacterial colonization survey together with those from the toxicity tests showed that all species rich in antibacterial secondary metabolites harbored low leaf bacterial populations. These results provide substantial evidence that leaf secondary metabolites function as constitutive defense chemicals against microbial invasions. However, the fact that species with non- or moderately active leaf secondary metabolites are not always highly colonized suggests mediation of other unknown factors, the contribution of which requires further investigation.     

Influence of different organic amendments on the degradation, metabolism, and adsorption of terbuthylazine

The behavior of the herbicide terbuthylazine (TA) was studied in a clay loam soil after the addition of different organic amendments (OAs). Addition of poultry compost (PC) and urban sewage sludge (USS) retarded degradation of TA with half-life values of 60.3 and 73.7 d, respectively. In contrast, addition of corn straw (CS) did not significantly alter the degradation of TA (half-life 55.5 d) compared with its degradation in nonamended soils (half-life 57.3 d). Sterilization of amended and nonamended soils resulted in a partial inhibition of TA degradation, indicating that biotic and abiotic processes are involved in TA degradation in soil. Degradation of TA led to the formation of desethyl-terbuthylazine, which was detected in low amounts (<8% of the initially applied TA) in all soils. Adsorption of TA was relatively low, with Kd values ranging from 2.31 L kg(-1) in the nonamended soil to 3.93 L kg(-1) in the soil amended with USS. In general, Kd values increased with increasing soil organic carbon content. The dissolved organic matter extracted from the OAs did not appear to interact with the pesticide or the soil surfaces, suggesting that it would not probably facilitate herbicide transport. Desorption studies indicated a slight hysteresis of TA desorption in the amended soils compared with TA desorption in the nonamended soil, which was entirely reversible. These findings might have practical implications for the environmental fate of TA in agricultural soils, where the studied OAs are commonly used.     

Enhanced microbial degradation of cadusafos in soils from potato monoculture: demonstration and characterization

Rapid degradation of cadusafos was evident in soils collected from previously-treated field sites from a potato monoculture area in northern Greece. The slower degradation of cadusafos observed in corresponding antibiotic-treated soils as well as in soils from an adjacent previously-untreated field demonstrated the microbial involvement in the rapid degradation of cadusafos in the soils from the previously-treated sites. Application of the non-specific antibacterial antibiotic chloramphenicol or of the Gram+ bacteria-inhibiting antibiotics penicillin + lyncomycin + vancomycin significantly inhibited the rapid biodegradation of cadusafos suggesting that soil bacteria and probably Gram+ bacteria are mainly responsible for the rapid biodegradation of cadusafos in the specific soil. Further experiments showed that the bacterial population of the cadusafos-adapted soil was also able to rapidly degrade the chemically related nematicide ethoprophos but not fenamiphos and oxamyl. This is the first report of the occurrence of enhanced biodegradation of cadusafos in potato fields. In addition, the finding of cross-enhancement between cadusafos and ethoprophos significantly reduces the number of available chemicals which could be alternated to prevent the development of enhanced biodegradation and thus intensifies the problem in potato monoculture areas like the one in northern Greece.     

The dissipation of three fungicides in a biobed organic substrate and their impact on the structure and activity of the microbial community

Biopurification systems (BPS) have been introduced to minimise the risk for point source contamination of natural water resources by pesticides. Their depuration efficiency relies mostly on the high biodegradation of their packing substrate (biomixture). Despite that, little is known regarding the interactions between biomixture microflora and pesticides, especially fungicides which are expected to have a higher impact on the microbial community. This study reports the dissipation of the fungicides azoxystrobin (AZX), fludioxonil (FL) and penconazole (PC), commonly used in vineyards, in a biomixture composed of pruning residues and straw used in vineyard BPS. The impact of fungicides on the microbial community was also studied via microbial biomass carbon, basal respiration and phospholipid fatty acid analysis. AZX dissipated faster (t _1/2?=?30.1 days) than PC (t _1/2?=?99.0 days) and FL (t _1/2?=?115.5 days). Fungicides differently affected the microbial community. PC showed the highest adverse effect on both the size and the activity of the biomixture microflora. A significant change in the structure of the microbial community was noted for PC and FL, and it was attributed to a rapid inhibition of the fungal fraction while bacteria showed a delayed response which was attributed to indirect effects by the late proliferation of fungi. All effects observed were transitory and a full recovery of microbial indices was observed 60 days post-application. Overall, no clear link between pesticide persistence and microbial responses was observed stressing the complex nature of interactions between pesticides in microflora in BPS.     

Leaching of the organophosphorus nematicide fosthiazate

Fosthiazate is an organophosphorus nematicide which was recently included in Annex I of the Directive 91/414/EEC under the clause that it should be used with special care in soils vulnerable to leaching. Thus, the leaching of fosthiazate was investigated in columns packed with three different soils which represented situations of high (site 2), intermediate (site 1) and low (site 3) leaching potential. The recommended dose of fosthiazate was applied at the surface of the soil columns and fosthiazate fate and transport was investigated for the next two months. Fosthiazate concentrations in the leachate collected from the bottom of the columns packed with soil from site 2 exceeded 0.1 microgl(-1) in most cases. This soil was characterized as acidic, indicating longer fosthiazate persistence, with low organic matter content, indicating weak adsorption, thus representing a situation vulnerable to leaching. In contrast, the lowest concentrations of fosthiazate in the leachate were evident in the columns packed with soil from site 3. This soil was characterized as alkaline, indicating faster degradation, with higher organic matter content, indicating stronger adsorption, thus representing a situation not favoring leaching of fosthiazate. The highest concentration of fosthiazate in the leachate from the columns packed with soil from site 2 was 3.44 microgl(-1) compared to 1.17 and 0.16 microgl(-1), which were the corresponding maximum values measured in columns packed with soil from sites 1 and 3, respectively. The results of the current study further suggest that fosthiazate is mobile in soil and can leach under conducive soil conditions like acidic soils with low organic matter content.