Behavior of pesticide residues in agricultural soil and adjacent River Kuywa sediment and water samples from Nzoia sugarcane belt in Kenya

An inventory survey conducted to determine pesticide usage in a sub-catchment of the Nzoia sugarcane belt found a variety of pesticides used in the sub-catchment, which are reported in this paper. Analysis of soil samples from seven fallow experimental field plots left uncultivated for various periods from 3 to 96?months after cultivation with pesticide application indicated persistence of high concentrations of pesticide residues in the soil, with estimated soil half-lives (in years) ranging from 0.72 to 57.75 for organochlorines and from 1.13 to 8.25 for herbicides. The mean water concentrations (in ??g/L) of the pesticide residues in River Kuywa, which flows through the Nzoia Nucleus Estate sugarcane farms, ranged from 0.12 (lindane) to 1.36 (p,p??-DDT) for organochlorines and from 0.14 (atrazine) to 1.75 (diuron) for herbicides during the heavy rains period in August 2008 while the mean sediment concentrations (in ??g/g) ranged from 0.28 (lindane) to 1.87 (endrin) for organochlorines and 0.39 (hexazinone) to 4.61 (alachlor) for herbicides. The mean concentrations of residues in water during the light rain period in December 2008 ranged from 0.17 (p,p??-DDT) to 0.71 (aldrin) for organochlorines and 0.01 (atrazine) to 1.74 (alachlor) for herbicides while the sediment concentrations ranged from 0.38 (p,p??-DDT) to 1.145 (aldrin) for organochlorines and 0.74 (atrazine) to 1.98 (alachlor) for herbicides. Although DDT, aldrin, dieldrin, and endrin were not reported in the survey, their presence in the fallow experimental field plot soils and in River Kuywa water and sediment could indicate previous application, lack of recorded data or illegal usage since 1997 when they were banned. Notably, the concentrations of alachlor, diuron, cypermethrin, and hexazinone in the water column were substantial indicating their extensive usage and residual persistence in the sub-catchment, with subsequent wash-off and leaching into River Kuywa. The concentration levels of some of the individual pesticides exceeded the EU limit requirements for drinking water and indicated potential risk to humans and cattle if the water is used without treatment.     

Biodegradation of carbofuran in soils within Nzoia River Basin,Kenya

Carbofuran (2,3-dihydro-2,2-dimethylbenzofuran-7-yl methylcarbamate) has been used within the Nzoia River Basin (NRB), especially in Bunyala Rice Irrigation Schemes, in Kenya for the control of pests. In this study, the capacity of native bacteria to degrade carbofuran in soils from NRB was investigated. A gram positive, rod-shaped bacteria capable of degrading carbofuran was isolated through liquid cultures with carbofuran as the only carbon and nitrogen source. The isolate degraded 98% of 100-μg mL^?1 carbofuran within 10 days with the formation of carbofuran phenol as the only detectable metabolite. The degradation of carbofuran was followed by measuring its residues in liquid cultures using high performance liquid chromatography (HPLC). Physical and morphological characteristics as well as molecular characterization confirmed the bacterial isolate to be a member of Bacillus species. The results indicate that this strain of Bacillus sp. could be considered as Bacillus cereus or Bacillus thuringiensis with a bootstrap value of 100% similar to the 16S rRNA gene sequences. The biodegradation capability of the native strains in this study indicates that they have great potential for application in bioremediation of carbofuran-contaminated soil sites.     

Study of atrazine degradation in soil from Kenyan sugarcane-cultivated fields in controlled laboratory conditions

A study to compare the extent of atrazine mineralization in soils from Kenyan sugarcane-cultivated fields with and without history of atrazine use was carried out in the laboratory under controlled conditions. The study was testing the hypothesis that repeated atrazine application to soil will not result in enhanced atrazine mineralization. The study was carried out with ¹⁴C-uniformly ring-labeled atrazine in a laboratory under controlled conditions. Atrazine mineralization to ¹⁴CO₂ in soil with no history of atrazine use was negligible (0.16%) after 163 days of soil incubation. The three metabolites hydroxyatrazine, desisopropylatrazine, and desethylatrazine in the proportion of 17.7%, 1.3%, and 2.6%, respectively, were in the soil after 75 days. In the soil from the sugarcane-cultivated field with history of atrazine use, atrazine mineralization was 89.9% after 98 days. The same soil, amended with mature compost, showed a lag phase of eight days before rapid atrazine mineralization was observed.     

Degradation characteristics of metribuzin in soils within the Nzoia River Drainage Basin,Kenya

Metribuzin, a triazinone herbicide, is heavily used within the expansive Nzoia River Drainage Basin in Kenya for the optimization of sugarcane yields. For field experiments, soils were spiked with metribuzin and amended with filter mud compost and Tithonia diversifolia leaves. Soils with history of metribuzin application (48 months) were also spiked with metribuzin but not amended with the organic materials. Degradation of metribuzin for the three variants was followed for a period of 102 days. Repeated exposure of metribuzin to soil and addition of filter mud compost to soil enhances the degradation of metribuzin with half dissipation times of 31 and 25 days. In soil amended with Tithonia diversfolia leaves, the half dissipation time was 32 days while in the control (unamended non history soil), it was 36 days. Laboratory studies showed that soil sterilization slowed the degradation of metribuzin, with a half dissipation time of 154 days. This confirmed that metribuzin was biochemically degraded in soil by an adapted community of microbes.     

The dissipation of hexazinone in tropical soils under semi-controlled field conditions in Kenya

The dissipation of hexazinone (Velpar) in two tropical soil types in Kenya was studied under field and semi-controlled conditions for a period of 84 days. The dissipation was found to be very rapid and this could be attributed to adverse weather conditions including high initial rainfall as well as to low soil-organic-matter content, volatilization, surface run-off and biodegradation. The DT₅₀ values of dissipation obtained by first order kinetics were 20 days and 21.3 days in clay and loam soil types, respectively. The influence of bargasse compost (1000 μg/g dry soil) was also studied and was found to enhance dissipation to some extent, giving DT₅₀ values of 18 days and 18.3 days in clay and loam soil types, respectively.     

Biodegradation of s-triazine herbicide atrazine by Enterobacter cloacae and Burkholderia cepacia sp. from long-term treated sugarcane-cultivated soils in Kenya

In this study soils from sugarcane-cultivated fields were screened for bacterial species capable of atrazine (6-chloro-N2-ethyl-N?-isopropyl-1,3,5-triazine-2,4-diamine) degradation due to long exposure of the soils to this herbicide. To enrich for atrazine degraders, Minimal Salt Medium containing atrazine as the sole N source and glucose as the C source was inoculated with soils impacted with this herbicide and incubated. Bacterial growth was monitored by measuring optical density. The degradation of atrazine was followed by measuring residual atrazine in liquid cultures over a given time period by high performance liquid chromatography. Bacterial strains isolated from the enrichment cultures were characterized by biochemical tests and identified by 16S rRNA gene sequencing. Two bacterial strains coded ISL 8 and ISL 15 isolated from two different fields were shown to have 94 and 96% 16S rRNA gene sequence similarity to Burkholderia cepacia respectively. Another bacterial sp., ISL 14 was closely related to Enterobacter cloacae with a 96% 16S rRNA gene sequence similarity. There was not much difference between the extents of atrazine degradation by the enrichment cultures with communities (79-82% applied amount) from which pure strains were isolated and the pure strains themselves in liquid cultures that showed a degradation of 53-83% of applied amount. The study showed existence of bacterial strains in different sugarcane-cultivated fields which can use atrazine as a nitrogen source. The bacterial strains isolated can be used to enhance the degradation of atrazine in contaminated soils where atrazine is still considered to be recalcitrant.     

Effect of fluctuating soil humidity on in situ bioavailability and degradation of atrazine

This study elucidates the effect of fluctuating soil moisture on the co-metabolic degradation of atrazine (6-chloro-N²-ethyl-N⁴-isopropyl-1,3,5-triazine-2,4-diamine) in soil. Degradation experiments with ¹⁴C-ring-labelled atrazine were carried out at (i) constant (CH) and (ii) fluctuating soil humidity (FH). Temperature was kept constant in all experiments. Experiments under constant soil moisture conditions were conducted at a water potential of −15 kPa and the sets which were run under fluctuating soil moisture conditions were subjected to eight drying-rewetting cycles where they were dried to a water potential of around −200 kPa and rewetted to −15 kPa. Mineralization was monitored continuously over a period of 56 d. Every two weeks the pesticide residues in soil pore water (PW), the methanol-extractable pesticide residues, the non-extractable residues (NER), and the total cell counts were determined. In the soil with FH conditions, mineralization of atrazine as well as the formation of the intermediate product deisopropyl-2-hydroxyatrazine was increased compared to the soil with constant humidity. In general, we found a significant correlation between the formation of this metabolite and atrazine mineralization. The cell counts were not different in the two experimental variants. These results indicate that the microbial activity was not a limiting factor but the mineralization of atrazine was essentially controlled by the bioavailability of the parent compound and the degradation product deisopropyl-2-hydroxyatrazine.     

Biodegradation of s-triazine herbicide atrazine by Enterobacter cloacae and Burkholderia cepacia sp. from long-term treated sugarcane-cultivated soils in Kenya

In this study soils from sugarcane-cultivated fields were screened for bacterial species capable of atrazine (6-chloro-N²-ethyl-N⁴-isopropyl-1,3,5-triazine-2,4-diamine) degradation due to long exposure of the soils to this herbicide. To enrich for atrazine degraders, Minimal Salt Medium containing atrazine as the sole N source and glucose as the C source was inoculated with soils impacted with this herbicide and incubated. Bacterial growth was monitored by measuring optical density. The degradation of atrazine was followed by measuring residual atrazine in liquid cultures over a given time period by high performance liquid chromatography. Bacterial strains isolated from the enrichment cultures were characterized by biochemical tests and identified by 16S rRNA gene sequencing. Two bacterial strains coded ISL 8 and ISL 15 isolated from two different fields were shown to have 94 and 96% 16S rRNA gene sequence similarity to Burkholderia cepacia respectively. Another bacterial sp., ISL 14 was closely related to Enterobacter cloacae with a 96% 16S rRNA gene sequence similarity. There was not much difference between the extents of atrazine degradation by the enrichment cultures with communities (79–82% applied amount) from which pure strains were isolated and the pure strains themselves in liquid cultures that showed a degradation of 53–83% of applied amount. The study showed existence of bacterial strains in different sugarcane-cultivated fields which can use atrazine as a nitrogen source. The bacterial strains isolated can be used to enhance the degradation of atrazine in contaminated soils where atrazine is still considered to be recalcitrant.