Responses of soil ammonia oxidizers to a short-term severe mercury stress

The responses of soil ammonia-oxidizing archaea(AOA) and ammonia-oxidizing bacteria(AOB) to mercury(Hg) stress were investigated through a short-term incubation experiment.Treated with four different concentrations of Hg(CK,Hg25,Hg50,and Hg100,denoting 0,25,50,and 100 mg Hg/kg dry soil,respectively),samples were harvested after 3,7,and 28 day incubation.Results showed that the soil potential nitrification rate(PNR) was significantly inhibited by Hg stress during the incubation.However,lower abundances of AOA(the highest in CK: 9.20 × 10~7 copies/g dry soil; the lowest in Hg50: 2.68 × 10~7 copies/g dry soil) and AOB(the highest in CK: 2.68 × 10~7 copies/g dry soil; the lowest in Hg50:7.49 × 10~6 copies/g dry soil) were observed only at day 28 of incubation(P 0.05).Moreover,only the community structure of soil AOB obviously shifted under Hg stress as seen through DGGE profiles,which revealed that 2–3 distinct AOB bands emerged in the Hg treatments at day 28.In summary,soil PNR might be a very useful parameter to assess acute Hg stress on soil ecosystems,and the community structure of soil AOB might be a realistic biological indicator for the assessment of heavy metal stress on soil ecosystems in the future.     

Underwater towed video: a useful tool to rapidly assess elasmobranch populations in large marine protected areas

Elasmobranch stock assessment studies are usually made through fisheries surveys data. However, in large marine protected areas (MPAs) the use of destructive techniques must be dismissed in order to avoid population impacts. In 2005, while conducting a marine habitat survey in two marine Special Areas of Conservation (Sebadales de Playa de Inglés and Franja Marina de Mogán) in south Gran Canary Island (Canary Islands, Spain) with underwater towed video (UTV) and underwater visual census (UVC) transects, we recognized the opportunity rose to assess elasmobranch populations through UTV. Number of observed species and specimens, overall field work effort and total surveyed area were determined and compared between methods. Mean observations per day per unit of time (MOPUT) and mean observations per day per unit of surveyed area (MOPUA) were also compared through Mann–Whitney rank sum statistical test (α = 0.05). Data analysis demonstrated that UTV is a very useful tool to rapidly assess elasmobranch populations in large MPAs in good visibility underwater environments. It can assess larger areas than UVC with the same effort (statistically significant difference found for the MOPUT; p =< 0.001), leading to more observed species (5 vs 2) and specimens (46 vs 3) per day of work, with no loss in resolution power (MOPUA values were not significantly different between UTV and UVC; p = 0.104).     

Using simulation to explore the functional relationships of terrestrial carnivore population indices

Population indices based on visits to detection stations commonly are used to monitor wildlife populations. Inferences about populations are based on 1 of 2 measures: (1) change in the proportion of stations visited at least once or (2) change in the cumulative number of visits by unique individuals. The functional relationships between index responses and population density is poorly understood and can lead to misinterpretation of index data when an incorrect functional relationship (e.g. linear) is assumed. We created a flexible simulation environment to study the response of detection-based population indices under a wide variety of conditions meant to reflect species life history and study design. Proportional indices exhibited non-linear saturating responses to changes in population density while cumulative indices responded linearly. Shapes of responses were functions of home range sizes, individual detection probabilities, and spatial arrangement of animals and sampling stations. Non-linear relationships of proportional indices lead to under-estimation of mean population density when data are aggregated from multiple detection stations deployed in a heterogeneous landscape. Cumulative indices have significant statistical advantages over proportional indices including smaller sample sizes required to detect density change, linearity, consistent index responses across a wide range of densities, and ability to aggregate data to meet minimum sample size requirements. Our simulation provides a flexible tool for the interpretation of station-based population indices.     

Continuous-time capture-recapture population estimation when capture probabilities vary over time

Closed capture-recapture (CR) estimators have been used extensively to estimate population size. Most closed CR approaches have been developed and evaluated for discrete-time models, but there has been little effort to evaluate their continuous-time counterparts. Continuous-time estimators — developed using maximum likelihood theory by Craig (1953) and Darroch (1958), and martingale theory by Becker (1984) — that allow capture probabilities to vary over time were evaluated using Monte Carlo simulation. Overall, the ML estimators had a smaller MSE. The estimators performed well when model assumptions were upheld, and were somewhat robust to heterogeneity in capture probabilities. However, the estimators were not robust to behavioural effects in the capture probabilities. Time lag effects (periods when animals might be unavailable for immediate recapture) on continuous-time estimates were also investigated and results indicated a positive bias which was greater for smaller populations. There was no gain in performance when using a continuous-time estimator versus a discrete-time estimator on the same simulated data. Usefulness of the continuous-time approach may be limited to study designs where animals are easier to sample using continuous-time methodology.     

Distribution and abundance of western gray whales during a seismic survey near Sakhalin Island, Russia

Exxon Neftegas Limited, operator of the Sakhalin-1 consortium, is developing oil and gas reserves on the continental shelf off northeast Sakhalin Island, Russia. DalMorNefteGeofizika (DMNG), on behalf of the Sakhalin-1 consortium, conducted a 3-D seismic survey of the Odoptu license area during 17 August–9 September 2001. A portion of the primary known feeding area of the endangered western gray whale (Eschrichtius robustus) is located adjacent to the seismic block. The data presented here were collected as part of daily monitoring to determine if there was any measurable effect of the seismic survey on the distribution and abundance of western gray whales. Mitigation and monitoring program included aerial surveys conducted between 19 July and 19 November using the methodology outlined by the Southern California High Energy Seismic Survey team (HESS). These surveys provided documentation of the distribution, abundance and bottom feeding activity of western gray whales in relation to seismic survey sounds. From an operations perspective, the aerial surveys provided near real-time data on the location of whales in and outside the feeding area, and documented whether whales were displaced out of an area normally used as feeding habitat. The objectives of this study were to assess (a) temporal changes in the distribution and abundance of gray whales in relation to seismic survey, and (b) the influence of seismic survey, environmental factors, and other variables on the distribution and abundance of gray whales within their preferred feeding area adjacent to Piltun Bay. Multiple regression analysis revealed a limited redistribution of gray whales southward within the Piltun feeding area when the seismic survey was fully operational. A total of five environmental and other variables unrelated to seismic survey (date and proxies of depth, sea state and visibility) and one seismic survey-related variable (seg3d, i.e., received sound energy accumulated over 3 days) had statistically significant effects on the distribution and abundance of gray whales. The distribution of two to four gray whales observed on the surface (i.e., about five to ten whales in total) has likely been affected by the seismic survey. However, the total number of gray whales observed within the Piltun feeding area remained stable during the seismic survey. M. W. Newcomer, Deceased.     

Weather-driven changes in population density determine wing dimorphism in a bush-cricket species

Long-winged (macropterous) individuals that are capable of flight in predominantly short-winged (flightless) species can considerably affect population dynamics and range expansion. Understanding the triggers that determine macropterism is crucial for understanding whether the dispersal ability of species allows them to shift their distributions through fragmented landscapes or in response to climate change. From 2002 to 2009, we studied population densities and wing dimorphism (macroptery) of Metrioptera roeselii, on 62 plots in central Germany. In the first step, we used a generalized linear mixed-effects model to assess the variables that influence macroptery. Macroptery rates are strongly positively correlated with bush-cricket abundance and not with vegetation structure and habitat moisture. Populations with macropters had significantly higher densities than those without. In the second step, we analysed the relationship between population densities and several mesoclimate/weather parameters. Densities were positively correlated with warm and dry weather conditions during hatching time in April, and previous year weather is less important than present year weather. In the light of the ongoing range expansion of M. roeselii in large parts of Europe, our results support the hypothesis that at high latitudes macropterism and range expansion are indirectly caused by weather-driven changes in population densities.     

Estimating biodiversity impacts without field surveys: A case study in northern Borneo

In many regions of the world, biodiversity surveys are not routinely conducted prior to activities that lead to land conversion, such as development projects. Here we use top-down methods based on global range maps and bottom-up methods based on macroecological scaling laws to illuminate the otherwise hidden biodiversity impacts of three large hydroelectric dams in the state of Sarawak in northern Borneo. Our retrospective impact assessment finds that the three reservoirs inundate habitat for 331 species of birds (3 million individuals) and 164 species of mammals (110 million individuals). A minimum of 2100 species of trees (900 million individuals) and 17 700 species of arthropods (34 billion individuals) are estimated to be affected by the dams. No extinctions of bird, mammal, or tree species are expected due to habitat loss following reservoir inundation, while 4–7 arthropod species extinctions are predicted. These assessment methods are applicable to any data-limited system undergoing land-use change.

Electronic supplementary material

The online version of this article (doi:10.1007/s13280-015-0683-3) contains supplementary material, which is available to authorized users.     

陆源有机污染对舟山海域大型底栖生物分布的影响

2009年4月对舟山海域进行了25个站位的底栖生物调查,结合同期进行初级生产力、海水水质等的调查数据,分析了初级生产力、富营养化等环境因子对舟山海域大型底栖生物分布的影响。结果表明,舟山海域大型底栖生物共获得84种,多毛类是主要优势类群。舟山海域大型底栖生物平均生物量为11.62g/m²,平均丰度为208.5个/平方米,多样性指数(H')为1.64。舟山海域大型底栖生物的生物量、丰度和多样性指数均呈现由近岸向外海递增的趋势。应用相关性统计分析表明,舟山海域大型底栖生物的分布与海水化学耗氧量(COD)、无机氮(DIN)、磷酸盐(DIP)、富营养化指数和底层溶解氧(DO)存在显著负相关;与初级生产力、盐度和透明度存在显著正相关。说明陆源有机污染、盐度、透明度、初级生产力和底层溶解氧是影响舟山海域大型底栖生物分布的主要因素,其中陆源有机污染是最主要的影响因素。     

The abundance,characteristics and diversity of microplastics in the South China Sea: Observation around three remote islands

• A high abundance of floating MPs was found in the southern South China Sea. • Transparent film and fiber were predominant in water and organisms, respectively. • 84.7% of floating MPs and 54.5% of MPs in vivo belonged to PP and PE. • Characteristics of MP in organisms were different from those of inshore ones. Surrounded by emerging markets with considerable plastic consumption, the South China Sea has been a focus area of microplastic research. A survey on the floating microplastics (>0.3 mm) and microplastics ingested by fish and mollusks was conducted around three remote islands here. Compared with the results from several previous studies, a high abundance of floating microplastics (with a median of 1.9 × 10⁵ items/km² or 0.7 items/m³) was observed, revealing another “hot spot” for microplastics. Polyolefin, especially polypropylene, was the main component. The diversity index and evenness index were calculated and evaluated based on the composition of microplastics. The characteristic peaks of Raman spectra concerning pigmented microplastics were provided. Transparent sheets/films were predominant in the water sample, which was quite different from a similar study in this sea area (8.9% for film), and only 16.4% of floating microplastics (>0.3 mm) were fibers/lines, implying that the main sources of floating microplastics (>0.3 mm) might be household/agricultural consumption activities. The transparent fiber/line was also dominant in organisms. It is suggested that the main sources of microplastics ingested by organisms might be both fabric fibers and fishing/aquaculture.     

Distribution and abundance of western gray whales off northeastern Sakhalin Island, Russia, 2001’003

In 2001–2003, >60,000 km of aerial surveys and 7,700 km of vessel surveys were conducted during June to November when critically endangered Korean–Okhotsk or western gray whales (Eschrichtius robustus) were present off the northeast coast of Sakhalin Island, Russia. Results of surveys in all years indicated gray whales occurred in predominantly two areas, (1) adjacent to Piltun Bay, and (2) offshore from Chayvo Bay, hereafter referred to as the Piltun and offshore feeding areas. In the Piltun feeding area, the majority of whales were observed in waters shallower than 20 m and were distributed from several hundred meters to ∼ 5 km from the shoreline. In the offshore feeding area during all years, the distribution of gray whales extended from southwest to northeast in waters 30–65 m in depth. During all years, the distribution and abundance of whales changed in both the Piltun and offshore feeding areas, and both north–south and inshore–offshore movements were documented within and between feeding seasons. The discovery of a significant number of whales feeding in the offshore area each year was a substantial finding of this study and raises questions regarding western gray whale abundance and population levels, feeding behavior and ecology, and individual site-fidelity. Fluctuations in the number of whales observed within the Piltun and offshore feeding areas and few sightings outside of these two areas indicate that gray whales move between the Piltun and offshore feeding areas during their summer–fall feeding season. Seasonal shifts in the distribution and abundance of gray whales between and within both the Piltun and offshore feeding areas are thought, in part, to be a response to seasonal changes in the distribution and abundance of prey. However, the mechanism driving the movements of whales along the northeast coast of Sakhalin Island is likely very complex and influenced by a multitude of factors. *Deceased