Environmental Monitoring and Assessment of a Great River Ecosystem: The Upper Missouri River Pilot

Most Great River ecosystems (GREs) are extensively modified and are not receiving adequate protection to prevent further habitat degradation and loss of biotic integrity. In the United States, ecological monitoring and assessment of GREs has lagged behind streams and estuaries, and the management of GREs is hampered by the lack of unbiased data at appropriate spatial scales. Properties of GREs that make them challenging to monitor and assess include difficult sample logistics and high habitat diversity. The U.S. Environmental Protection Agency’s Environmental Monitoring and Assessment Program (EMAP) has developed a comprehensive, regional-scale, survey-based monitoring approach to assessment of streams and estuaries, but has not yet conducted research on applying these tools to GRE monitoring. In this paper we present an overview of an EMAP research project on the Upper Missouri River (UMR). We summarize the assessment objectives for the study, the design for selecting sample locations, the indicators measured at these sites and the tools used to analyze data. We present an example of the type of statements that can be made with EMAP monitoring data. With modification, the set of methodologies developed by EMAP may be well suited for assessment of GREs in general.     

Assessing Landscape Condition Relative to Water Resources in the Western United States: A Strategic Approach

The Environmental Monitoring and Assessment Program (EMAP) is proposing an ambitious agenda to assess the status of streams and estuaries in a 12-State area of the western United States by the end of 2003. Additionally, EMAP is proposing to access landscape conditions as they relate to stream and estuary conditions across the west. The goal of this landscape project is to develop a landscape model that can be used to identify the relative risks of streams and estuaries to potential declines due to watershed-scale, landscape conditions across the west. To do so, requires an understanding of quantitative relationships between landscape composition and pattern metrics and parameters of stream and estuary conditions. This paper describes a strategic approach for evaluating the degree to which landscape composition and pattern influence stream and estuary condition, and the development and implementation of a spatially-distributed, landscape analysis approach.     

Using Information on Spatial Variability of Small Estuaries in Designing Large-Scale Estuarine Monitoring Programs

In the early 1990s, EPA's Environmental Monitoring and Assessment Program (EMAP) documented the ecological condition of the overall population of small estuaries along the mid-Atlantic coast of the United States. However, the Program did not provide detailed information on the condition of individual estuaries less than 260 km² in surface area, a group of estuaries of concern to environmental managers. To address the needs of environmental managers, when EMAP returned to the region in summer 1997, it included a study of the spatial variability of ecological indicators within individual small estuaries. At 127 probability-based sites in 10 estuaries, EMAP measured a variety of parameters of water quality and sediments, including dissolved oxygen (DO), nutrients, grain size of sediments, contaminants in sediments, and community structures of benthic macroinvertebrates. From this information the ecological condition (e.g., percent area with DO concentrations below 5mg L^–1) for each estuary, along with 90% confidence interval, was determined. The width of the confidence interval was then recalculated for sample sizes ranging from two stations to the total number of stations sampled in that estuary. Confidence interval widths were then plotted against sample size. These plots can be useful in designing future regional monitoring programs with a goal of describing conditions in individual systems as well as broad geographic regions. Results illustrate that beyond five stations per estuary, the reduction in the width of the confidence interval with increasing sampling intensity is relatively small; however, individual program managers need to determine "how small is small enough."     

The role of sample surveys for monitoring the condition of the nation's lakes

In order to meet a growing need to determine the condition of the nation's ecosystems and how their condition is changing, the U.S. Environmental Protection Agency (EPA) developed EMAP, the Environmental Monitoring and Assessment Program. A common survey design serves as the foundation on which to base monitoring of status and trends among diverse ecosystem types. In this paper, we describe the need for a statistically based survey design, briefly summarize the basic EMAP design, describe how that design is tailored for the selection of a probability sample of lakes on which to make measurements of lake condition, and illustrate the process for selecting a sample of lakes in the northeastern United States. Finally, we illustrate how measurements taken on the sample of lakes can be summarized, with known uncertainty, to describe the condition of a population of lakes.The U.S. Government right to retain a non-exclusive, royalty free licence in and to any copyright is acknowledged.     

Linking Monitoring and Effects Research: EMAP's Intensive Site Network Program

The EMAP program has been organized into three primary elements: Multi-Tier Design, Indicators, and Index Sites. The Index Sites program (DISPro - Demonstration Intensive Site Project) is the primary activity within the Index Sites element of EMAP. This project represents an inter-agency effort between EPA/ORD and DOI/NPS to develop a demonstration of an intensive site network of monitoring and research locations throughout the United States, utilizing the Nation's parklands as "outdoor laboratories." Twelve parks were selected to establish this demonstration. These 12 parks were selected because they are readily accessible, have a history of monitoring environmental information, and represent a broad spectrum of ecological communities. EMAP, through DISPro, is examining whether a "network" of sites existing within the parks can be used to address monitoring issues for global-scale environmental stressors (e.g., air pollution) as well as locale-specific stressors (e.g., air deposition, water-borne) and coordinated with cause-effect, issue-based research related to these environmental stressors. As a first activity, EPA will provide each of the sites with the instrumentation to monitor UV-B. The intent of the program is to initiate a consistent air monitoring program at each site to be followed by consistent monitoring within other media. The project will initiate research projects at all the sites (eventually) to examine the effects of environmental stressors of importance at each of the sites.     

How Probability Survey Data Can Help Integrate 305(b) and 303(d)Monitoring and Assessment of State Waters

Section 305(b) of the United States’ Clean Water Act (CWA) requires states to assess the overall quality of waters in the states, while Section 303(d) requires states to develop a list of the specific waters in their state not attaining water quality standards (a.k.at impaired waters). An integrated, efficient and cost-effective process is needed to acquire and assess the data needed to meet both these mandates. A subset of presentations at the 2002 Environmental Monitoring and Assessment Program (EMAP) Symposium provided information on how probability data, tools and methods could be used by states and other entities to aid in development of their overall assessment of condition and list of impaired waters. Discussion identified some of the technical and institutional problems that hinder the use of EMAP methods and data in the analysis to identify impaired waters as well as development needs to overcome these problems.     

Towards a protocol for stream macroinvertebrate sampling in China

Standard protocols are critical for maximizing data comparability and aggregation in national monitoring programs, and taxa richness is a common indicator of site condition and biological diversity. There are two general approaches for sampling stream macroinvertebrate assemblages: targeted richest habitat and site wide. At seven sites, we compared three methods: Ontario Benthic Biomonitoring Network (OBBN), Environmental Monitoring and Assessment Program (EMAP), and Rapid Bioassessment Protocol (RBP). The OBBN method produced a biased sample at a site with a single small riffle, the RBP method produced the most total taxa, and the EMAP method produced the most taxa at four sites and the most individuals at six sites. The RBP method produced asymptotes for percent tolerant individuals, percent chironomid individuals, and Hilsenhoff Biotic Index score after five to ten stations. The EMAP method produced asymptotes for those metrics after 10 to 20 stations per site. The EMAP method typically required half the number of stations as the RBP method to obtain 70–90% of true taxa richness as estimated by the Jaccard coefficient. We conclude that the EMAP method is preferable because of its greater precision in taxa richness estimates.     

Integrated response plot designs for indicators of desertification

The improvement of land management practices on lands susceptible to desertification requires information on the status and condition of the existing resources as well as any change occurring in the resource condition over time. The Environmental Monitoring and Assessment Program (EMAP) of the U.S. Environmental Protection Agency has developed a statistical survey design for monitoring the condition of ecological resources on large spatial scales. EMAP-Rangelands used a uniformity sampling study in 1993 to evaluate response plot designs for three categories of indicators (soils, vegetation, and spectral reflectance) to be used for monitoring ecological condition of a site. The response plot design study was developed to integrate on-site measurements for the three indicator categories. The study was conducted on the Colorado Plateau in southern Utah in three rangeland resource classes (grassland, desertscrub, and conifer woodland) of differing productivity levels in an attempt to develop a common plot design for all three resource classes. Basic measurement units were developed to facilitate integration of data collection. Preliminary spatial analysis of the sampling study found considerable differences in variation patterns among the study sites and measurement categories for the indicator classes used by EMAP-Rangelands. Evidence of substantial trends in the indicator measurements on monitoring sites relative to regional trends leads to the conclusion that nonstationary spatial models for biological processes on a monitoring site may be needed to fulfill the requirements for developing plot designs and indicator criteria.The U.S. Environmental Protection Agency, through the Office of Research and Development, funded the research described here. This paper has been subjected to the Agency's peer and administrative review and has been approved as an EPA publication. The U.S. Government has the right to retain a nonexclusive, royalty-free license in and to any copyright covering this article.     

A process for selecting indicators for monitoring conditions of rangeland health

This paper reports on a process for selecting a suite of indicators that, in combination, can be useful in assessing the ecological conditions of rangelands. Conceptual models that depict the structural and functional properties of ecological processes were used to show the linkages between ecological components and their importance in assessing the status and trends of ecological resources on a regional scale. Selection criteria were developed so that relationships could be assessed at different spatial scales using ground and aerial measurements. Parameters including responsiveness and sensitivity to change, quality assurance and control, temporal and spatial variability, cost-effectiveness and statistical design played an important role in determining how indicators were selected. A total of ten indicator categories were selected by a committee of scientists for evaluation in the program. A subset that included soil properties, vegetation composition and abundance, and spectral properties was selected for evaluation in a pilot test conducted in 1992 in the Colorado Plateau region of the southwestern United States. This work is part of a major effort being undertaken by the U.S. Environmental Protection Agency and its collaborators to assess the condition of rangelands (primarily comprised of arid, semi-arid and dry subhumid ecosystems) along with seven other ecosystem groups (forests, agricultural lands, wetlands, surface waters, landscapes, estuaries and Great Lakes) as part of a national Environmental Monitoring and Assessment Program (EMAP). The indicator selection process reported upon was developed to support EMAP's goal of providing long-term, policy-relevant research focusing on evaluating the ecological condition (or health) of regional and national resources.     

The Ecological Condition of Gulf of Mexico Resources from Perdido Key to Port St. Joe, Florida, USA: Part I. Coastal Beach Resources

Using the approach established by EPA's Environmental Monitoring and Assessment Program (EMAP), a shoreline monitoring survey was conducted in August and September 1999, encompassing the Florida Panhandle from Perdido Key, Florida to Port St. Joe, Florida. The objective of this survey was to demonstrate the use of a probabilistic survey for monitoring and estimating the condition of swimmable beach areas. Thirty stations were sampled using a probabilistic sampling design. Hydrographic data were collected in addition to samples for water chemistry. Bacterial indicators, enterococci and fecal coliforms, were enumerated from the water according to the EPA Beaches Environmental Assessment Closure and Health (BEACH) Program and Florida state guidelines. Additional criteria for site condition included the presence or absence of primary and secondary dunes, anthropogenic debris and vegetation. Based on EMAP evaluation guidelines and Florida state criteria, a baseline assessment of the condition of the Gulf of Mexico beach resources surveyed is presented.     

Designing a Spatially Balanced, Randomized Site Selection Process for Regional Stream Surveys: The EMAP Mid-Atlantic Pilot Study

In 1993, the U.S. Environmental Protection Agency (EPA), as part of the Environmental Monitoring and Assessment Program (EMAP), initiated a sample survey of streams in the mid-Atlantic. A major objective of the survey was to quantify ecological condition in wadeable streams across the region. To accomplish this goal, we selected 615 stream sites using a randomized sampling design with some restrictions. The design utilized the digitized stream network taken from 1:100,000-scale USGS topographic maps as the sample frame. Using a GIS, first- through third-order (wadeable) stream segments in the sample frame were randomly laid out in a line and sampled at fixed intervals after a random start. We used a variable probability approach so that roughly equal numbers of first-, second-, and third-order stream sites would appear in the sample. The sample design allows inference from the sample data to the status of the entire 230,400 km of wadeable stream length in the mid-Atlantic study area. Of this mapped stream length, 10% was not in the target population because no stream channel existed (4%), the stream channel was dry (5%), or the stream was not wadeable (1%). We were unable to collect field data from another 10% of the mapped stream length due to lack of access (mostly landowner denials). Thus, the field data we collected at 509 sites allows inference to the ecological condition for 184,600 km of the mapped stream length in the region.     

Critical Sampling Points Methodology: Case Studies of Geographically Diverse Watersheds

Only with a properly designed water quality monitoring network can data be collected that can lead to accurate information extraction. One of the main components of water quality monitoring network design is the allocation of sampling locations. For this purpose, a design methodology, called critical sampling points (CSP), has been developed for the determination of the critical sampling locations in small, rural watersheds with regard to total phosphorus (TP) load pollution. It considers hydrologic, topographic, soil, vegetative, and land use factors. The objective of the monitoring network design in this methodology is to identify the stream locations which receive the greatest TP loads from the upstream portions of a watershed. The CSP methodology has been translated into a model, called water quality monitoring station analysis (WQMSA), which integrates a geographic information system (GIS) for the handling of the spatial aspect of the data, a hydrologic/water quality simulation model for TP load estimation, and fuzzy logic for improved input data representation. In addition, the methodology was purposely designed to be useful in diverse rural watersheds, independent of geographic location. Three watershed case studies in Pennsylvania, Amazonian Ecuador, and central Chile were examined. Each case study offered a different degree of data availability. It was demonstrated that the developed methodology could be successfully used in all three case studies. The case studies suggest that the CSP methodology, in form of the WQMSA model, has potential in applications world-wide.     

Environmentally stratified sampling design for the development of Great Lakes environmental indicators

Understanding the relationship between human disturbance and ecological response is essential to the process of indicator development. For large-scale observational studies, sites should be selected across gradients of anthropogenic stress, but such gradients are often unknown for a population of sites prior to site selection. Stress data available from public sources can be used in a geographic information system (GIS) to partially characterize environmental conditions for large geographic areas without visiting the sites. We divided the U.S. Great Lakes coastal region into 762 units consisting of a shoreline reach and drainage-shed and then summarized over 200 environmental variables in seven categories for the units using a GIS. Redundancy within the categories of environmental variables was reduced using principal components analysis. Environmental strata were generated from cluster analysis using principal component scores as input. To protect against site selection bias, sites were selected in random order from clusters. The site selection process allowed us to exclude sites that were inaccessible and was shown to successfully distribute sites across the range of environmental variation in our GIS data. This design has broad applicability when the goal is to develop ecological indicators using observational data from large-scale surveys.     

Sampling over time: developing a cost effective and precise exposure assessment program

Studies requiring ambient exposure assessments invariably ask: How often should measurements be taken? Answer to such questions is dictated by budgetary considerations as well as spatial and temporal variability in the data. For example, do we obtain measurements during all seasons, all months within seasons, weeks within months and days within weeks? On one hand, we can obtain a one-time snapshot sample and regard it as representing the "true" mean exposure. On the other hand, we may obtain a large number of measurements over time and then average these in order to represent this "true" mean exposure. The former estimate is the least expensive but may also be the least precise while the latter, may be very precise but prohibitively costly. In this paper, we demonstrate how a pilot study can be undertaken with a potentially promising and feasible sampling plan for the full-scale study. By applying the statistical methodology of variance component analysis (VCA) to the pilot study data and exploiting mathematical relationship between the variance of the overall mean exposure and posited variance components, we can develop a sampling design with decreased sampling costs and/or increased precision of the mean exposure. Our approach was applied to determine sampling design choices for an on-going study that aimed at assessing ambient particulate matter exposure. We conclude that a pilot study followed by the VCA analysis may often lead to sampling design choices that offer considerable cost savings and, at the same time, promise to provide relatively precise estimates of the mean exposure for the subsequent full-scale study.     

跨界河流的水质监测(2)

水质监测是任何水资源管理必不可少的组成部分,水质监测与评价不仅可对水污染问题进行鉴别和评估,而且可以验证污染控制措施是否正确以及污染源是否遵守了相关的环保法规、制度。文章讨论了综合监测系统的对策、网络设计、采样与分析、数据处理与报告,还讨论了必需的科学的组织形式。以4条跨界河流[欧洲的莱茵河(Rhine)和多瑙河(Danube)、南美的拉普拉塔河(La Plata)、东南亚的湄公河(Mekong)]为例阐述了现代意义的监测方法学。对于工业化程度高的流域(如莱茵河和多瑙河),早期预警系统尤为重要。最后探讨了新的性价比好的污染监测方法以及如何避免产生数据很多,但信息量很少的状况。     

跨界河流的水质监测(1)

水质监测是任何水资源管理必不可少的组成部分,水质监测与评价不仅可对水污染问题进行鉴别和评估,而且可以验证污染控制措施是否正确以及污染源是否遵守了相关的环保法规、制度、文章讨论了综合监测系统的对策、网络设计、采样与分析、数据处理与报告,还讨论了必需的科学的组织形式。以4条跨界河流[欧洲的莱茵河(Rhine)和多瑙河(Danube)、南美的拉普拉塔河(La Plata)、东南亚的湄公河(Mekong)]为例阐述了现代意义的监测方法学。对于工业化程度高的流域(如莱茵河和多瑙河),早期预警系统尤为重要。最后探讨了新的性价比好的污染监测方法以及如何避免产生数据很多,但信息量很少的状况。     

Development of a Quality-Assessed Agrichemical Database For Monitoring Anthropogenic Impacts on Ground-Water Quality

The Quality–Assessed Agrichemical Contaminant Database for Nebraska Ground Water is a unique repository of nitrate and pesticide data collected by federal, state, and local agencies. Each contaminant concentration in the database has been evaluated based upon well–defined criteria that address completeness of the well–attribute data, analytical method and field and laboratory quality control practices and assigned to one of five quality levels. The quality assessment level always accompanies the contaminant concentration so that the end–user knows the quality assurance effort expended in the acquisition of the data, can select comparable data, and choose data whose quality assurance effort is commensurate with project objectives. The database can be viewed and queried on–line; downloaded in its entirety; or imported to a spreadsheet or a geographic information system. Setting criteria for data quality and assessing the level of quality have resulted in significant increases in the percentages of high quality (Levels 3–5) nitrate and pesticide data. These high quality data presently constitute 52% of the nitrate and 55% of the pesticide data.     

Optimal Sampling and Problematic Likelihood Functions in a Simple Population Model

Markov chains provide excellent statistical models for studying many natural phenomena that evolve with time. One particular class of continuous-time Markov chain, called birth–death processes, can be used for modelling population dynamics in fields such as ecology and microbiology. The challenge for the practitioner when fitting these models is to take measurements of a population size over time in order to estimate the model parameters, such as per capita birth and death rates. In many biological contexts, it is impractical to follow the fate of each individual in a population continuously in time, so the researcher is often limited to a fixed number of measurements of population size over the duration of the study. We show that, for a simple birth–death process, with positive Malthusian growth rate, subject to common practical constraints, there is an optimal schedule for measuring the population size that minimises the expected confidence region of the parameter estimates. Throughout our exposition of the optimal experimental design, we compare it to a simpler equidistant design, where the population is sampled at regular intervals. This is an experimental design worthy of comparison since it can represent a much simpler design to implement in practice. In order to find optimal experimental designs for our population model, we make use of a combination of useful statistical machinery. Firstly, we use a Gaussian diffusion approximation of the underlying discrete-state Markov process, which allows us to obtain analytical expressions for Fisher’s information matrix (FIM), which is crucial to optimising the experimental design. We also make use of the cross-entropy method of stochastic optimisation for the purpose of maximising the determinant of FIM to obtain the optimal experimental designs. Our results show that the optimal schedule devised by others for a simple model of population growth without death can be extended, for large populations, to the two-parameter model that incorporates both birth and death. For the simple birth–death process, we find that the likelihood surface is also problematic and poses serious problems for point estimation and easily defining confidence regions. A Bayesian approach to inference is proposed as a way in which these problems could be circumvented.     

Use of earth observation satellite data for land degradation mapping and monitoring in Mediterranean ecosystems: Towards a satellite-observatory

The degradation of the permanent seminatural vegetation and the resulting acceleration of soil degradation and erosion processes constitute major elements of land degradation in the Mediterranean basin. Given the European Commission's interest in mapping and controlling desertification phenomena in the Mediterranean member states, the Environmental Mapping and Modelling Unit (EMAP) of the Joint Research Centre is investigating possibilities for using operational earth observation satellites for mapping and repeated monitoring of vegetation and soil characteristics. In the context of previous experiments, approaches have been developed that can already be routinely applied to large regions. This paper discusses the problems of standardized retrieval of remotely sensed primary parameters (such as reflectance), concepts relating to the thematic interpretation of reflectance data, and the definition of satellite-derived degradation indices. In addition, this paper presents requirements for designing an operational satellite observatory for monitoring Mediterranean land degradation.