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二氧化硫胁迫下拟南芥miRNA表达谱分析   总被引:1,自引:0,他引:1  
以拟南芥为材料,利用高通量测序技术并结合生物信息学分析方法,检测二氧化硫(SO_2)处理后拟南芥植株的小分子RNA表达谱,筛选SO_2胁迫响应microRNAs(miRNAs)分子,研究植物miRNAs对逆境胁迫的应答机制.结果发现,30 mg·m~(-3) SO_2处理72 h后,拟南芥地上组织小分子RNA长度分布发生改变,在对照组和SO_2组中均有大量特有的小分子RNA序列,说明SO_2胁迫可诱导拟南芥小分子RNA的表达改变.SO_2胁迫诱导186个保守miRNA和16个新miRNA分子差异表达,其靶基因主要涉及转录调控、信号转导、代谢、刺激响应等生理过程.差异表达的miR160和miR393可通过生长素信号途径调控植株生长发育,参与植物对SO_2的胁迫响应.本研究揭示了植物中参与SO_2胁迫应答的miRNA种类及作用机制,进一步阐明了miRNAs在植物抗逆应答过程中的作用.  相似文献   
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The uterotrophic assay has been commonly used to test environmental estrogens in vivo, however, it is often not sensitive enough sometimes. An alternative way is to evaluate estrogenicity through biomarker genes. MicroRNA (miRNA) is a class of regulatory gene, which has been shown to be a good biomarker for many diseases and toxicological effects in recent years, and some evidences showed that estrogen induced response was partially mediated by miRNAs. In this study, two types of microarrays were used to test the 17[3-estradiol (E2) induced miRNA expression profile at different time points in the immature mouse uterus. Statistical analysis showed the aldehyde slide based array had less variation than the amino slide based array, and 11 dysregulated miRNAs were screened out for significant fold change. Real-time PCR was performed to further confirm that 4 out of 7 selected miRNAs, namely miR-451, miR-155, miR-335- 5p, and miR-365, are E2 regulated miRNAs in the uterus. The function of the predicted targets of these miRNAs is involved in cell grow control, which is consistent with the main E2 function in the uterus. MiR-451 had similar strong responses to E2 in the uterus of both immature and overiectomized mice, and could be a potential biomarker for estrogenicity in the uterus.  相似文献   
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为探讨全氟辛烷磺酸盐(PFOS)产生肺毒性的分子机制,采用细胞计数试剂盒(CCK-8)方法测定不同浓度PFOS对A549细胞活性的影响,并用二代测序方法测定PFOS暴露对A549细胞中miRNAs表达的影响,预测异常表达miRNAs的靶基因.通过生物信息学分析推断靶基因参与的信号通路及潜在的生物学功能.结果显示,低浓度PFOS(<00μmol/L)促进A549细胞增殖,高浓度PFOS抑制细胞增殖.暴露于300μmol/L PFOS中24h的A549细胞中108个miRNAs表达量显著上调,63个miRNAs表达量显著下调.差异表达miRNAs通过Ras、Rap1、HIF-1、ErbB和VEGF等信号通路参与细胞增殖、代谢和发育等生物学过程.这表明PFOS可通过影响细胞增殖和诱发炎症反应对肺造成威胁.  相似文献   
4.
为探讨PFOS胚胎期及哺乳期暴露对动物子代学习记忆能力影响的分子机理,采用微小RNA(miRNA)芯片技术检测PFOS胚胎期及哺乳期暴露对出生第1和7天大鼠脑组织miRNA表达的影响,分析突触可塑性相关miRNA表达的差异变化。结果显示,经PFOS暴露后出生第1和7天的大鼠脑组织中分别有24和17个miRNA发生显著性差异表达(p<0.05),其中与突触传递和神经递质转运等相关的miRNA的差异表达最为显著,主要包括miR-466b、miR-672、miR-297、miR-674-3p和miR-207。差异表达miRNA的路径分析显示出生后1和7d的大鼠的长时程增强效应(LTP)均受PFOS显著影响(p<0.05),这说明PFOS胚胎期及哺乳期暴露可能通过影响LTP的形成、发展和维持过程对大鼠子代大脑学习记忆能力造成威胁,并且miR-466b、miR-672、miR-297、miR-674-3p和miR-207可能参与了其中的调控过程。  相似文献   
5.
MicroRNA (miRNA) plays a crucial role in gene expression regulation. However, no data are available on change of miRNA expression of zebrafish (Danio rerio) after treatment with pesticides. We evaluated the effect of fipronil (5-amino-1-[2, 6-dichloro-4-(trifluoromethyl) phenyl]-4-[(trifluoromethyl) sulfinyl]-1H-pyrazole-3-carbonitrile) and triazophos (3-(O, O-diethyl)-1-phenyl thiophosphoryl-1, 2, 4-triazol) and their mixture on miRNA expression in zebrafish. MiRNA expression profiles in zebrafish were altered after treatment with these chemicals. An association between these chemicals and the expression of 21 miRNAs was found 96 h after treatment. Among them, 14 miRNAs were differentially expressed due to the treatments with fipronil, triazophos and their mixture; 5 miRNAs showed altered expression level after treatment with formulations of these chemicals; miR-29b and miR-738 were differentially expressed after treatment with adjuvants. MiRNAs might present a novel toxicological response that could be used as a toxicological biomarker and have a different direction for future investigations of their association with miRNAs involved in chemical related diseases.  相似文献   
6.
Many studies have focused on environmental estrogen-related diseases. However, no consistent gene markers or signatures for estrogenicity have been discovered in mammals. This study investigated the estrogenic effects of 17β-estradiol on the prostate in immature male mice. Consistent U-shaped responses were seen in bodyweight, ventral prostate epithelial morphology, and miRNA expression levels. Specifically, most estradiol regulated miRNAs were downregulated at low doses of estradiol (0.2 and 2 mg·kg–1), and whose expression returned to the control level at a larger dose (200 mg·kg–1). The function of these regulated miRNAs is related to the prostate cancer and PI3K-Akt signaling pathways, which is consistent with the function of estradiol. Furthermore, the miRNA-processing machinery, Drosha, in the prostate was also regulated in a similar pattern, which could be a part of the U-shaped miRNA expression mechanism. All of these data indicate that the prostate is a reliable organ for evaluating estrogenic activity and that the typical nonmonotonic dose-response relationship could be used as a novel biomarker for estrogenicity.
  相似文献   
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