Estimation of abundance from presence–absence maps using cluster models

A presence–absence map consists of indicators of the occurrence or nonoccurrence of a given species in each cell over a grid, without counting the number of individuals in a cell once it is known it is occupied. They are commonly used to estimate the distribution of a species, but our interest is in using these data to estimate the abundance of the species. In practice, certain types of species (in particular flora types) may be spatially clustered. For example, some plant communities will naturally group together according to similar environmental characteristics within a given area. To estimate abundance, we develop an approach based on clustered negative binomial models with unknown cluster sizes. Our approach uses working clusters of cells to construct an estimator which we show is consistent. We also introduce a new concept called super-clustering used to estimate components of the standard errors and interval estimators. A simulation study is conducted to examine the performance of the estimators and they are applied to real data.     

From poverty trap to ecosystem service curse

In spite of broad and positive expectations, payments for ecosystem services (PES) can bring about unexpected and negative consequences, especially in terms of their impacts on the well-being of local communities dependent on ecosystems. Based on numerous observations of recurring problems with PES, we put forward an ecosystem service curse hypothesis (Kronenberg and Hubacek in Ecol Soc 18:art.10. doi: 10.5751/ES-05240-180110, 2013), that points to counterintuitive negative development outcomes for countries and regions rich in ecosystem services. The social and economic problems that we have been able to depict in many PES schemes reflect the persistence of maladaptive states in pursuit of sustainability. Instead of providing an opportunity to break out of poverty, these problems reflect entrapment, which is most often related to poor quality of institutions. Here we highlight the linkages between the ecosystem service curse hypothesis and the dynamic system stability landscapes discussed in this special issue. Our article consists of three parts in which we: (1) present the original ecosystem service curse hypothesis; (2) link this hypothesis to the broader discussions relevant to sustainability science; and (3) highlight the context of traps on which this special feature focuses.     

Landscape changes as a factor affecting the course and consequences of extreme floods in the Otava river basin, Czech Republic

The paper presents the analysis of anthropogenical modifications of the landscape in relation to the course and consequences of floods. The research was conducted in the Otava river basin which represents the core zone of the extreme flood in August 2002 in Central Europe. The analysis was focused on the key indicators of landscape modification potentially affecting the runoff process - the long-term changes of land-use, changes of land cover structure, land drainage, historical shortening of the river network and the modifications of streams and floodplains. The information on intensity and spatial distribution of modifications was derived from different data sources - historical maps, available GIS data, remote sensing and field mapping. The results revealed a high level of spatial diversity of anthropogenical modifications in different parts of the river basin. The intensive modifications in most of indicators were concentrated in the lowland region of the river basin due to its agricultural use; however important changes were also recorded in the headwater region of the basin. The high spatial diversity of the modifications may result in their varying effect on the course and consequences of floods in different parts of the river basin. This effect is demonstrated by the cluster analysis based on the matrix of indicators of stream and floodplain modification, physiogeographical characteristics and geomorphological evidences of the flood in August 2002, derived from the individual thematic layers using GIS.     

Spatial-temporal variability of aerosol sources based on chemical composition and particle number size distributions in an urban settlement influenced by metallurgical industry

Environmental Science and Pollution Research - The Moravian-Silesian region of the Czech Republic with its capital city Ostrava is a European air pollution hot spot for airborne particulate matter...     

Using nematodes in soil ecotoxicology

Nematodes represent a very abundant group of soil organisms and non-parasitic species are important for soil quality and in the soil food web. In recent years, it has been shown that nematodes are appropriate bioindicators of soil condition and they are also suitable organisms for laboratory toxicity testing. The aims of this paper are to overview and critically assess methods and approaches for researching soil nematode ecotoxicology. In natural ecosystems, nematode abundance and community structure analyses were proved to be sensitive indicators of stress caused by soil pollutants and ecological disturbance. Community structure analyses may be approached from a functional or ecological point of view; species are divided into groups according to their feeding habits or alternatively the maturity index is calculated according to their ecological strategy. Many environmental factors have the potential to affect nematode community, which consequently results in high space and time variability. This variance is major handicap in field ecotoxicological studies because pollutant-nematode relationships are obscured. For prospective risk assessment of chemicals, several toxicity tests with nematodes were developed and are increasingly used. Sensitivity of these tests is comparable to tests with other soil species (e.g. enchytraeids, earthworms and springtails) while tests are less demanding to space and time. Most studies have focused on metal toxicity but organic compounds are almost overlooked. Endpoints used in tests were often mortality, reproduction or movement, but more sublethal endpoints such as feeding or biomarkers have been used recently too. Although there is an increasing amount of knowledge in soil nematode ecotoxicology, there is still a lot of various issues in this topic to research.     

Impact of soluble organic matter and particulate organic matter on anammox system: Performance,microbial community and N2O production

In this study,the effects of soluble readily biodegradable COD (sCOD) and particulate slowly biodegradable COD (pCOD) on anammox process were investigated.The results of the longterm experiment indicated that a low sCOD/N ratio of 0.5 could accelerate the anammox and denitrification activity,to reach as high as 84.9%±2.8% TN removal efficiency.Partial denitrification-anammox (PDN/anammox) and denitrification were proposed as the major pathways for nitrogen removal,accounting for 91.3% and 8.7% o...     

Environmental Impacts of the Use of Ecosystem Services: Case Study of Birdwatching

The main reason for promoting the concept of ecosystem services lies in its potential to contribute to environmental conservation. Highlighting the benefits derived from ecosystems fosters an understanding of humans’ dependence on nature, as users of ecosystem services. However, the act of using ecosystem services may not be environmentally neutral. As with the use of products and services generated within an economy, the use of ecosystem services may lead to unintended environmental consequences throughout the ‘ecosystem services supply chain.’ This article puts forward a framework for analyzing environmental impacts related to the use of ecosystem services, indicating five categories of impact: (1) direct impacts (directly limiting the service’s future availability); and four categories of indirect impacts, i.e., on broader ecosystem structures and processes, which can ultimately also affect the initial service: (2) impacts related to managing ecosystems to maximize the delivery of selected services (affecting ecosystems’ capacity to provide other services); (3) impacts associated with accessing ecosystems to use their services (affecting other ecosystem components); (4) additional consumption of products, infrastructure or services required to use a selected ecosystem service, and their life-cycle environmental impacts; and (5) broader impacts on the society as a whole (environmental awareness of ecosystem service users and other stakeholders). To test the usefulness of this framework, the article uses the case study of birdwatching, which demonstrates all of the above categories of impacts. The article justifies the need for a broader consideration of environmental impacts related to the use of ecosystem services.     

In search for a compromise between biodiversity conservation and human health protection in restoration of fly ash deposits: effect of anti-dust treatments on five groups of arthropods

Recently, fly ash deposits have been revealed as a secondary refuge of critically endangered arthropods specialised on aeolian sands in Central Europe. Simultaneously, these anthropogenic habitats are well known for their negative impact on human health and the surrounding environment. The overwhelming majority of these risks are caused by wind erosion, the substantial decreasing of which is thus necessary. But, any effects of anti-dust treatments on endangered arthropods have never been studied. We surveyed communities of five arthropod groups (wild bees and wasps, leafhoppers, spiders, hoverflies and orthopteroid insects) colonising three fly ash deposits in the western Czech Republic. We focused on two different anti-dust treatments (~70 and 100 % cover of fly ash by barren soil) and their comparison with a control of bare fly ash. Altogether, we recorded 495 species, including 132 nationally threatened species (eight of them were considered to be extinct in the country) and/or 30 species strictly specialised to drift sands. Bees and wasps and leafhoppers contained the overwhelming majority of species of the highest conservation interest; a few other important records were also in spiders and orthopteroids. Total soil cover depleted the unique environment of fly ash and thus destroyed the high conservation potential of the deposits. On the other hand, partial coverage (with ~30 % of bare fly ash) still offered habitats for many of the most threatened species, as we showed by both regression and multivariate analyses, with a decrease of wind erosion. This topic still needs much more research interest, but we consider mosaic-like preservation of smaller spots of fly ash as one of the possible compromises between biodiversity and human health.     

Comparing spatial conservation prioritization methods with site- versus spatial dependency-based connectivity

Larval dispersal is an important component of marine reserve networks. Two conceptually different approaches to incorporate dispersal connectivity into spatial planning of these networks exist, and it is an open question as to when either is most appropriate. Candidate reserve sites can be selected individually based on local properties of connectivity or on a spatial dependency-based approach of selecting clusters of strongly connected habitat patches. The first acts on individual sites, whereas the second acts on linked pairs of sites. We used a combination of larval dispersal simulations representing different seascapes and case studies of biophysical larval dispersal models in the Coral Triangle region and the province of Southeast Sulawesi, Indonesia, to compare the performance of these 2 methods in the spatial planning software Marxan. We explored the reserve design performance implications of different dispersal distances and patterns based on the equilibrium settlement of larvae in protected and unprotected areas. We further assessed different assumptions about metapopulation contributions from unprotected areas, including the case of 100% depletion and more moderate scenarios. The spatial dependency method was suitable when dispersal was limited, a high proportion of the area of interest was substantially degraded, or the target amount of habitat protected was low. Conversely, when subpopulations were well connected, the 100% depletion was relaxed, or more habitat was protected, protecting individual sites with high scores in metrics of connectivity was a better strategy. Spatial dependency methods generally produced more spatially clustered solutions with more benefits inside than outside reserves compared with site-based methods. Therefore, spatial dependency methods potentially provide better results for ecological persistence objectives over enhancing fisheries objectives, and vice versa. Different spatial prioritization methods of using connectivity are appropriate for different contexts, depending on dispersal characteristics, unprotected area contributions, habitat protection targets, and specific management objectives. Comparación entre los métodos de priorización de la conservación espacial con sitio y la conectividad espacial basada en la dependencia     

Active methods of mercury removal from flue gases

Due to its adverse impact on health, as well as its global distribution, long atmospheric lifetime and propensity for deposition in the aquatic environment and in living tissue, the US Environmental Protection Agency (US EPA) has classified mercury and its compounds as a severe air quality threat. Such widespread presence of mercury in the environment originates from both natural and anthropogenic sources. Global anthropogenic emission of mercury is evaluated at 2000 Mg year⁻¹. According to the National Centre for Emissions Management (Pol. KOBiZE) report for 2014, Polish annual mercury emissions amount to approximately 10 Mg. Over 90% of mercury emissions in Poland originate from combustion of coal.

The purpose of this paper was to understand mercury behaviour during sub-bituminous coal and lignite combustion for flue gas purification in terms of reduction of emissions by active methods. The average mercury content in Polish sub-bituminous coal and lignite was 103.7 and 443.5 μg kg⁻¹. The concentration of mercury in flue gases emitted into the atmosphere was 5.3 μg m⁻³ for sub-bituminous coal and 17.5 μg m⁻³ for lignite. The study analysed six low-cost sorbents with the average achieved efficiency of mercury removal from 30.6 to 92.9% for sub-bituminous coal and 22.8 to 80.3% for lignite combustion. Also, the effect of coke dust grain size was examined for mercury sorptive properties. The fine fraction of coke dust (CD) adsorbed within 243–277 μg Hg kg⁻¹, while the largest fraction at only 95 μg Hg kg⁻¹. The CD fraction < 0.063 mm removed almost 92% of mercury during coal combustion, so the concentration of mercury in flue gas decreased from 5.3 to 0.4 μg Hg m⁻³. The same fraction of CD had removed 93% of mercury from lignite flue gas by reducing the concentration of mercury in the flow from 17.6 to 1.2 μg Hg m⁻³. The publication also presents the impact of photochemical oxidation of mercury on the effectiveness of Hg vapour removal during combustion of lignite. After physical oxidation of Hg in the flue gas, its effectiveness has increased twofold.