Sedentary or mobile? Variability in space and depth use of an exploited coral reef fish

Movement of fishes defines the distribution and abundance of populations and occurs on a range of spatial and temporal scales. To successfully parameterise assessments and design management strategies for exploited fish populations, knowledge and consideration of their movement patterns are essential. Since the efficacy of management approaches vary depending on the sedentary or mobile nature of the target species, presence, space use and depth utilisation were examined to understand the movement patterns of redthroat emperor Lethrinus miniatus. Sixty individuals were monitored for up to 12 months in an acoustic array comprising three coral reefs, and variation in space use and movement patterns was observed among 26 individuals. Half of the individuals were recorded only in proximity of one receiver along the reef edge, while the other half were detected at multiple receivers and used horizontal areas of approximately 4 km². Periods of non-detection and lower detection frequency at night (χ ₁ ²  = 342.157, P < 0.001) indicated individuals may move away from the monitored reef edge to the adjacent sandy habitat, but most movements outside the array remain unknown. Long-distance movement was recorded for one individual, recaptured ~160 km from the release location. Generally, no trends in depth use were apparent, L. miniatus inhabited a variety of depths, which were not related to individual size or time of day, yet some effect of month was evident. Variation in movement among adult L. miniatus indicates that while some individuals undergo broader-scale movement, spatial closures that cover individual reefs (>4 km²) could provide protection from fishing for the proportion of the population that displayed high site fidelity and moderate-sized activity spaces (over a period of up to 12 months).     

Growing of trees in home-gardens by rural households in the Eastern Cape and Limpopo Provinces,South Africa

Trees provide a wide range of goods and services to rural households which, when incorporated into their livelihood strategies, help reduce their vulnerability to adversity. Governments and policy makers often ignore the contribution made by trees and consequently resources are focussed on cash crops and livestock. Villagers in the Eastern Cape and Limpopo Province, South Africa utilise a range of trees from home-gardens for various purposes, although predominantly for fruit and shade. Trees are either planted or actively retained in households' home-gardens. There were noticeable differences between the villages in the Eastern Cape and those in Limpopo Province, particularly with respect to the overall density of trees per hectare and the number of species per household, both being significantly greater in Limpopo Province. The five most preferred species were listed for each village, revealing a preference for exotic fruit trees in Limpopo Province and a mix of exotic fruit trees and shade trees in the Eastern Cape. Households also retained useful indigenous species, predominantly fruit-bearing species. A range of factors constrain tree growing in home-gardens and households engage in practices to grow and maintain their trees. Not all of these constraints and practices were significantly different between the various localities.     

Sperm storage reflects within- and extra-pair mating opportunities in a cooperatively breeding bird

In passerine birds, storage and maturation of sperm takes place in the cloacal protuberance (CP), an external swelling of the reproductive organ. The considerable variation in CP size among species is presumed to be a consequence of varying levels of sperm-competition, but whether individual variation in CP size within a species also reflects sperm competition is not well established. Here, we study temporal variation in male CP size in relation to within-pair and extra-pair mating opportunities and cuckoldry risk in purple-crowned fairy-wrens Malurus coronatus. This is a socially monogamous cooperatively breeding passerine that can breed year-round and has low levels of extra-pair paternity (in 6?% of broods). We show that male CP size sharply increased a few weeks before, and rapidly regressed after his partner laid eggs, consistent with a cost of its maintenance and/or sperm production. Surprisingly, despite low levels of extra-pair paternity, CP size of non-breeding and pre-breeding males was positively correlated with the number of breeding females in the population, suggesting that CP size is sensitive to extra-pair mating opportunities. However, CP sizes do not seem to reflect cuckoldry risk: CP size of dominant males was unaffected by the presence of a subordinate that was unrelated to the dominant female, although those subordinates occasionally sire offspring, and had a larger CP than subordinates living with their mother. Our results suggest that, even in a species with low levels of extra-pair paternity, individual investment in sperm storage reflects both within-pair and, albeit to lesser extent, extra-pair mating opportunities.     

Maternal allocation of lipid classes and fatty acids with seasonal egg production in Atlantic cod (Gadus morhua) of wild origin

A suite of characteristics is often used to assess egg quality as these properties potentially play important roles in progeny survival and growth. Our objective was to assess egg characteristics including lipid biocomposition of an iteroparous, batch-spawning teleost of wild origin. Maternal allocation to egg number was generally dome-shaped (5 of 8 females) and egg size declined over the breeding season for eight breeding pairs of wild Atlantic cod (Gadus morhua) (n = 43 batches). Egg lipid composition ranged considerably among females and between egg batches within females (e.g., phospholipids 40–86 %; polar 47–87 % and neutral lipids 15–52 % of total lipids; polyunsaturated fatty acids 16–50 % of total fatty acids). Principal component analyses revealed significant inter-relationships among maternal traits, batch sequence and fecundity, and egg size and composition. Seasonal trends with regard to lipid deposition were variable; three females showed consistent declines in lipid parameters (μg egg⁻¹) with both batch number and egg diameter, one female showed consistent increase and the four remaining females showed no trend. The three females that exhibited seasonal declines in egg lipid content were characterized as having high fertilization success (>75 %). Our findings highlight the variability in lipid allocation to eggs of batch spawners of wild origin and characterize the composition of endogenous reserves available during embryogenesis and yolk sac larval stages.     

Release,Dispersion, and Resuspension of Escherichia coli From Direct Fecal Deposits Under Controlled Flows1

Abstract: Water‐quality standards have been placed on fecal indicator organisms such as Escherichia coli in an attempt to limit the concentrations in water bodies. Cattle can be a significant source of bacteria to water systems, particularly when they are allowed direct access to streams. A flume study was conducted to quantify the effect and understand the transport of E. coli from directly deposited cattle manure. Five steady‐state flows, ranging from 0.00683 to 0.0176 m³/s, were studied and loads from a single cowpie exceeded the U.S. Environmental Protection Agency’s recommended water‐quality standards (235 CFU/100 ml) at each flow over the hour study period. Average E. coli concentrations ranged from 10² to 10⁵ CFU/100 ml over the hour sampling period for all flows. High spatial variations in E. coli concentrations were often seen at each sampling time, with higher concentrations typically at the bottom of the flume. E. coli resuspension was initially greater at 0.5 min after deposition, for the lowest flow (10⁵ CFU/m²/s); however, resuspension rates became similar over time, on the order of 10³ CFU/m²/s. This study demonstrates that the concentrations of E. coli can vary over the water column, and therefore grab samples may inaccurately measure bacteria concentrations and loads in streams. In addition, resuspension rates were often high, so the incorporation of this process into water‐quality models is important for bacteria prediction.     

The Myth of Efficiency: Technology and Ethics in Industrial Food Production

In this paper, we explore how the application of technological tools has reshaped food production systems in ways that foster large-scale outbreaks of foodborne illness. Outbreaks of foodborne illness have received increasing attention in recent years, resulting in a growing awareness of the negative impacts associated with industrial food production. These trends indicate a need to examine systemic causes of outbreaks and how they are being addressed. In this paper, we analyze outbreaks linked to ground beef and salad greens. These case studies are informed by personal interviews, site visits, and an extensive review of government documents and peer-reviewed literature. To explore these cases, we draw from actor-network theory and political economy to analyze the relationships between technological tools, the design of industrial production systems, and the emergence and spread of pathogenic bacteria. We also examine if current responses to outbreaks represent reflexive change. Lastly, we use the myth of Prometheus to discuss ethical issues regarding the use of technology in food production. Our findings indicate that current tools and systems were designed with a narrow focus on economic efficiency, while overlooking relationships with pathogenic bacteria and negative social impacts. In addition, we find that current responses to outbreaks do not represent reflexive change and a continued reliance on technological fixes to systemic problems may result in greater problems in the future. We argue that much can be learned from the myth of Prometheus. In particular, justice and reverence need to play a more significant role in guiding production decisions.     

An integrated approach to the toxicity assessment of Irish marine sediments: validation of established marine bioassays for the monitoring of Irish marine sediments

This paper describes the ecotoxicological evaluation of marine sediments from three sites around Ireland representative of a range of contaminant burdens. A comprehensive assessment of potential sediment toxicity requires the consideration of multiple exposure phases. In addition to the evaluation of multi-exposure phases the use of a battery of multi-trophic test species has been advocated by a number of researchers as testing of single or few organisms may not detect toxicants with a specific mode of action. The Microtox(R) solid phase test (SPT) and the 10-d acute amphipod test with Corophium volutator were used to assess whole sediment toxicity. Porewater and elutriates were assessed with the Microtox(R) acute test, the marine prasinophyte Tetraselmis suecica, and the marine copepod Tisbe battagliai. Solvent extracts were assayed with the Microtox(R) and T. battagliai acute tests. Alexandra Basin was identified as the most toxic site according to all tests, except the Microtox(R) SPT which identified the Dunmore East site as being more toxic. However, it was not possible to correlate the observed ecotoxicological effects with a specific and/or class of contaminants based on sediment chemistry alone. Therefore porewaters found to elicit significant toxicity (Dunmore East and Alexandra Basin) with the test battery were selected for further TIE assessment with T. battalgiai and the Microtox(R) system. The results of this study have important implications for risk assessment in estuarine and coastal waters in Ireland, where, at present the monitoring of sediment and water quality is predominantly reliant on chemical analysis alone.     

Evaluating the power of surface attendance counts to detect long-term trends in populations of crevice-nesting auklets

This study assessed metals in water and different tissues of Labeo rohita and the impact of these metals on DNA and proteins as biomarkers of gills and muscles of these fish from three different polluted sites (reference or low = KW, medium = CH and high = SK) of the Indus River, Pakistan. The Mn, Pb, Cu, Zn, Hg, and Cr levels in water, gills, liver, muscles, and skin of these fish were compared with the international permissible levels. All metals except Pb and Hg in water were within the acceptable limits of drinking water. In contrast, the Mn, Hg, and Cr levels in the fish tissues were higher than their permissible limits for fish as a human food. Here, the gills contained higher metals than the other tissues. Different patterns of biomarkers were found in fish from these sites. While the gills did not show four protein bands (55, 30, 18.4, and 16.4 kDa), the muscles showed four new protein bands (100, 85, 45, and 20 kDa) for fish from the medium and high polluted sites as compared to the reference or low polluted site. The fish from the CH and SK sites of the Indus River contained low molecular weight DNA in their gills but high molecular weight DNA in their muscles when compared with the KW site. This study suggests that the proteins and DNA profiles of L. rohita could be used as biomarkers to assess the impact of potential environmental stressors such as metals on the freshwater systems.     

Are rivers just big streams? A pulse method to quantify nitrogen demand in a large river

Given recent focus on large rivers as conduits for excess nutrients to coastal zones, their role in processing and retaining nutrients has been overlooked and understudied. Empirical measurements of nutrient uptake in large rivers are lacking, despite a substantial body of knowledge on nutrient transport and removal in smaller streams. Researchers interested in nutrient transport by rivers (discharge >10000 L/s) are left to extrapolate riverine nutrient demand using a modeling framework or a mass balance approach. To begin to fill this knowledge gap, we present data using a pulse method to measure inorganic nitrogen. (N) transport and removal in the Upper Snake River, Wyoming, USA (seventh order, discharge 12000 L/s). We found that the Upper Snake had surprisingly high biotic demand relative to smaller streams in the same river network for both ammonium (NH4+) and nitrate (NO3-). Placed in the context of a meta-analysis of previously published nutrient uptake studies, these data suggest that large rivers may have similar biotic demand for N as smaller tributaries. We also found that demand for different forms of inorganic N (NH4+ vs. NO3-) scaled differently with stream size. Data from rivers like the Upper Snake and larger are essential for effective water quality management at the scale of river networks. Empirical measurements of solute dynamics in large rivers are needed to understand the role of whole river networks (as opposed to stream reaches) in patterns of nutrient export at regional and continental scales.     

Use of physical properties to predict the effects of tillage practices on organic matter dynamics in three Illinois soils

This work builds on a previous study of long-term tillage trials that found use of no-tillage (NT) practices increased soil organic carbon (SOC) sequestration at Monmouth, IL (silt loam soil) by increasing the soil's protective capacity, but did not alter SOC storage in DeKalb, IL (silty clay loam), where higher clay contents provided a protective capacity not affected by tillage. The least limiting water range (LLWR), a multi-factor index of structural quality, predicted observed soil CO2 efflux patterns. Here we consider whether LLWR can predict sequestration trends at a third site, Perry, IL (silt loam soil) where SOC content is lower and bulk density is higher than in previously considered sites, and determine whether pore size characteristics can help explain the influence use of NT practices has had on SOC sequestration at all three locations. At Perry, LLWR was again related with differences in specific soil organic carbon mineralization rates (RESPsp) (2000-2001). Reduced RESPsp rates explain increases in SOC storage under NT management observed only after 17 yr. Trends in RESPsp suggest use of NT practices only enhance physical protection of SOC where soil bulk density is relatively high (approximately 1.4 g cm(-3)). In those soils (Monmouth and Perry), use of NT management reduced the volume of small macropores (15-150 microm) thought to be important for microbial activity. Physical properties appear to determine whether or not use of NT practices will enhance C storage by increasing physical protection of SOC. By refining the functions used to compute the LLWR and our understanding of the interactions between management, pore structure, and SOC mineralization, we should be able to predict the influence of tillage practices on SOC sequestration.