Population structure and historical demography of the thorny skate (<Emphasis Type="Italic">Amblyraja radiata</Emphasis>, Rajidae) in the North Atlantic

Population genetic structure of the thorny skate (Amblyraja radiata) was surveyed in >300 individuals sampled from Newfoundland, Iceland, Norway, the Kattegat and the central North Sea. A 290-bp fragment of the mt cytochrome-b gene was first screened by SSCP. Sequences of SSCP haplotypes revealed 34 haplotypes, 14 of which were unique to Iceland, 3 to Newfoundland, 1 to Norway and 3 to the Kattegat. The global F _ST was weak but significant. Removal of the two Kattegat locations, which were the most differentiated, resulted in no significant genetic differentiation. Haplotype diversity was high and evenly distributed across the entire Atlantic (h = 0.8) with the exception of the North Sea (h = 0.48). Statistical parsimony revealed a star-like genealogy with a central widespread haplotype. A subsequent nested clade analysis led to the inference of contiguous expansion with evidence for long distance dispersal between Newfoundland and Iceland. Historical demographic analysis showed that thorny skates have undergone exponential population expansion that started between 1.1 million and 690,000 years ago; and that the Last Glacial Maximum apparently had little effect. These results strongly differ from those of a parallel study of the thornback ray (Raja clavata) in which clear structure and former refugial areas could be identified. Although both species have similar life history traits and overlapping ranges, the continental shelf edge apparently does not present a barrier to migration in A. radiata, as it does for R. clavata.     

RAPD扩增中商品酶体系对扩增产物的影响

随机选用了10条RAPD引物，采用3种商品TapDNA聚合酶体系，以5个不同物种的动植物总DNA为模板，进行RAPD扩增，实验发现，在对同一模板、采用同一引物进行的RAPD扩增中，仅仅因为使用了不同的商品TaqDNA聚合酶，获得的扩增产物差别极大；不同商品来源的PCR反应缓冲体系，对扩增产物也有一定影响，但相对较小，这说明，不同的商品酶体系对RAPD扩增产物影响很大，因此，影响RAPD扩增产物稳定性的一个关键因素是商品TaqDNA聚合酶本身；研究中前后一致地使用同一商品TaqDNA聚合酶体系，是成功进行RAPD分析的基础。     

用改良彗星试验检测工业废水的DNA损伤作用

采用改良彗星试验直接检测了多种工业废水不所引起的Ｖ７９细胞ＤＮＡ损伤。结果表明,所测的种各工业废话水均含有ＤＮＡ损伤剂,能够诱发培养的Ｖ７９细胞ＤＮＡ链断裂,其中以制革厂不的ＤＮＡ损伤作用最强。本研究显示出改良彗星试验在综合评价各种废水遗传毒性方面具有广阔的应用前景。     

职业接触苯乙烯工人静脉血中蛋白质环氧苯乙烯加合物的分析测定

静脉血中蛋白质－环氧苯乙烯（ＳＯ）加合物的分析测定是将蛋白质中半胱氨酸残留经分解后，用Ｒａｎｅｙ Ｎｉ催化反应生成两种加合物：α－苯己醇，β－苯已醇，再用五氟苯氯衍生，ＧＣ／ＭＳ测定，用同样的方法测ＳＤ大鼠血的蛋白质加合物，结果表明动物血中蛋白质加的与实验的苯乙烯或ＳＯ剂量有较好的相关性；而且ＳＯ与半胱氨酸的反应α位强于β位，在人群实验中，对一个石棉厂职业接触苯乙烯工人静脉血中的蛋白质加合物进行测     

分层型水库藻类垂向演替的水质与细菌种群调控

浮游藻类和细菌是水生食物网的重要组成部分,在水源水库生态系统物质循环和能量流动方面发挥关键作用,藻类的空间演替与水体细菌种群代谢和结构演变关系密切.因此,本文以李家河水库为研究对象,在分析水库水质指标基础上,采用高通量DNA测序技术和Biolog技术,研究水库藻类暴发期,浮游藻类和细菌群落结构垂向演替特征及其与水质的偶联关系.结果表明,李家河水库在8月处于热分层期,水体pH、DO和NH~+_4-N随深度变化均逐渐降低(P0.001).藻密度和Chla呈现同步变化趋势(P0.001),表层最大分别为3 364.33×10~4 cells·L~(-1)和7.03μg·L~(-1).藻类群落结构在水深0 m和3 m处以微囊藻为主,而在水深6 m处,小环藻取代微囊藻成为最优藻属,相对丰度达57.28%.Biolog结果表明,微囊藻的暴发对细菌代谢活性及其相对丰度产生较大影响,但细菌种群代谢活性多样性变化不显著.高通量测序共发现1 420个OTUs,隶属于10个细菌门类,其中放线菌门(Actinobacteria)和变形菌门(Proteobacteria)在不同水层均为最优门类,其相对丰度之和达50%以上;绿菌门(Chlorobi)和浮霉菌门(Planctomycetes)的相对丰度随着水深增加发生显著变化,均在6 m深度达到最大值,分别为10.29%和6.78%,且与水层藻密度呈显著负相关(P0.05);厚壁菌门(Firmicutes)和芽单胞菌门(Gemmatimonadetes)与藻密度呈显著正相关(P0.05).热图(Heat map)指纹图谱表明,李家河水库的细菌群落结构垂向分布差异显著,且随着水深的增加,细菌群落分布更均匀并趋于多样性.冗余分析(RDA)表明,细菌和藻类的群落结构的垂向分布受不同水质指标调控且差异显著.对水源水库藻类暴发期藻类与细菌群落的偶联机制进行探究,为水源藻华消涨的分子微生态驱动机制研究提供科学依据.     

大亚湾浮游细菌的变性梯度凝胶电泳分析

于2010年12月以及2011年6月采集了大亚湾9个站点的表层水样,利用PCR-变性梯度凝胶电泳(PCR-DGGE)技术对浮游细菌DNA指纹进行了分析.结果显示,大亚湾海域浮游细菌DNA指纹比较丰富,冬季和夏季样品中分别共得到32条和33条条带,每个样品得到的条带数为18~25条.DNA指纹的Shannon-Weaver多样性指数(H')和Pielou均匀度(J)的变化范围分别为2.48~2.88和0.80~0.93.DNA指纹条带数与温度和盐度明显正相关,而与p H、DO、透明度呈明显负相关关系.结果说明PCR-DGGE技术可以在一定程度上反映细菌的群落结构和多样性,但需要与其他技术相结合方能较全面反映细菌的结构与功能.     

Genotoxicity of ferric oxide nanoparticles in Raphanus sativus: Deciphering the role of signaling factors, oxidative stress and cell death

We have studied the genotoxic and apoptotic potential of ferric oxide nanoparticles(Fe_2O_3-NPs) in Raphanus sativus(radish).Fe_2O_3-NPs retarded the root length and seed germination in radish.Ultrathin sections of treated roots showed subcellular localization of Fe_2O_3-NPs,along with the appearance of damaged mitochondria and excessive vacuolization.Flow cytometric analysis of Fe_2O_3-NPs(1.0 mg/m L) treated groups exhibited 219.5%,161%,120.4% and 161.4% increase in intracellular reactive oxygen species(ROS),mitochondrial membrane potential(ΔΨm),nitric oxide(NO) and Ca2+influx in radish protoplasts.A concentration dependent increase in the antioxidative enzymes glutathione(GSH),catalase(CAT),superoxide dismutase(SOD) and lipid peroxidation(LPO) has been recorded.Comet assay showed a concentration dependent increase in deoxyribonucleic acid(DNA) strand breaks in Fe_2O_3-NPs treated groups.Cell cycle analysis revealed 88.4% of cells in sub-G1 apoptotic phase,suggesting cell death in Fe_2O_3-NPs(2.0 mg/m L) treated group.Taking together,the genotoxicity induced by Fe_2O_3-NPs highlights the importance of environmental risk associated with improper disposal of nanoparticles(NPs) and radish can serve as a good indicator for measuring the phytotoxicity of NPs grown in NP-polluted environment.     

光谱法研究甲萘威与DNA的相互作用

通过紫外与荧光光谱法研究了甲萘威与DNA的相互作用．结果显示,在甲萘威的作用下,DNA的吸收光谱出现增色与红移现象;DNA能够引起甲萘威单一的静态猝灭;甲萘威与DNA的作用能减弱K4[Fe(CN)6)]对甲萘威的荧光猝灭;实验结果支持甲萘威能以嵌插方式与DNA形成加合物,氯化钠及乙醇对加合物的荧光光谱存在不同影响．加合物的形成与药物的生物活性之间存在一定的相互联系。     

Frequency and timing of extrapair fertilisation in the polyandrous red phalarope (Phalaropus fulicarius)

In sequentially polyandrous bird species, where females mate with different males in succession during a single breeding season, sperm stored by females can occasionally lead to extrapair fertilisations (EPFs) in clutches cared for by the second and subsequent males. Thus, we predicted that in red phalaropes (Phalaropus fulicarius) – a sex-role-reversed, sequentially polyandrous, arctic breeding shorebird – EPFs would occur more frequently in clutches laid later in the breeding season. We used multilocus DNA profiling to examine the frequency and timing of EPFs in a population of red phalaropes breeding in the Canadian high arctic. Using a technique to determine parentage without maternal DNA, we inferred that 6 of 70 chicks in 18 broods resulted from EPFs – one extrapair chick in each of 6 broods. These results were supported by a further analysis using microsatellite DNA. As predicted, broods containing EPFs hatched from clutches laid significantly later in the season than did broods containing no EPFs. The difference in median hatch dates between broods with and without EPFs was 9.0 days, or 38% of the entire egg-laying period in that season. For the whole breeding season, we estimated that 6.5% of chicks were sired by extrapair males, which is similar to extrapair paternity estimates for other sex-role-reversed birds, but relatively low compared to the majority of socially monogamous species studied so far. Received: 24 August 1998 / Received in revised form: 18 January 1999 / Accepted: 24 January 1999     

Determinants of male mating success in the red bishop (Euplectes orix)

We studied sexual selection in the red bishop, Euplectes orix, a colonial, polygynous weaverbird widely distributed over sub-Saharan Africa. Male reproductive success measured in terms of the number of nests accepted by females and the number of eggs and nestlings in all the nests on a male's territory varied considerably. The standardized variance (variance/mean²) in male reproductive success ranged from 0.505 to 1.737 in different years, indicating a high potential for sexual selection in this species. An analysis of genetic parentage for 432 nestlings by non-radioactive, multilocus DNA fingerprinting confirmed that male reproductive success (number of young sired on the territory) in this species can be reliably estimated by the measures introduced above. In all 4 study years there was a strong positive correlation between male mating success and the total number of nests that males built in their territories. The number of nests built can be partitioned into the number of weeks a male held a territory and his nest-building performance. Both factors exert a significant positive effect on male mating success and in combination explained between 53.3 and 86.3% of the variation in male reproductive success. Male morphological characters were found to be of no importance. Males that established a territory in the following season built more nests and held their territories for longer than males that did not establish a territory in the following season, suggesting that these measures might be indicators of male condition and quality. Male nest-building performance (number of nests built per week) seems to be unrelated to male condition or quality. Received: 8 January 1999 / Received in revised form: 7 June 1999 / Accepted: 13 June 1999