Spatial and seasonal variations in bacterial communities of the Yellow Sea by T-RFLP analysis

Four typical coastal sites (rocky shore, sandy shore, mud flat shore, and artificial harbor) at the Yellow Sea were chosen to investigate the spatial and seasonal variations in bacterial communities. This was accomplished by using terminal restriction fragment length polymorphism (T-RFLP) analysis of PCR amplified 16S rDNA fragments. Two kinds of tetrameric restriction enzymes, HhaI and MspI, were used in the experiment to depict the bacterial community diversity in different marine environments. It was found that the community compositions digested by the two enzymes separately were different. However, the results of bacterial community diversity derived from them were similar. The MDA analysis results of T-RFLP profiles coming from HhaI and MspI both exhibited a significant seasonal community shift for bacteria and a relatively low spatial variation among the four locations. With HhaI as the sample, the pair wise T-tests also revealed that variations were minor between each pair of marine environments, with R ranging from 0.198 to 0.349. However, the bacterial community structure in the mud flat site depicted a larger difference than each of the other three sites (R ranging from 0.282 to 0.349).     

多氯代二苯并-对-二噁的微生物降解

从多氯代二苯并-对-二噁(PCDDs)污染的土壤和含氧沉积物中分离筛选出8株降解PCDDs的菌株,均能以一氯代和二氯代二为单一碳源和能源生长并使其降解,多数几乎不能降解三氯代二噁.但是,用邻二氯苯作为初级营养共代谢物,可以增强菌株对较高氯代二噁(如三氯代和四氯代二噁)的降解能力.利用所筛选菌株中的1株,经鉴定为假单胞菌EE41(Pseudomonas sp.EE41).降解试验结果表明,1,2,3-TrCDD在浓度为1.2mg/L时3周内可降解33%,2,3,7,8-TCDD在0.1 mg/L时3周内最多可降解37.8%.试验的高氯代二噁(pCDD,H6-CDD,H7-CDD和OCDD)则只被菌体强烈吸收并积累,却不能被降解.     

采用温度梯度凝胶电泳(TGGE)分析消毒剂对池塘型微宇宙细菌群落结构的影响

构建6个池塘型微宇宙模拟水生态系统,1个设为对照组,试验组连续投加次氯酸钠13 d,投加剂量分别为1.0、2.5、5.0、10.0、20.0 mg/L,停止投加后再观察10 d.试验期间对各微宇宙分别进行8次采样,经37 ℃培养后提取细菌总DNA,进行16S rDNA V3区扩增后,对扩增产物进行TGGE分析.对TGGE图谱中的主要条带进行回收、重新扩增、克隆、建库、测序以及序列分析.结果显示,消毒剂进入环境后会对细菌群落结构产生影响,但不同剂量消毒剂产生的影响有显著差异,存在明显的剂量-效应关系:低剂量消毒剂对细菌群落结构的影响比较小,而且是可逆的,微宇宙系统对消毒剂逐渐适应后其群落结构即可恢复;而高剂最消毒剂对细菌群落结构的破坏比较大,且不可逆转,即使消毒剂停止投加后也不能恢复.说明盲目的过量投加消毒剂会对水体微生态环境造成严重破坏.图4表1参10     

二甲戊乐灵降解细菌的分离及降解特性

分离鉴定了二甲戊乐灵降解细菌 ,并研究了培养条件对二甲戊乐灵降解和细菌生长的影响 .结果表明 ,所分离的29株细菌中有3株在3d内对100mg·L^-1二甲戊乐灵的降解率在80%以上 ,选择HB-1、WB-12株细菌进一步研究 ,此2株细菌经鉴定分别属于假单胞菌(Pseudomonas)和玫瑰色微球菌(Mirococcusluteus) .结果表明 2株细菌在中性培养液中外加碳源浓度为0.2%、二甲戊乐灵浓度不大于100mg·L^-1、30～40℃培养的条件下 ,细菌生长量和二甲戊乐灵的降解率都达到最大.     

强化启动对内循环生物流化床硝化效果的影响

通过改变内循环生物流化床的启动水质,提高N/C组成以强化流化床后期的硝化作用.结果表明,高N/C和低进水COD强化启动后处理生活污水,在HRT为2h时,可以同时高效去除COD和氨氮,氨氮的平均去除率为74%.耗氧速率试验表明,强化启动后,流化床中生物膜的异养菌活性大幅度降低,氨氧化细菌活性明显提高,硝化细菌活性变化不大.对反应系统微生物醌进行的跟踪分析表明,强化启动后,生物膜中的硝化细菌数量明显增加,微生物种群的分布均匀性变化较小,以革兰氏阴性菌为主.扫描电镜观察显示,低N/C启动条件下,生物膜厚且致密,异养菌所占比例高;高N/C启动条件有利于硝化细菌的生长,生物膜相对稀薄.     

高效水解酸化UASB活性污泥的菌群结构分析

采用454高通量测序技术对低能耗、低污泥产量且具有脱氮效能的印染废水处理工艺中UASB污泥的微生物菌群结构进行了分析.结果表明,UASB内污泥的微生物菌种呈多样性分布且优势菌群突出,通过菌群鉴定发现,脱硫橄榄样菌属(Desulfobacula)、Levilinea、长绳菌属(Longilinea)、Candidatus Tammella、Paludibacter、索氏菌属(Thauera)、Tepidimicrobium、杆状脱硫菌属(Desulforhabdus)、类芽孢杆菌属(Paenibacillus)、梭菌属(Clostridium)是主要的优势菌属.其中,梭菌属是起到产酸和污泥减量作用的主要菌种.另外,具有脱氮效能的原因可能是由于发生了硫酸盐型厌氧氨氧化作用.通过Shannon、Chao、Simpson、Shannon指数的计算,发现该UASB中微生物较其他废水处理系统,群落结构拥有较高的多样性和丰度,有利于稳定产酸.     

贵州喀斯特山区不同种植年限花椒根际土壤细菌群落结构特征研究

以贵州花江峡谷花椒(Zanthoxylum bungeamun)林为研究对象,采用16S rRNA高通量测序技术,分析种植5、10、20、30 a花椒根际土壤细菌群落结构和多样性特征,探讨不同种植年限花椒土壤理化因子对根际细菌群落分布的影响,为喀斯特石漠化地区花椒农业可持续发展提供有效的理论依据.结果表明,随着花椒种植...     

应用T-RFLP技术研究五氯酚对好氧颗粒污泥中细菌组成的影响

研究了五氯酚(PCP)对好氧颗粒污泥处理生活污水的影响,借助末端限制性酶切片段长度多态性(T-RFLP)技术考察了PCP存在时好氧颗粒污泥细菌组成的变化.结果表明,PCP对氨氮去除率的影响大于对COD去除率的影响,好氧颗粒污泥中微生物的种群数量随着PCP浓度的增加而逐渐减少,氨氮和COD去除率的变化与微生物种群数量变化相吻合.根据对PCP的敏感程度,好氧颗粒污泥中的微生物可分以下几类:①对PCP高度敏感的微生物,可能是Microbacterium或Streptococcus等以及2种未被报道的菌种;②对PCP中度敏感的微生物,可能是Corynebacterium或Nevskia等以及1种未被报道的菌种;③对PCP低度敏感的微生物,可能是Mycoplasma或Exiguobacterium等以及1种未被报道的菌种;④对PCP耐受性强的微生物,这类微生物主要是13个末端限制性片段(69、71、82、175、198、241、229、232、233、240、245、269、449bp)所代表的微生物,PCP浓度为30mg/L时,长度为82bp和175bp的片段的相对面积分别22.7%和13%,所代表的微生物已经演替为优势菌群.     

Determination of microbiological contamination,antibacterial and antioxidant activities of natural plant hazelnut (Corylus avellana L.) pollen

The aim of our study is to determine microbial contamination, antibacterial and antioxidant activities of 14 pollen samples of Corylus avellana collected from different locations in Slovakia. Microbiological analysis was carried out in two steps: microbiological assays and studies of antibacterial activity of pollen extracts. The antimicrobial properties of pollen extracts were carried out with the disc-diffusion method. Methanol (70%), ethanol (70%) and distilled water were used for pollen extracts. Five strains of bacteria such as gram-negative (Salmonella enterica subsp. enterica CCM 3807, Escherichia coli CCM 2024, and Yersinia enterocolitica CCM 5671) and gram-positive (Staphylococcus aureus CCM 2461 and Bacillus thuringiensis CCM 19T) were tested. Antioxidant activity of pollen extracts was determined by the DPPH method. Bacterial analysis includes the determination of the total bacterial count ranged from 4.08 to 4.61 log CFU g^?1, mesophilic aerobic bacteria ranged from 3.40 to 4.89 log CFU g^?1, mesophilic anaerobic bacteria ranged from 3.20 to 4.52 log CFU g^?1, coliform bacteria ranged from 3.30 to 4.55 log CFU g^?1, yeasts and filamentous fungi ranged from 3.00 to 3.56 log CFU g^?1. Microscopic filamentous fungi Aspergillus spp., Alternaria spp., Penicillium spp., Cladosporium spp., Rhizopus spp., and Paecylomyces spp. were isolated from hazelnut pollen. Yersinia enterocolitica was the most sensitive strain among ethanolic and methanolic pollen hazelnut extracts. Staphylococcus aureus was the most sensitive strain against aqueous hazelnut pollen extracts. We determined the following sensitivity against ethanol pollen extracts respectively: Yersinia enterocolitica?>?Salmonella enterica?>?Staphylococcus aureus?>?Bacillus thuringiensis?>?Escherichia coli. Methanol pollen extracts had shown following sensitivity: Yersinia enterocolitica?>?Salmonella enterica?>?Escherichia coli?>?Staphylococcus aureus?>?Bacillus thuringiensis. Aqueous extracts had shown the following sensitivity: Staphylococcus aureus?>?Salmonella enterica?>?Escherichia coli?>?Bacillus thuringiensis?>?Yersinia enterocolitica. Hazelnut pollen extracts have over 82% antioxidant capacity in samples from non-urban zones. An elevated level of antioxidant potential in the pollen is determined by its biological properties conditioned by biologically active substances. DPPH method allowed characterizing pollen as a source of antioxidants.     

基于高通量测序的工业园区地下水和土壤细菌群落结构比较研究

为探究工业园区地下水和土壤细菌群落结构、多样性变化特征,采用高通量测序技术对地下水和土壤细菌16S r RNA基因高变区域进行序列测定。通过对Alpha多样性、物种组成、丰度和群落结构的分析,比较地下水和土壤细菌群落结构的异同。Alpha多样性的比较结果表明,土壤细菌群落多样性和丰富度明显高于地下水,地下水细菌群落多样性指数反映出地下水已受到周边污染源的影响。物种注释结果表明,地下水样品共检出48个细菌门,土壤样品共检出50个细菌门。变形菌门(Proteobacteria)、拟杆菌门(Bacteroidetes)和厚壁菌门(Firmicutes)是地下水细菌群落的优势类群,共占93.54%,且该工业园区地下水细菌群落呈现出典型的淡水种群特征;土壤中优势细菌门为Proteobacteria、放线菌门(Actinobacteria)、酸杆菌门(Acidobacteria)、Firmicutes和芽单胞菌门(Gemmatimonadetes),共占85.21%。由于地下水和土壤两者的生态系统和理化环境的差异,致使Actinobacteria、Acidobacteria、绿弯菌门(Chloroflexi)、硝化螺旋菌门(Nitrospirae)、α-变形菌纲(Alphaproteobacteria)、δ-变形菌纲(Deltaproteobacteria)和Gemmatimonadetes占比在地下水和土壤细菌群落间差异显著,同时使地下水和土壤细菌群落各含有一些特有的优势细菌属(地下水2个,土壤4个)。基于高通量测序技术对工业园区样品的测序结果可以为地下水和土壤环境的生态评价提供方法依据。