Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats

Conservation and management of marine biodiversity depends on biomonitoring of marine habitats, but current approaches are resource-intensive and require different approaches for different organisms. Environmental DNA (eDNA) extracted from water samples is an efficient and versatile approach to detecting aquatic animals. In the ocean, eDNA composition reflects local fauna at fine spatial scales, but little is known about the effectiveness of eDNA-based monitoring of marine communities at larger scales. We investigated the potential of eDNA to characterize and distinguish marine communities at large spatial scales by comparing vertebrate species composition among marine habitats in Qatar, the Arabian Gulf (also known as the Persian Gulf), based on eDNA metabarcoding of seawater samples. We conducted species accumulation analyses to estimate how much of the vertebrate diversity we detected. We obtained eDNA sequences from a diverse assemblage of marine vertebrates, spanning 191 taxa in 73 families. These included rare and endangered species and covered 36% of the bony fish genera previously recorded in the Gulf. Sites of similar habitat type were also similar in eDNA composition. The species accumulation analyses showed that the number of sample replicates was insufficient for some sampling sites but suggested that a few hundred eDNA samples could potentially capture >90% of the marine vertebrate diversity in the study area. Our results confirm that seawater samples contain habitat-characteristic molecular signatures and that eDNA monitoring can efficiently cover vertebrate diversity at scales relevant to national and regional conservation and management.     

洪泛区林地的开发对鱼类栖息地面积的影响模拟

洪泛区的开发利用,必然会导致洪泛区林地糙率的改变。河漫滩也是河流洪泛区的一部分。洪泛区糙率的减小,会使河水流速增大,从而减小鱼类可用栖息地面积。因此,在洪水发生时,为了给鱼类提供避险场所,保护有效栖息地面积,需研究洪泛区林地的开发对鱼类的影响。利用River 2D软件模拟在一定频率的洪水条件下,不同的河漫滩糙率对应的鱼类栖息地加权可用面积(WUA),分析了糙率的改变对河流鱼类栖息地的影响。结果表明:随着河漫滩糙率的降低,加权可用面积(WUA)逐渐减小,河漫滩范围内WUA的变化幅度比较大,河漫滩的特性对鱼类栖息地面积的影响很大。洪泛区植被的砍伐,会使鱼类栖息地面积减小。因此,应防止洪泛区的过度开发,保护河流生态环境。     

Effects of land use,cover, and protection on stream and riparian ecosystem services and biodiversity

Protected areas are an important part of broader landscapes that are often used to preserve biodiversity or natural features. Some argue that protected areas may also help ensure provision of ecosystem services. However, the effect of protection on ecosystem services and whether protection affects the provision of ecosystem services is known only for a few services in a few types of landscapes. We sought to fill this gap by investigating the effect of watershed protection status and land use and land cover on biodiversity and the provision of ecosystem services. We compared the ecosystem services provided in and around streams in 4 watershed types: International Union for Conservation of Nature category II protected forests, unprotected forests, unprotected forests with recent timber harvesting, and unprotected areas with agriculture. We surveyed 28 streams distributed across these watershed types in Quebec, Canada, to quantify provisioning of clean water, carbon storage, recreation, wild foods, habitat quality, and terrestrial and aquatic biodiversity richness and abundance. The quantity and quality of ecosystem services and biodiversity were generally higher in sites with intact forest—whether protected or not—relative to those embedded in production landscapes with forestry or agriculture. Clean-water provision, carbon storage, habitat quality, and tree diversity were significantly higher in and around streams surrounded by forest. Recreation, wild foods, and aquatic biodiversity did not vary among watershed types. Although some services can be provided by both protected and unprotected areas, protection status may help secure the continued supply of services sensitive to changes in land use or land cover. Our findings provide needed information about the ecosystem service and biodiversity trade-offs and synergies that result from developing a watershed or from protecting it.     

利用脂肪酶提高鱼油中多不饱和脂肪酸(PUFAs)甘油酯

利用脂肪酶选择性的水解作用研究提高鱼油中多不饱和脂肪酸(PUFAs)甘油酯的含量.通过对5种不同来源脂肪酶的筛选,以来源于米曲霉脂肪酶为最佳酶种;同时研究该酶水解鱼油的最佳工艺条件:反应温度、加酶量、反应转速、添加剂影响;最后确定最佳的富集PUFAs甘油酯时间.在此工艺条件下,鱼油中EPA由3.0%提高到9.0%,DHA由4.3%提高到16.5%,EPA DHA由7.3%提高到25.5%.图3表1参8     

丘陵地区农牧渔生态系统的研究

经四年研究，本文提出了适宜丘陵地区的作物－猪－鱼复合生态系统模型。在该系统中，淡水鱼的养殖以半精养方式最佳。本文还讨论了半精养方式的混养结构、水质管理和饵料组合等配套技术。     

珠江三角洲淡水养殖沉积物及鱼体中DDTs和PAHs的残留与风险分析

采用GC-ECD和GC-MS分析了珠江三角洲淡水养殖鱼塘沉积物及鱼体中DDTs、PAHs的质量分数。结果表明,珠江三角洲地区鱼塘积物中DDTs质量分数范围为2.87～8.25ng·g-1,PAHs质量分数分布在61.76～196.05ng·g-1(干物质量)之间;鳙鱼、草鱼等5种鱼肌肉样品中DDTs质量分数为5.47～125.27ng·g-(1湿质量),PAHs质量分数为30.94～410.06ng·g-1(湿质量),5个品种鱼体内DDTs质量分数均未超过国家食用卫生标准。部分鱼塘中含有o,p’-DDT和p,p'-DDT,表明近期曾受到DDT污染。生态风险分析表明,珠江三角洲部分地区DDTs污染生态风险较高。     

Comparison of Zn, Cu, Pb, Ni, Cr, Sn, Mo Concentrations in Tissues of Fish (Roach and Perch) from Lake Baikal and Bratsk reservoir, Russia

Data on Zn, Cu, Pb, Ni, Cr, Sn, Mo concentrations in some food fish in Baikal Lake and Bratsk reservoir have been compared. The muscles, skin and gills of roach and perch (Rutilus rutilus and Perca fluviatis L.) were analysed. The conditions of atomic-emission analysis, detection limits, reproducibility, coefficients of transformation from the wet to dry mass and to an ash residue are reported. To verify accuracy, the results of reference samples OK-1 (Baikal perch) and OM-1 (Baikal roach) were used along with atomic-absorption and neutron-activation results of ashed and dried samples. The observed range of concentrations in tissues exceeds the probable analytical errors and reflects natural variability. The content of Zn, Cu, Pb, Ni and Cr in tissues of fish collected in the Bratsk reservoir from the conventionally uncontaminated and polluted sites correspond to the concentrations in tissues of similar fish from Lake Baikal. The latter are normal for fish of weakly mineralised oligotrophic reservoirs. The ranges of concentration in studied fish (roach and perch) consist of mg kg^–1 dry wt: in muscles-Zn(14–28), Cu(2.2–4.7), Pb(0.30–0.61); in skin-Zn(94–119), Cu(1.2–1.4), Pb(0.16–0.08); in gills-Zn(70–280), Cu(2.0–7.4), Pb(0.19–1.2).     

环境样品中非邻位取代共平面多氯联苯的测定

本文对测定实际环境样品中痕量非邻位取代共平面多氯联苯的方法进行了研究。样品萃取，净化后，经活性碳性层析分离，利用ＧＣ－ＥＣＤ毛细管柱双柱定性，外标法进行定量，测定了土壤和鱼肌肉中μｇ·ｋｇ＾－１数量级的３，３‘，４，４’－四氯联苯及ｎｇ·ｇｋｇ＾－１数量级的３，３‘，４’，５－五氯联苯。     

Conservation Benefits of Temperate Marine Protected Areas: Variation among Fish Species

Abstract:  Marine protected areas, and other fishery management systems that impart partial or total protection from fishing, are increasingly advocated as an essential management tool to ensure the sustainable use of marine resources. Beneficial effects for fish species are well documented for tropical and reef systems, but the effects of marine protected areas remain largely untested in temperate waters. We compared trends in sport-fishing catches of nine fish species in an area influenced by a large (500-km²) towed-fishing-gear restriction zone and in adjacent areas under conventional fishery management controls. Over the period 1973–2002 the mean reported weight of above-average-sized (trophy) fish of species with early age at maturity and limited home range was greatest within the area influenced by the fishing-gear restriction zone. The reported weight of trophy fish of species that mature early also declined less and more slowly over time within the area influenced by the fishing-gear restriction zone. Importantly, the mean reported weight of trophy fish of species that mature late and those that undertake extensive spatial movements declined at the same rate in all areas. Hence these species are likely to require protected areas >500 km² for effective protection. Our results also indicated that fish species with a localized distribution or high site fidelity may require additional protection from sport fishing to prevent declines in the number or size of fish within the local population.     

Social stimulation,nuptial colouration,androgens and immunocompetence in a sexual dimorphic cichlid fish

The nature of the costs maintaining honesty of sexual signalling in inter- and intrasexual interactions remains a contentious issue. For carotenoid-based colour ornaments, it has been hypothesized that the honesty of the signal is enforced when carotenoid allocation to colour expression is traded off against carotenoid availability for immunocompetence. In addition, honesty is enforced if androgens required for colour expression are immunosuppressive. We tested whether there is a trade-off between colour expression and immunocompetence in a lek-breeding haplochromine cichlid fish, Pundamilia nyererei, from Lake Victoria with a carotenoid-based nuptial dress. First, we showed that expression of red nuptial colouration and social rank in a group were positively correlated. We then successfully manipulated the level of colour advertisement by socially stimulating individually housed males with a rival male: Stimulated males developed larger areas of red nuptial colouration and had higher levels of circulating 11-ketotestosterone (11-KT) than non-stimulated males. We subsequently tested the humoral immune response to a novel antigen (sheep red blood cells). There was no overall significant effect of social stimulation on antibody production, but in the stimulated males, the degree of red colouration and the antibody response were negatively correlated. This significant interaction between colour and treatment thus shows that the negative correlation between colouration and antibody production is dependent on the (manipulated) social environment. This study provides correlational and experimental evidence for a trade-off between expression of a sexual trait and one component of immune function in fish. We found no evidence for a direct effect of 11-KT on antibody production, and we discuss alternative mechanisms that could mediate the trade-off.