Fungal degradation of an acetolactate synthase (ALS) inhibitor pyrazosulfuron-ethyl in soil

Owing to reported phytotoxicity of some sulfonylurea class of herbicides in number of sensitive crops and higher persistence in soil, present study was conducted to isolate and identify pyrazosulfuron-ethyl degrading fungi from soil of rice field. Penicillium chrysogenum and Aspergillus niger, were isolated and identified from rhizospere soil of rice field, as potent pyrazosulfuron-ethyl degrading fungi. Degradation of pyrazosulfuron-ethyl by P. chrysogenum and A. niger, yielded transformation products/metabolites which were identified and characterized by LC/MS/MS. The rate of dissipation of pyrazosulfuron-ethyl was found higher in soil of rice field and soil inoculated with P. chrysogenum. This showed important route of degradation of pyrazosulfuron-ethyl by microbes apart from chemical degradation.     

Comparison of in-house-developed ELISA with HPLC techniques for the analysis of atrazine residues

In-house developed ELISA was standardized to monitor atrazine residues in different environmental samples. The standard curve was linear, indicating an increase in log concentration with decrease in absorbance (%B/B(0)=1.075-0.042 Log C; r= -0.966). The middle of the test was at 75 ng/L and the lowest detection limit at 4 ng/L. ELISA significantly correlated with the high performance liquid chromatography (HPLC) (r=0.990). Internal validation showed good accuracy and precision. Maximum atrazine residues were present in Jehlum River water/sediments and maize/sugarcane plant roots. Most of the food samples were found to be contaminated. ELISA required less clean-up steps than HPLC, but showed matrix effect in soil/colored extracts.     

Effect of metal tolerant plant growth promoting Bradyrhizobium sp. (vigna) on growth, symbiosis, seed yield and metal uptake by greengram plants

The nickel and zinc tolerant plant growth promoting Bradyrhizobium sp. (vigna) RM8 was isolated from nodules of greengram, grown in metal contaminated Indian soils. The plant growth promoting (PGP) potentials of strain RM8 was assessed both in the presence and absence of nickel and zinc under in vitro conditions. Strain RM8 tolerated a high level of nickel (300 microg ml(-1)) and zinc (1400 microg ml(-1)) on yeast extract mannitol agar medium. Bradyrhizobium sp. (vigna) strain RM8 produced 13.3 microg ml(-1) of indole acetic acid in Luria Bertani broth at 100 microg ml(-1) of tryptophan which increased to 13.6 microg ml(-1) at 50 microg Ni ml(-1) and 13.5 microg ml(-1) at 300 microg Zn ml(-1). Strain RM8 was positive for siderophore, HCN and ammonia both in the absence and presence of nickel and zinc. The PGP activity of this strain was further evaluated with increasing concentrations of nickel and zinc using greengram as a test crop. The bioinoculant enhanced the nodule numbers by 82%, leghaemoglobin by 120%, seed yield by 34%, grain protein by 13%, root N by 41% and shoot N by 37% at 290 mg Ni kg(-1) soil. At 4890 mg Zn kg(-1) soil, the bioinoculant increased the nodule numbers by 50%, leghaemoglobin by 100%, seed yield by 36%, grain protein by 13%, root N by 47% and shoot N by 42%. The bioinoculant strain RM8 reduced the uptake of nickel and zinc by plant organs compared to plants grown in the absence of bioinoculant. This study suggested that the bioinoculant due to its intrinsic abilities of growth promotion and attenuation of the toxic effects of nickel and zinc could be exploited for remediation of metal from nickel and zinc contaminated sites.     

Determination of aflatoxin-B1 in poultry feed and its components employing enzyme-linked immunosorbent assay (ELISA)

A highly sensitive enzyme immunoassay was standardized for aflatoxin B₁ determination in poultry feed and its components using Riedel-de-Haen, ELISA Systems_. A microtitration plate method was optimized using anti-aflatoxin B₁ antibodies and peroxidase – aflatoxin B₁ conjugate, based on competitive enzyme immunoassay principle. Standards of concentrations of 5, 10, 20, 50, 100, 500?ng/L aflatoxin B₁, prepared in phosphate-buffered saline, were used. Standard curves showed that as the concentration of antigen decreased, absorbance values increased. Fifty percent inhibition was observed at 37?ng/L. Regression analysis showed that log concentration was inversely related to %B/B₀, with a highly significant negative correlation (?0.980). The lowest detection limit for aflatoxin B₁ was 5?ng/L. Using this standardized ELISA, aflatoxin B₁ was detected in most of the commercially available poultry feed samples and their components.

The data suggest that this test is suitable for the accurate determination of aflatoxin B₁ concentrations in poultry feed and its components.     

Role of plant growth promoting rhizobacteria in the remediation of metal contaminated soils

Pollution of the biosphere by the toxic metals is a global threat that has accelerated dramatically since the beginning of industrial revolution. The primary source of this pollution includes the industrial operations such as mining, smelting, metal forging, combustion of fossil fuels and sewage sludge application in agronomic practices. The metals released from these sources accumulate in soil and in turn, adversely affect the microbial population density and physico-chemical properties of soils, leading to the loss of soil fertility and yield of crops. The heavy metals in general cannot be biologically degraded to more or less toxic products and hence, persist in the environment. Conventional methods used for metal detoxification produce large quantities of toxic products and are cost-effective. The advent of bioremediation technology has provided an alternative to conventional methods for remediating the metal-poisoned soils. In metal-contaminated soils, the natural role of metal-tolerant plant growth promoting rhizobacteria in maintaining soil fertility is more important than in conventional agriculture, where greater use of agrochemicals minimize their significance. Besides their role in metal detoxification/removal, rhizobacteria also promote the growth of plants by other mechanisms such as production of growth promoting substances and siderophores. Phytoremediation is another emerging low-cost in situ technology employed to remove pollutants from the contaminated soils. The efficiency of phytoremediation can be enhanced by the judicious and careful application of appropriate heavy-metal tolerant, plant growth promoting rhizobacteria including symbiotic nitrogen-fixing organisms. This review presents the results of studies on the recent developments in the utilization of plant growth promoting rhizobacteria for direct application in soils contaminated with heavy metals under a wide range of agro-ecological conditions with a view to restore contaminated soils and consequently, promote crop productivity in metal-polluted soils across the globe and their significance in phytoremediation.     

Development of ELISA technique for the analysis of atrazine residues in water

A highly sensitive enzyme immunoassay is described for the detection of atrazine residues in water. Atrazine derivative was conjugated to Bovine Serum Albumin (BSA) to obtain an immunizing antigen and to Horseradish Peroxidase enzyme (POD) to obtain a marker for immunoassay. The formation of these conjugations was confirmed by UV spectroscopy as well as by gel-electrophoresis. Polyclonal antibodies were raised in rabbits by immunization with an atrazine-BSA conjugate containing 29 atrazine residues per BSA molecule. An ELISA on microtitration plates was optimized with peroxidase-atrazine conjugate. The middle of the test (50% B/Bo) was found to be at 90 ng/l, which is well below the maximum concentration permitted by the EC guidelines for drinking water. Detection limits for atrazine of about 1 ng/l could be reached. The assay did not require concentration or cleanup steps for drinking or ground water samples. Validation experiments showed good accuracy and precision. No cross-reactivities were shown by other s-triazines like terbutryn, ametryn, terbuthylazine, des-isopropylatrazine, and de-ethylatrazine except hydroxyatrazine. The latter was present at very low levels that can be calibrated/standardized before analysis or it may be considered as leftover residues of atrazine. Based on these results, it is suggested that this test can be applied to obtain fairly accurate results for atrazine concentration in water samples from different sources.     

Selective removal of some polyhydric phenols from aqueous solution by ferric antimonate

Ferric antimonate, a cation-exchanger, has been investigated as an adsorbent for the removal of phenol and polyhydric phenols from aqueous solution. It has been found that ferric antimonate in H+ form selectively adsorbs polyhydric phenols having hydroxyl groups on adjacent positions. While phenol, resorcinol, and quinol did not show any appreciable adsorption, catechol, pyrogallol, and gallic acid having hydroxyl groups on adjacent positions exhibited considerable adsorption on ferric antimonate. Batch equilibrium experiments were carried out to study the effect of contact time, initial concentration of phenolic compounds, and temperature on the adsorption of phenolic compounds on ferric antimonate. The equilibrium time was found to be 1.5 hours for gallic acid and pyrogallol and 2 hours for catechol and salicylic acid. The adsorption data of the phenols at temperatures of 30 degrees, 40 degrees, and 50 degrees C have been described by Langmuir and Freundlich isotherm models. The best fit was obtained with the Langmuir model in the whole range of concentrations studied at all temperatures, indicating a monolayer adsorption onto a homogeneous adsorption surface. On the basis of the Langmuir isotherm, the maximum adsorption capacity of ferric antimonate for gallic acid, pyrogallol, catechol, and salicylic acid was found to be 3.915, 3.734, 2.397, and 2.758 mg/g, respectively at 30 degrees C. The maximum sorption capacity of ferric antimonate for the phenolic compounds studied is in the following order: gallic acid > pyrogallol > salicylic acid > catechol. The adsorption of phenolic compounds was found to decrease with an increase in temperature. Thermodynamic parameters like free energy, enthalpy, and entropy changes were calculated and discussed. The adsorption of polyhydric phenols on ferric antimonate is exothermic and spontaneous in nature.     

Microbial contamination of drinking water in Pakistan—a review

Water pollution with pathogenic microorganisms is one of the serious threats to human health, particularly in developing countries. The main objective of this article is to highlight microbial contamination of drinking water, the major factors responsible for microbial contamination, and the resulting health problems in Pakistan. Furthermore, this study will be helpful for researchers and administrative agencies to initiate relevant studies and develop new policies to protect further deterioration of water supply with pathogenic microbes and ensure clean and safe drinking water to the public in Pakistan. In Pakistan, water at the source, in the distribution network, and at the consumer tap is heavily polluted with coliforms and fecal coliforms all over the country. An overview of more than 7,000 water samples reviewed here reveals that an average of over 71 and 58 % samples in the country was contaminated with total coliforms and fecal coliforms, respectively. Drinking water contamination accounts for 20 to 40 % of all diseases in the country, which causes national income losses of Rs 25–58 billion annually (US$0.25–0.58 billion, approximately 0.6–1.44 % of the country’s GDP). Improper disposal of industrial and municipal wastes is the most important factor responsible for water pollution in the country followed by cross-contamination due to old and leaking pipes and lack of water filtration and disinfection facilities. There is an urgent need for emergency steps to stop further deterioration of water quality and improve the existing water quality so as to protect the public from widespread waterborne diseases.     

Estimating soil carbon storage and mitigation under temperate coniferous forests in the southern region of Kashmir Himalayas

Soil physical and chemical properties were quantified to assess soil organic carbon (SOC) density (t ha^-1) and SOC CO2 mitigation (t ha^-1) under six forest strata Cedrus deodara (closed) (S1), Cedrus deodara (open) (S2), Abies pindrow-Picea smithiana (closed) (S3), Abies pindrow-Picea smithiana (open) (S4), Pinus wallichiana (closed) (S5) and Pinus wallichiana (open) (S6) in the southern region of Kashmir Himalayas India. Lowest average bulk density (D_b) of 0.95 was found same in S3 (σ?±?0.07) and S5 (σ?±?0.09) and highest D_b (1.08) was observed in S2 (σ?±?0.05). A relatively higher coarse fraction was observed in all the six strata ranging from 19.23 (SD?±?4.66) in S3 to 29.37 (σ?±?6.12) in S6. Soil pH ranged from 6.09 (σ?±?0.64) in S4 to 6.97 (σ?±?0.53) in S2. The region under biotic interference has observed significant deforestation and degradation in the past two decades leading to lower SOC% values compared to other studies in the adjoining regions of Indian Himalayas and temperate coniferous forests in general. SOC% values were observed to range from 1.03 (σ?±?0.22) in S2 to 2.25 (σ?±?0.23) in S3. SOC density ranged between 25.11 (σ?±?5.41) t ha^-1 in S2 and 51.93 (σ?±?5.24) t ha^-1 in S3. SOC CO2 mitigation density was found highest 190.59 (σ?±?19.23) t ha^-1 in S3 and lowest 92.16 (σ?±?19.86) t ha^-1 in S2. A significant variation was observed in SOC density within strata. SOC density values in closed strata in general exceed to those in open strata. Primary results indicate that the average SOC stock for all the strata is low due to continuous biotic pressure in the last two decades making it a potential region for SOC buildup under plus options of REDD + (Reducing emissions from deforestation and forest degradation) which includes conservation, sustainable management of forests and enhancement of forest carbon (C) stocks.