Prenatal diagnosis of a homologous Robertsonian translocation involving chromosome 15

We report the prenatal diagnosis of a fetus with a de novo Robertsonian translocation: 45,XY,der(15;15)(q10;q10). Although Robertsonian translocations are common chromosomal rearrangements, those involving homologous chromosomes are infrequent. Since chromosome 15 is imprinted, uniparental disomy (UPD) is a concern when chromosomal rearrangements involving chromosome 15 are identified. In the present case, UPD studies showed normal biparental inheritance. In contrast to the fact that most homologous acrocentric rearrangements are isochromosomes, these results indicate postzygotic formation of a Robertsonian translocation between biparentally inherited chromosomes 15. Copyright © 2001 John Wiley & Sons, Ltd.     

A systematic review of systematic reviews and meta-analyses of animal experiments with guidelines for reporting

To maximize the findings of animal experiments to inform likely health effects in humans, a thorough review and evaluation of the animal evidence is required. Systematic reviews and, where appropriate, meta-analyses have great potential in facilitating such an evaluation, making efficient use of the animal evidence while minimizing possible sources of bias. The extent to which systematic review and meta-analysis methods have been applied to evaluate animal experiments to inform human health is unknown. Using systematic review methods, we examine the extent and quality of systematic reviews and meta-analyses of in vivo animal experiments carried out to inform human health. We identified 103 articles meeting the inclusion criteria: 57 reported a systematic review, 29 a systematic review and a meta-analysis, and 17 reported a meta-analysis only. The use of these methods to evaluate animal evidence has increased over time. Although the reporting of systematic reviews is of adequate quality, the reporting of meta-analyses is poor. The inadequate reporting of meta-analyses observed here leads to questions on whether the most appropriate methods were used to maximize the use of the animal evidence to inform policy or decision-making. We recommend that guidelines proposed here be used to help improve the reporting of systematic reviews and meta-analyses of animal experiments. Further consideration of the use and methodological quality and reporting of such studies is needed.     

Harvesting creates ecological traps: consequences of invisible mortality risks in predator-prey metacommunities

Models of two-patch predator-prey metacommunities are used to explore how the global predator population changes in response to additional mortality in one of the patches. This could describe the dynamics of a predator in an environment that includes a refuge area where that predator is protected and a spatially distinct ("risky") area where it is harvested. The predator's movement is based on its perceived fitness in the two patches, but the risk from the additional mortality is potentially undetectable; this often occurs when the mortality is from human harvesting or from a novel type of top predator. Increases in undetected mortality in the risky area can produce an abrupt collapse of either the refuge population or of the entire predator population when the mortality rate exceeds a threshold level. This is due to the attraction of the risky patch, which has abundant prey due to its high predator mortality. Extinction of the refuge predator population does not occur when the refuge patch has a higher maximum per capita predator growth rate than the exploited patch because the refuge is then more attractive when the predator is rare. The possibility of abrupt extinction of one or both patches from high densities in response to a small increase in harvest is often associated with alternative states. In such cases, large reductions in mortality may be needed to avoid extinction in a collapsing predator population, or to reestablish an extinct population. Our analysis provides a potential explanation for sudden collapses of harvested populations, and it argues for more consideration of adaptive movement in designing protected areas.     

Measuring the impact of dynamic antipredator traits on predator-prey-resource interactions

This article analyzes the limitations of the most widely used method for quantifying the impact of dynamic antipredator traits on food chain dynamics and discusses alternative approaches. The standard method for a predator-prey-resource chain estimates the effects of the prey's defensive behavior by comparing population densities or fitness measures in a "predator cue" treatment to those in a no-predator treatment. This design has been interpreted as providing a measure of the "nonconsumptive effect" of the predator on the prey and the "trait-mediated indirect effect" of the predator on the resource. Other approaches involve measurements of the impact of the behavior in the presence of functional predators. The questions addressed here are: (1) How consistent are the results of different approaches? (2) How time-dependent are their results? (3) How well do they correspond to theoretical measures of effect size? (4) How useful are the measurements in understanding system dynamics? A model of a tritrophic system in which the prey species adjusts a defensive trait adaptively is used to evaluate the experimental designs. Measures of changes in prey fitness or population density in a cue treatment generally include offsetting effects of the cost of the behavior and the benefit of more resources. This means that the sign of the effect, as well as its magnitude, may change depending on when the experiment is terminated. Because predation is not present in the cue treatment, few conclusions can be drawn about the impact of the behavior on population densities or fitness of the prey in a natural setting with predators. Cue experiments often do not accurately separate trait-mediated from density-mediated effects on the resource. Most scalar measures of effects are sensitive to experimental duration and initial densities. Use of a wider range of experimental designs to measure trait-related effects is called for.     

The Bechtel Confined Zone dispersion Process for FGD Retrofit Situations Proof-of-Concept Tests

The Bechtel Confined Zone Dispersion (CZD) process for FGD retrofit situations was tested at two sites: one at a level of 5 MWe; the other at 70 MWe. The CZD process involves injecting a finely atomized slurry of hydrated lime into a straight run of duct between a boiler's air heater and its electrostatic precipitator (ESP). The effect of process variables on SO₂ removal and ESP performance was investigated for dolomitic/calcitic lime. Removals of SO₂ in excess of 50 percent were achieved for either lime type at the 5 MWe site. A very short duct length limited injection rate at the 70 MWe site, limiting sulfur removals to a maximum of 30 percent. SO₂ removal data for both sites were successfully correlated on a common basis. ESP performance was not fully acceptable during lime injection at both sites, but it is felt that optimization of ESP operations should eliminate this problem. Additional testing is recommended to further explore ESP performance and to optimize lime injection parameters. The results obtained to date continue to indicate that the CZD process is an attractive and economical candidate for FGD retrofit situations.     

Defining and measuring the impact of dynamic traits on interspecific interactions

Trait- and density-mediated indirect effects describe different pathways by which indirect interactions in food webs are propagated from one species to another, through changes in intermediate species. A series of articles in Ecology has progressively altered the original definitions of "trait-mediated" to the point where understanding is being impeded. The most recent of these articles are two meta-analyses that use "trait-mediated" to describe the demographic costs to a prey species of employing anti-predator defenses. These same articles introduce a companion term, "density-mediated interaction", apparently to describe direct and indirect interactions that only involve changes in population density due to consumption by predators. This new terminology has many disadvantages, including (1) using a general term for a relatively narrow group of processes; (2) using "mediated" in a manner inconsistent with existing terminology; (3) confusing the accepted definitions of different types of indirect effects; and (4) providing a highly incomplete measure of the impact of behavior on the predator-prey interaction. Solutions to these problems and the meaning of the meta-analyses are discussed.     

Adaptation to the Impacts of Sea Level Rise in Egypt

Assessment of the vulnerability and expected socioeconomic losses over the Nile delta coast due to the impact of sea level rise is carried out in details. Impacts of sea level rise over the Governorates of Alexandria and Port Said in particular, are evaluated quantitatively. Analysis of the results at Alexandria Governorate indicate that, if no action is taken, an area of about 30% of the city will be lost due to inundation. Almost 2 million people will have to abandon their homeland; 195,000 jobs will be lost and an economic loss of over $3.5 Billion is expected over the next century. At Port Said Governorate results indicate that beach areas are most severely affected (hence tourism), followed by urban areas. The agriculture sector is the least affected sector. It is estimated that the economic loss is over $ 2.0 Billion for 0.50 m SLR and may exceed $ 4.4 Billion for 1.25 m SLR. Options and costs of adaptation are analyzed and presented. Multi-criteria and decision matrix approaches, based on questionnaire surveys are carried out to identify priorities for the two cases. Analysis of these techniques of two options; the current policy (hard protection measures on some vulnerable areas) and no action (stopping these activities) have the lowest scores. Beach nourishment and integrated coastal zone management (ICZM) have the highest scores, however ICZM has high cost measures. The most cost-effective option is the land-use change, however with relatively very high cost measure. It is recommended that an ICZM approach be adopted since it provides a reasonable trade off between costs and cost effectiveness.     

Rangeland Fire Protection Associations as disaster response organisations

Rangeland Fire Protection Associations (RFPAs) are volunteer-based groups of trained private landowners who are authorised to respond to events in partnership with governmental agencies. This study analysed the functioning and structure of RFPAs in Idaho and Oregon in the western United States to characterise this under-researched model of disaster response. RFPAs represent an expanding type of disaster response organisation that interfaces with established fire suppression entities, yet ‘emergent behaviour’ manifested in some RFPA response actions. This appeared to lessen and mediate with time, as well as due to recognition of the issues, increased experience of fires, and training that fostered new mutual understandings. There is a need for continued examination of the effect of repeat experience in developing the characteristics of disaster response organisations. In addition, it is crucial to know how the interface between established and other types of organisations may be enhanced to make cooperative disaster response more effective.     

PFAS Experts Symposium: Statements on regulatory policy,chemistry and analytics,toxicology, transport/fate,and remediation for per‐ and polyfluoroalkyl substances (PFAS) contamination issues

Sixty leading members of the scientific, engineering, regulatory, and legal communities assembled for the PFAS Experts Symposium in Arlington, Virginia on May 20 and 21, 2019 to discuss issues related to per‐ and polyfluoroalkyl substances (PFAS) based on the quickly evolving developments of PFAS regulations, chemistry and analytics, transport and fate concepts, toxicology, and remediation technologies.  The Symposium created a venue for experts with various specialized skills to provide opinions and trade perspectives on existing and new approaches to PFAS assessment and remediation in light of lessons learned managing other contaminants encountered over the past four decades. The following summarizes several consensus points developed as an outcome of the Symposium:

• Regulatory and policy issues: The response by many states and the US Environmental Protection Agency (USEPA) to media exposure and public pressure related to PFAS contamination is to relatively quickly initiate programs to regulate PFAS sites. This includes the USEPA establishing relatively low lifetime health advisory levels for PFAS in drinking water and even more stringent guidance and standards in several states. In addition, if PFAS are designated as hazardous substances at the federal level, as proposed by several Congressional bills, there could be wide‐reaching effects including listing of new Superfund sites solely for PFAS, application of stringent state standards, additional characterization and remediation at existing sites, reopening of closed sites, and cost renegotiation among PRPs.
• Chemistry and analytics: PFAS analysis is confounded by the lack of regulatory‐approved methods for most PFAS in water and all PFAS in solid media and air, interference with current water‐based analytical methods if samples contain high levels of suspended solids, and sample collection and analytical interference due to the presence of PFAS in common consumer products, sampling equipment, and laboratory materials.
• Toxicology and risk: Uncertainties remain related to human health and ecological effects for most PFAS; however, regulatory standards and guidance are being established incorporating safety factors that result in part per trillion (ppt) cleanup objectives. Given the thousands of PFAS that may be present in the environment, a more appropriate paradigm may be to develop toxicity criteria for groups of PFAS rather than individual PFAS.
• Transport and fate: The recalcitrance of many perfluoroalkyl compounds and the capability of some fluorotelomers to transform into perfluoroalkyl compounds complicate conceptual site models at many PFAS sites, particularly those involving complex mixtures, such as firefighting foams. Research is warranted to better understand the physicochemical properties and corresponding transport and fate of most PFAS, of branched and linear isomers of the same compounds, and of the interactions of PFAS with other co‐contaminants such as nonaqueous phase liquids. Many PFAS exhibit complex transport mechanisms, particularly at the air/water interface, and it is uncertain whether traditional transport principles apply to the ppt levels important to PFAS projects. Existing analytical methods are sufficient when combined with the many advances in site characterization techniques to move rapidly forward at selected sites to develop and test process‐based conceptual site models.
• Existing remediation technologies and research: Current technologies largely focus on separation (sorption, ion exchange, or sequestration). Due to diversity in PFAS properties, effective treatment will likely require treatment trains. Monitored natural attenuation will not likely involve destructive reactions, but be driven by processes such as matrix diffusion, sorption, dispersion, and dilution.

The consensus message from the Symposium participants is that PFAS present far more complex challenges to the environmental community than prior contaminants. This is because, in contrast to chlorinated solvents, PFAS are severely complicated by their mobility, persistence, toxicological uncertainties, and technical obstacles to remediation—all under the backdrop of stringent regulatory and policy developments that vary by state and will be further driven by USEPA. Concern was expressed about the time, expense, and complexity required to remediate PFAS sites and whether the challenges of PFAS warrant alternative approaches to site cleanups, including the notion that adaptive management and technical impracticability waivers may be warranted at sites with expansive PFAS plumes. A paradigm shift towards receptor protection rather than broad scale groundwater/aquifer remediation may be appropriate.