Structure and function of rhizosphere and non-rhizosphere soil microbial community respond differently to elevated ozone in field-planted wheat

To assess the responses of the soil microbial community to chronic ozone (O₃), wheat seedlings (Triticum aestivum Linn.) were planted in the field and exposed to elevated O₃ (eO₃) concentration. Three treatments were employed: (1) Control treatment (CK), AOT40 = 0; (2) O₃-1, AOT40 = 1.59 ppm•h; (3) O₃-2, AOT40 = 9.17 ppm•h. Soil samples were collected for the assessment of microbial biomass C, community-level physiological profiles (CLPPs), and phospholipid fatty acids (PLFAs). EO₃ concentration significantly reduced soil microbial carbon and changed microbial CLPPs in rhizosphere soil, but not in non-rhizosphere soil. The results of the PLFAs showed that eO₃ concentrations had significant effects on soil community structure in both rhizosphere and non-rhizosphere soils. The relative abundances of fungal and actinomycetous indicator PLFAs decreased in both rhizosphere and non-rhizosphere soils, while those of bacterial PLFAs increased. Thus the results proved that eO₃ concentration significantly changed the soil microbial community function and composition, which would influence the soil nutrient supply and carbon dynamics under O₃ exposure.     

Effect of the veterinary ionophore monensin on the structure and activity of a tropical soil bacterial community

Abstract

Monensin (MON) is a coccidiostat used as a growth promoter that can reach the environment through fertilization with manure from farm animals. To verify whether field-relevant concentrations of this drug negatively influence the structure and activity of tropical soil bacteria, plate counts, CO₂ efflux measurements, phospholipid fatty acids (PLFA) and community-level physiological profiling (CLPP) profiles were obtained for soil microcosms exposed to 1 or 10?mg kg^?1 of MON across 11?days. Although 53% (1?mg kg^?1) to 40% (10?mg kg^?1) of the MON concentrations added to the microcosms dissipated within 5?days, a subtle concentration-dependent decrease in the number of culturable bacteria (<1 log CFU g^?1), reduced (?20 to ?30%) or exacerbated (+25%) soil CO₂ effluxes, a marked shift of non-bacterial fatty acids, and altered respiration of amines (1.22-fold decrease) and polymers (1.70-fold increase) were noted in some of the treatments. These results suggest that MON quickly killed some microorganisms and that the surviving populations were selected and metabolically stimulated. Consequently, MON should be monitored in agronomic and environmental systems as part of One Health efforts.     

Tetracycline and 4-epitetracycline modified the in vitro catabolic activity and structure of a sediment microbial community from a tropical tilapia farm idiosyncratically

Aquaculture farmers commonly add tetracycline to fish feed or to their ponds to prevent or treat bacterial infections in their crops. To assess the short-term effect of tetracycline (TET) and of one of its reversible epimers, 4-epitetracycline (ETC), on the function and structure of a sediment microbial community from a tropical tilapia farm, we contrasted community-level physiological profiles (CLPP) and phospholipid fatty acid profiles (PLFA) obtained from microcosms exposed for 12 days to 5, 10, 50, or 75 mg kg^?1of these antibiotics. Notwithstanding that the concentration of the antibiotics during the experiment decreased between 13–100% (TET) or 16–61% (ETC), both compounds provoked opposing metabolic responses that did not revert. TET displayed a tendency to inhibit respiration at concentrations < 50 mg kg^?1, whereas ETC showed the opposite effect. As revealed by the finding of the fatty acids 11:0 iso 3OH, 16:1w6c, and 18:1w6c, the sediment analyzed was predominantly colonized by Gram-negative bacteria. A marked decrease in fatty acid diversity accompanied the aforementioned metabolic responses, with TET concentrations > 50 mg kg^?1leading to an enrichment of yeast and fungal biomarkers and both antibiotics at concentrations < 10 mg kg^?1selecting for microorganisms with 11:0 iso 3OH. In agreement with CLPP data, differences between the PLFA profiles of control and treated microcosms were more pronounced for TET than for ETC. We conclude that high, yet field-relevant, concentrations of TET and ETC have the potential to modify the composition, and to a lesser extent, the functioning of a sediment microbial community. This study highlights the importance of considering antibiotic degradation products in ecotoxicological research.     

Biolog法在环境微生物功能多样性研究中的应用

微生物是生态系统的重要组成部分,它不仅要受到外界环境的影响,其自身的结构和功能变化也会对环境产生持续的作用,而这种作用主要是通过群落代谢功能差异来实现的,因此研究微生物群落功能多样性更能够揭示微生物与环境间相互作用的内在机制.Biolog法是目前已知的研究微生物代谢功能多样性的很有力的方法.为了使该项技术在更大范围上得...     

Structure and function of rhizosphere and non-rhizosphere soil microbial community respond differently to elevated ozone in field-planted wheat

To assess the responses of the soil microbial community to chronic ozone(O_3), wheat seedlings(Triticum aestivum Linn.) were planted in the field and exposed to elevated O_3(e O_3)concentration. Three treatments were employed:(1) Control treatment(CK), AOT40 = 0;(2) O_3-1, AOT40 = 1.59 ppm·h;(3) O_3-2, AOT40 = 9.17 ppm·h. Soil samples were collected for the assessment of microbial biomass C, community-level physiological profiles(CLPPs), and phospholipid fatty acids(PLFAs). EO_3 concentration significantly reduced soil microbial carbon and changed microbial CLPPs in rhizosphere soil, but not in non-rhizosphere soil.The results of the PLFAs showed that e O_3 concentrations had significant effects on soil community structure in both rhizosphere and non-rhizosphere soils. The relative abundances of fungal and actinomycetous indicator PLFAs decreased in both rhizosphere and non-rhizosphere soils, while those of bacterial PLFAs increased. Thus the results proved that e O_3 concentration significantly changed the soil microbial community function and composition, which would influence the soil nutrient supply and carbon dynamics under O_3 exposure.