Pseudomonas sp. ZXY-1, a newly isolated and highly efficient atrazine-degrading bacterium, and optimization of biodegradation using response surface methodology

Atrazine, a widely used herbicide, is increasing the agricultural production effectively, while also causing great environmental concern. Efficient atrazine-degrading bacterium is necessary to removal atrazine rapidly to keep a safe environment. In the present study, a new atrazine-degrading strain ZXY-1, identified as Pseudomonas, was isolated. This new isolated strain has a strong ability to biodegrade atrazine with a high efficiency of 9.09 mg/L/hr.Temperature, p H, inoculum size and initial atrazine concentration were examined to further optimize the degradation of atrazine, and the synthetic effect of these factors were investigated by the response surface methodology. With a high quadratic polynomial mathematical model(R~2= 0.9821) being obtained, the highest biodegradation efficiency of 19.03 mg/L/hr was reached compared to previous reports under the optimal conditions(30.71°C, pH 7.14, 4.23%(V/V) inoculum size and 157.1 mg/L initial atrazine concentration).Overall, this study provided an efficient bacterium and approach that could be potentially useful for the bioremediation of wastewater containing atrazine.     

Characterization of atrazine degradation and nitrate reduction by Pseudomonas sp. strain ADP

Concomitant atrazine degradation and nitrate reduction by a pure culture of Pseudomonas sp. strain ADP were studied. Under anoxic conditions, Ps ADP grew well and degraded atrazine efficiently in the presence of nitrate. Similar atrazine degradation rates were observed under both anoxic and aerobic conditions: 30.7±2.83 and 36.2±0.44 mg atrazine g⁻¹ cell h⁻¹, respectively. A high denitrification rate of 90.8±8.22 mg NO₃⁻-N g⁻¹ cell h⁻¹ was also observed using Ps ADP with citrate as the electron donor. The required citrate to nitrate ratio for complete denitrification was 5.11±0.15 g citrate g⁻¹ NO₃⁻-N.     

氮磷肥料对HB-5菌株降解莠去津的促进作用及去毒效应的影响

以莠去津降解细菌HB-5为研究对象,进行了氮、磷肥单一及复合施肥对HB-5细菌降解土壤中莠去津的促进作用的研究,探讨了莠去津降解率与土壤中速效氮、速效磷含量之间的关系及莠去津降解过程中生态毒性的变化情况.莠去津在土壤中的残留采用高效液相色谱法进行测定;土壤中速效氮和速效磷分别采用碱解扩散法及0.5mol/L-NaHCO3浸提-钼锑抗比色法测定;土壤的生态毒性采用蚕豆根尖微核法进行测定.结果表明,在实验的前5d,不论氮、磷肥单一或复合施肥均能够明显促进HB-5对莠去津的降解,不同施肥条件下莠去津的降解速率依次为:氮、磷肥复合单施磷肥单施氮肥不施肥料对照;实验5d后,各处理中莠去津降解率没有显著差异(p0.05),均达到了95%以上.土壤中速效氮和速效磷含量随着莠去津的降解而呈现逐渐减少的趋势.土壤的生态毒性试验结果表明,莠去津经HB-5菌株降解后,土壤的生态毒性显著降低;各施肥处理土壤中莠去津的生态毒性均低于不施肥处理的土壤;实验的前5d,各处理土壤中生态毒性的大小依次为:氮、磷肥复合单施磷肥单施氮肥不施肥料对照.实验7d时,各处理土壤中莠去津的生态毒性均恢复到空白对照水平.氮磷肥料的施用不仅能促进HB-5菌株对土壤中莠去津的降解,而且能加速降低土壤的生态毒性,为莠去津污染土壤的快速修复提供了理论依据.     

Isolation and characterization of Sporobolomyces sp. LF1 capable of degrading chlorimuron-ethyl

A yeast strain which was capable of degrading sulfonylurea herbicide chlorimuron-ethyl named as LF1 was isolated from a chlorimuron-ethyl contaminated soil near the warehouse of the factory producing chlorimuron-ethyl in Shenyang City, Northeast China. The strain was identified as Sporobolomyces sp., based on its morphological and physiological characteristics and the phylogenetic analysis of 18S rRNA gene sequence. So far, this is the only yeast strain of Sporobolomyces sp. which is able to degrade chlorimuronethyl. Incubation tests showed that when the initial concentration of chlorimuron-ethyl in culture was 5 mg/L, LF1 could degrade more than 77% of the herbicide after incubation for 4 d at 30°C. The possible mechanism of chlorimuron-ethyl degradation by LF1 could be the acidic hydrolysis caused by the acids from the metabolism of the yeast strain. Further study should be conducted to examine the pathways of chlorimuron-ethyl degradation by LF1 and to approach the feasibility of using LF1 to degrade the chlorimuron-ethyl in soil system.     

一株丁草胺降解菌的分离鉴定及培养条件优化

利用富集培养技术从长期施用丁草胺的稻田土壤中分离得到1株能够降解丁草胺的细菌,标记为LYC-2.经形态特征、生理生化特征和16SrDNA序列分析,将该菌株鉴定为钩杆菌属(Ancylobacter sp.).同时,为探索菌株LYC-2的生长特性和最佳培养条件,利用正交试验设计法考察了接种量、温度、pH值3个因素对菌株LYC-2生长的影响.结果表明,菌株LYC-2的最适生长温度为35℃,最适pH值为7.5.当接种量为6%(体积分数,下同)时,该菌株在含100mg.L-1的丁草胺无机盐基础培养液中培养5d后,可使丁草胺降解率达90.85%以上.     

Methylopila sp.SD-1与大豆联合修复苯磺隆污染土壤

分离得到1株苯磺隆降解菌株SD-1,根据表型、生理生化特征及16S rRNA基因序列分析,将其鉴定为Methylopila sp.SD-1,为首次报道能够降解苯磺隆的Methylopila属菌株,其在4d内完全降解50mg/L苯磺隆,最适降解温度、pH值分别为30℃和7.0,降解中间产物对大豆的毒性显著降低.大豆根系分泌物能促进菌株SD-1的生长,培养5d,菌株SD-1的数量由1.0×10⁷CFU/mL增至6.7×10⁷CFU/mL.分泌物中含有16种氨基酸,菌株SD-1对其中的Asp、Glu和Phe表现出明显的趋化性.接种菌悬液至苯磺隆污染土壤（3mg/kg）并种植大豆幼苗,培养4d,菌株SD-1依赖趋化性向大豆根系运动并定殖,存活率提高,根际土壤中苯磺隆的降解率相较于未种植大豆的处理提高36.0%.     

一株DDT降解菌的筛选及其降解特性

以DDT为目标污染物,通过筛选获得了一株效果稳定的DDT降解菌,并对其进行形态学观察,生理生化特性及16S rRNA测序鉴定.经鉴定,该菌株属于甲基菌属（Methylovorus）,命名为Methylovorus sp. XLL03.菌株在pH值为7,温度30℃,外加碳源浓度0.5%,初始DDT浓度20mg/L时生长量最大.在pH值为6,温度30℃下,外加碳源（葡萄糖）浓度0.1%,初始DDT浓度20mg/L时对DDT的降解率最大.在优化条件下,4d后菌株XLL03对DDT最高降解率可达50.4%.利用GC-MS对DDT的降解中间产物进行定性分析,初步推断在菌株XLL03中,DDT最初分别通过脱氯和脱氯化氢生成DDD和DDE,随后DDD和DDE进一步脱氯得到DDMU,最终DDMU开环后又经过一系列反应被彻底矿化.在DDT的代谢过程中,未发现代谢中间产物的积累,表明菌株XLL03在修复受DDT污染的水或土壤中具有一定的应用前景.     

Methylopila sp.SD-1与大豆联合修复苯磺隆污染土壤

分离得到1株苯磺隆降解菌株SD-1,根据表型、生理生化特征及16S rRNA基因序列分析,将其鉴定为Methylopila sp.SD-1,为首次报道能够降解苯磺隆的Methylopila属菌株,其在4d内完全降解50mg/L苯磺隆,最适降解温度、pH值分别为30℃和7.0,降解中间产物对大豆的毒性显著降低.大豆根系分泌物能促进菌株SD-1的生长,培养5d,菌株SD-1的数量由1.0×10⁷CFU/mL增至6.7×10⁷CFU/mL.分泌物中含有16种氨基酸,菌株SD-1对其中的Asp、Glu和Phe表现出明显的趋化性.接种菌悬液至苯磺隆污染土壤（3mg/kg）并种植大豆幼苗,培养4d,菌株SD-1依赖趋化性向大豆根系运动并定殖,存活率提高,根际土壤中苯磺隆的降解率相较于未种植大豆的处理提高36.0%.     

假单胞菌P1-1脱氮除磷特性及其动力学研究

利用实验室中筛选到的假单胞菌P1-1菌株进行脱氮除磷研究,并探讨了温度、pH、接种量、摇床转速和碳源对该菌株生长和脱氮除磷的影响,同时研究了菌株除磷的动力学。结果表明,该菌株最佳生长条件为摇床转速140 r/min、接种量10%、pH 8.0、温度30℃,最佳除磷条件为摇床转速140 r/min、接种量10%、温度30℃、pH 8.0,最佳脱氮条件为接种量10%、摇床转速0、温度30℃、pH 7.0;该菌株在比较好的生长和脱氮除磷效果时需要乙酸钠的最低浓度为1 000 mg/L;当初始P浓度为6~21 mg/L时,菌株除磷的动力学过程符合Monod零级反应模型。     

氯嘧磺隆降解菌的筛选及对污染土壤的生物修复

采用富集培养方法从江苏某激素研究所污水处理池排污口污泥中分离得到1株氯嘧磺隆降解菌,经菌株形态学特征和26S rDNA序列分析,鉴定为胶红酵母菌（Rhodotorula mucilaginosa ）.经降解条件优化,菌株对含100mg/L氯嘧磺隆的无机盐培养基中氯嘧磺隆的最佳降解条件为：接种量2.5%,培养温度28℃,pH 6.0,培养5d后降解率为87.33%;在氯嘧磺隆初始浓度为10mg/kg（干土）的模拟污染土壤中,菌株最佳降解条件为：接种量2.5%,温度25℃,pH 6.0,土壤含水量30%,静息培养30d后降解率为90.74%.土壤修复实验结果表明,施加胶红酵母菌后减轻了氯嘧磺隆对小麦幼苗的药害,在氯嘧磺隆浓度为10mg/kg的土壤中投加降解菌后,小麦的出苗率、株高、根长及鲜重均明显高于未投加降解菌的对照组（P < 0.05）.     

DMF降解菌MBYD-1的分离、鉴定及降解特性

从农药厂污水处理池的活性污泥中分离得到一株能以二甲基甲酰胺(DMF)为唯一碳、氮源生长的菌株MBYD-1.经形态观察、生理生化实验及16S rRNA基因序列分析,将菌株初步鉴定为假单胞菌属 (Pseudomonas sp.).菌株MBYD-1降解DMF的最适条件为:pH 7.0,30℃.当DMF浓度为400mg/L,接种量为2%时,菌株能在72h内将DMF完全矿化.底物广谱性实验表明,菌株MBYD-1能在甲酸盐和甲醛中很好地生长,在甲酰胺中的生长情况优于二甲胺.     

Biodegradation of phenol by free and immobilized Acinetobacter sp. strain PD12

A new phenol-degrading bacterium with high biodegradation activity and high tolerance of phenol, strain PD 12, was isolated from the activated sludge of Tianjin Jizhuangzi Wastewater Treatment Facility in China. This strain was capable of removing 500 mg phenol/L in liquid minimal medium by 99.6% within 9 h and metabolizing phenol at concentrations up to 1100 mg/L. DNA sequencing and homologous analysis of 16S rRNA gene identified PD12 to be an Acinetobacter sp. Polyvinyl alcohol （PVA） was used as a gel matrix to immobilize Acinetobacter sp. strain PDI2 by repeated freezing and thawing. The factors affecting phenol degradation of immobilized cells were investigated, and the results showed that the immobilized cells could tolerate a high phenol level and protected the bacteria against changes in temperature and pH. Storage stability and reusability tests revealed that the phenol degradation functions of immobilized cells were stable after reuse for 50 times or storing at 4℃ for 50 d. These results indicate that immobilized Acinetobacter sp. strain PD 12 possesses a good application potential in the treatment of phenol-containing wastewater.     

两株假单胞菌降解酚类化合物的特性

从焦化废水中分离得到2株可降解对氯酚的假单胞菌(Pseudomonas)CO-1和CO-44.其最适降解温度为35~40℃,最适pH值为6.0~8.0.菌株降解对氯酚的速度与对氯酚初始浓度呈负相关.2株细菌均能较快地降解苯酚和甲酚,其中CO-1还能够降解1-萘酚和萘.在添加对氯酚的焦化废水中,CO-1和CO-44能够在42h内将苯酚、甲酚和对氯酚完全降解.从2株细菌中均检测到了苯酚羟化酶基因,分别从菌株CO-1和CO-44中检测到邻苯二酚1,2-双加氧酶基因和邻苯二酚2,3-双加氧酶基因.     

苯酚降解红球菌的分离鉴定及降解特性研究

采用富集培养的方法,从唐山污水处理厂附近的植物根际土中分离得到1株高效苯酚降解菌11-111。该菌株为革兰氏阳性菌,可以在以苯酚为唯一碳源和能源的无机盐培养基上生长,能够耐受最高浓度为2 000 mg/L的苯酚。对该菌株的降解性能研究表明,在温度24~32℃,pH值6.5~8.5,装液量≤20 mL(100 mL摇瓶)范围内,摇床转速为160 r/min,菌株对初始浓度500~1 500 mg/L的苯酚均能有效降解。根据该菌株的形态、生理生化特性和16S rRNA基因序列同源性分析结果,鉴定为红球菌属(Rhodococcus sp.)菌株。该菌株具有较强的环境适应能力和苯酚降解能力,有较高的研究价值及应用前景。     

亚硝酸盐降解菌的分离鉴定及其降解特性

从活性污泥中分离得到一株能以亚硝酸盐为唯一氮源生长的异养硝化细菌53,根据其形态、生理生化特性以及16S rRNA基因序列相似性分析结果,将其初步鉴定为假单胞菌属(Pseudomonas sp.)。研究了亚硝酸盐的初始浓度、pH、温度、接种量4个影响因素对菌株53降解亚硝酸盐效果的影响,确定了最适降解条件。结果表明,该菌株在亚硝酸盐浓度10 mg/L、培养温度30℃、pH为8.0、接种量5%条件下,接种24 h后对亚硝酸盐的降解率达到94.8%以上。在亚硝酸盐质量浓度为5mg/L的10L污染水体模拟实验中,按1%的接种量接入53发酵菌液(A600nm≈0.4),在30℃的水温条件下经4 d,53菌株对亚硝酸的降解率可达96.52%,处理后水体中亚硝酸盐的含量能达到养殖水体标准。表明该菌株对污染水体中的亚硝酸盐具有较强的降解效果。     

3-PBA降解菌BA3的降解特性及基因工程菌构建

从石油污染土壤中分离到1株能以3-苯氧基苯甲酸(3-PBA)为唯一碳源生长的细菌,命名为BA3.根据其生理生化特征和16S rDNA序列相似性分析,将该菌鉴定为鞘脂菌属(Sphingobium sp.).该菌株在60 h内对100 mg·L-1的3-苯氧基苯甲酸的降解率达到99%.降解3-苯氧基苯甲酸的最适温度为30℃...     

酚降解菌株的分离、鉴定和在含酚废水生物处理中的应用

从石油化工厂的活性污泥和废水混合物中分离到10个降解酚的细菌菌株,经16S rRNA基因序列分析,5个菌株(PD1、PD2、PD6、PD7和PD39)被鉴定为假单胞菌(Pseudomonas sp.),4个菌株(PD4、PD5、PD8和PD9)为不动杆菌(Acinetobacter sp.),1个菌株(PD3)为丛毛单胞菌(Comamonas sp.).对假单胞菌(Pseudomonas sp.)PD39菌株的酚降解特性、最适生长条件、降解底物的范围、儿茶酚1,2-双加氧酶(C12O)和儿茶酚2,3-双加氧酶(C23O)活性、含酚废水的生物处理等,进行了详细研究.结果表明,PD39菌株的最适生长和降解条件是,培养基的起始pH为7.0,培养温度为30℃,酚浓度为800 mg/L,对酚的最大降解浓度为1 200 mg/L.酚浓度为637 mg/L的工业废水经72 h处理酚的去除率达到99.96%.PD39菌株有很好的应用潜力来作含酚废水活性污泥处理系统的强化菌株.     

生物油降解菌的分离鉴定及其在土壤中的降解特性

从造纸厂内废水处理池中采取活性污泥,筛选出一株能高效降解生物油的菌株EL5.对该菌株在土壤中对生物油降解能力进行了初步研究;建立了基于CO₂生成量的生物降解测定方法,并运用该方法,对生物油生物降解性能进行了评定.结果表明:①通过富集培养方法分离得到菌株EL5,根据形态特征以及生理化特性分析,将EL5鉴定为杂色曲霉菌(Aspergill versicoir).②菌株EL5对5种常见抗生素敏感.③菌株EL5在降解生物油的过程中,生物降解率与温度呈正相关关系.考虑到实际应用情况,选择30 ℃为适宜降解温度.pH为中性条件下对生物油的降解较为有利.随着w(生物油)的增加生物降解率有一定的下降,但相同条件下,加菌后30 ℃下10 d对w(生物油)为1 200 mg/kg的土壤的生物降解率达40%,而未加菌的生物降解率只有6%.④菌株EL5还可以以苯、对氯苯酚、甲苯和二甲苯等芳香类化合物作为唯一碳源生长繁殖.      

苯醚甲环唑降解菌B2的分离、鉴定及其降解特性

从长期生产苯醚甲环唑的农药厂污泥中分离到1株能以苯醚甲环唑为唯一碳源生长的细菌,命名为B2.根据其生理生化特征和16S rRNA基因序列相似性分析,将该菌株鉴定为剑菌属(Ensifer sp.).菌株B2在24h内降解100mg/L的苯醚甲环唑的效率达85%以上.该菌株降解苯醚甲环唑的最适pH值为7.0,最适温度为30~35℃,降解速率与初始接种量呈正相关,与初始农药浓度呈负相关.基础盐培养基中,B2对初始浓度>400mg/L的苯醚甲环唑几乎无降解作用.