Urban Plants as Genetic Reservoirs or Threats to the Integrity of Bushland Plant Populations

Abstract:  Remnant plants in urban fringes and native plants in gardens have the potential to contribute to the conservation of threatened plants by increasing genetic diversity, effective size of populations, and levels of genetic connectedness. But they also pose a threat through the disruption of locally adapted gene pools. At Hyams Beach, New South Wales, Australia, four bushland stands of the rare shrub, Grevillea macleayana McGillivray, surround an urban area containing remnant and cultivated specimens of this species. Numbers of inflorescences per plant, fruits per plant, and visits by pollinators were similar for plants in urban gardens and bushland. Urban plants represented a substantial but complex genetic resource, displaying more genetic diversity than bushland plants judged by H_e , numbers of alleles per locus, and number of private alleles. Of 27 private alleles in urban plants, 17 occurred in a set of 19 exotic plants. Excluding the exotic plants, all five stands displayed a moderate differentiation ( F_ST = 0.14 ± 0.02), although the urban remnants clustered with two of the bushland stands. These patterns may be explained by high levels of selfing and inbreeding in this species and by long-distance dispersal (several seeds in the urban stand were fathered by plants in other stands). Genetic leakage (gene flow) from exotic plants to 321 seeds on surrounding remnant or bushland plants has not occurred. Our results demonstrate the conservation value of this group of urban plants, which are viable, productive, genetically diverse, and interconnected with bushland plants. Gene flow has apparently not yet led to genetic contamination of bushland populations, but high levels of inbreeding would make this a rare event and difficult to detect. Remnant plants in urban gardens could successfully contribute to recovery plans for endangered and vulnerable species.     

Tree mortality following partial harvests is determined by skidding proximity

Recently developed structural retention harvesting strategies aim to improve habitat and ecological services provided by managed forest stands by better emulating natural disturbances. The potential for elevated mortality of residual trees following such harvests remains a critical concern for forest managers, and may present a barrier to more widespread implementation of the approach. We used a harvest chronosequence combined with dendrochronological techniques and an individual-based neighborhood analysis to examine the rate and time course of residual-tree mortality in the first decade following operational partial "structural retention" harvests in the boreal forest of Ontario, Canada. In the first year after harvest, residual-tree mortality peaked at 12.6 times the preharvest rate. Subsequently, mortality declined rapidly and approached preharvest levels within 10 years. Proximity to skid trails was the most important predictor both of windthrow and standing death, which contributed roughly equally to total postharvest mortality. Local exposure further increased windthrow risk, while crowding enhanced the risk of standing mortality. Ten years after harvest, an average of 10.5% of residual trees had died as a result of elevated postharvest mortality. Predicted cumulative elevated mortality in the first decade after harvest ranged from 2.4% to 37% of residual trees across the observed gradient of skid trail proximity, indicating that postharvest mortality will remain at or below acceptable rates only if skidding impacts are minimized. These results represent an important step toward understanding how elevated mortality may influence stand dynamics and habitat supply following moderate-severity disturbances such as partial harvests, insect outbreaks, and windstorms.     

Developing a Sampling Strategy for Baptisia arachnifera Based on Allozyme Diversity

We analyzed the amount and distribution of genetic variation in Baptisia arachnifera Duncan to develop a sampling strategy for ex situ research. Baptisia arachnifera is an endangered plant species endemic to the coastal plain of Georgia (U.S.) where all populations are within 16 km of each other. A reduction in numbers of individuals has been observed during the last 50 years. Baptisia arachnifera was polymorphic at 24% of the 37 loci examined with an average of 1.32 alleles per locus. The genetic diversity index was relatively low ( H_e = 0.097) as expected for endemic species. Populations were in Hardy-Weinberg equilibrium, suggesting that the species is outcrossing. Consistent with this conclusion is the observation that the majority (approximately 90%) of the genetic variation present in the species is found within individual populations. Indirect evidence of gene flow between populations was detected (   Nm = 2.35). The close proximity of the populations and the recent reduction in population sizes suggest that the populations surveyed may be fragments of a once more continuous gene pool. Based on the observed distribution of genetic diversity among populations (G_ST = 0.096), sampling two populations would capture 99% of the allozyme diversity surveyed. Allozyme data were used to determine which 2 of the 10 populations surveyed should be sampled to maximize the ex situ conservation of genetic diversity. Although the paper-producing companies that own most of the land where Baptisia arachnifera occurs are modifying their harvesting techniques, the species could become extinct without more effective management and preservation efforts.     

Multigenerational genetic analysis of tropical secondary regeneration in a canopy palm

Iriartea deltoidea (Arecaceae) is an abundant canopy palm with a wide geographic distribution in Neotropical wet forests. We analyzed the genetic profile across three generations of Iriartea within a 43-ha area encompassing two areas of second-growth and adjoining old-growth forest at La Selva Biological Field Station in northeastern Costa Rica. A total of 311 reproductively mature trees, 99 large saplings, 207 small saplings, and 601 seedlings were genotyped using 141 AFLP loci. Parentage analysis revealed high dispersal distances, both for seed (over 2.3 km) and pollen (over 3.8 km), indicating a large genetic neighborhood within La Selva Biological Station. In a 20-ha area of second growth, the founding palm population was dominated by a small number of parental trees located in the adjacent old-growth forest; two old-growth trees contributed 48% of the second-growth genes. The genetic diversity of reproductively mature trees in this second-growth forest was significantly reduced compared to adjacent old-growth forest. Within 400 m of the border with old-growth forest, we observed a similar reduction of genetic diversity in saplings, and an even greater loss of genetic diversity in the second generation of seedlings. Nearly half of these seedlings were offspring of local parents. In contrast, in the distant portion of second-growth forest (400-800 m from the old-growth border), parentage analysis showed that 40% of seedlings originated from outside the study area and only 10% were offspring of local parents. These high levels of gene flow maintained genetic diversity in saplings and seedlings similar to levels observed in old-growth forest. Our findings highlight the importance of gene flow from diverse seed and pollen sources for sustaining levels of genetic diversity of tree populations in second-growth forests.     

Hotspots of Epiphytic Lichen Diversity in Two Young Managed Forests

Understanding within-stand variation in diversity of epiphytes will provide an improved basis for producing timber while conserving biological diversity. Two 80-ha, 50–year–old managed stands of conifers were surveyed to locate 0.4 ha putative "diversity" plots, the areas appearing most diverse in lichen epiphytes. These plots were generally located in areas made heterogeneous by canopy gaps, wolf trees (trees with large-diameter lower branches), and old-growth remnant trees. "Matrix" plots, in contrast, were chosen at random from the remaining, more homogenous forest. Diversity plots hosted from 25% to 40% more epiphytic lichen species than matrix plots in both stands. The strongest within-stand gradients in species composition were correlated with percentage of plot occupied by gaps and wolf trees. Percentage of the plot in gaps was correlated with species richness (r = 0.79). In the more structurally diverse stand, diversity and abundance of nitrogen-fixing "cyanolichens" were correlated with percentage of the plot occupied by gaps (0.5 < r < 0.9), and alectorioid lichens were correlated with percentage of the plot occupied by old-growth remnant trees (0.5 < r < 0.6). In the stand with more homogenous structure, percentage of the plot under gaps was correlated with regionally common species that were otherwise absent or sparse in the matrix. Protecting gaps, hardwoods, wolf trees, and old-growth remnant trees during thinning or other partial cutting is likely to promote the majority of epiphytic macrolichens in young conifer forests. Because these features are easily recognized on aerial photos and on the ground by land managers, it is practical to manage for forest structures that would promote lichen diversity.     

Forest structure and light regimes following moderate wind storms: implications for multi-cohort management.

Moderate-severity disturbances appear to be common throughout much of North America, but they have received relatively little detailed study compared to catastrophic disturbances and small gap dynamics. In this study, we examined the immediate impact of moderate-intensity wind storms on stand structure, opening sizes, and light regimes in three hemlock-hardwood forests of northeastern Wisconsin. These were compared to three stands managed by single-tree and group selection, the predominant forest management system for northern hardwoods in the region. Wind storms removed an average of 41% of the stand basal area, compared to 27% removed by uneven-aged harvests, but both disturbances removed trees from a wide range of size classes. The removal of nearly half of the large trees by wind in two old-growth stands caused partial retrogression to mature forest structure, which has been hypothesized to be a major disturbance pathway in the region. Wind storms resulted in residual stand conditions that were much more heterogeneous than in managed stands. Gap sizes ranged from less than 10 m2 up to 5000 m2 in wind-disturbed stands, whereas the largest opening observed in managed stands was only 200 m2. Wind-disturbed stands had, on average, double the available solar radiation at the forest floor compared to managed stands. Solar radiation levels were also more heterogeneous in wind-disturbed stands, with six times more variability at small scales (0.1225 ha) and 15 times more variability at the whole-stand level. Modification of uneven-aged management regimes to include occasional harvests of variable intensity and spatial pattern may help avoid the decline in species diversity that tends to occur after many decades of conventional uneven-aged management. At the same time, a multi-cohort system with these properties would retain a high degree of average crown cover, promote structural heterogeneity typical of old-growth forests, and maintain dominance by late-successional species.     

Genetic Diversity in the Endangered Lily Harperocallis flava and a Close Relative, Tofieldia racemosa

We examined genetic diversity in 464 individuals of the monotypic lily Harperocallis flava in its two habitats (seepage bogs and a roadside right-of-way) and five populations of a co-occurring related lily, Tofieldia racemosa. The endangered H. flava, endemic to the Apalachicola lowlands of the Florida panhandle, was monomorphic for the 22 loci scored. In contrast, T. racemosa had a high proportion of polymorphic loci ( P_s = 68.2%; P_p = 47.7%) with moderate genetic diversity (   H_es = 0.134; H_ep = 0.114). Estimated gene flow was moderately high ( Nm = 2.07) for T. racemosa, with most (93%) of the total genetic diversity found within populations. Despite the low level of genetic divergence, some isolation by distance was detected among T. racemosa populations. Harperocallis flava and other species without discernable genetic variation pose special problems for conservation biologists because genetic criteria are not available for the development of ex situ and in situ conservation and management strategies.     

Morphometric and electrophoretic analysis of 13 populations of Anatolian black pine in Turkey

The genetic variation in populations of Anatolian black pine (Pinus nigra Arn. subsp. pallasiana (L.) Holmboe.), one of the species covering large areas in Turkey, was investigated. Open pollinated seeds were collected from 13 populations in a natural distribution range. Six characters of seeds (length, width, ratio of length to width, weight/1000 seeds) and seedling characters (cotyledon number and hypocotyls height) and two enzyme systems viz. leucine aminopeptidase (LAP) and glutamate oxaloacetate transaminase, (GOT) were investigated. Significant differences were detected among the populations for the morphological characters. In addition, isozyme patterns of two enzyme systems revealed that LAP has two loci (one with 2 alleles and the other with 3), while GOT has three loci (two with 3 alleles and the third one with 2 alleles). Polymorphic loci were 74% on the average. The mean number of alleles per loci was 1.94 and expected heterozygosity was 19%. The mean total genetic diversity was calculated as 0.203; the mean gene diversity within populations was determined as 0.188, and the average between subpopulations diversity was 0.016. The relative magnitude of genetic differentiation among subpopulations was measured as 0.074 indicating that only 7.4% of the total genetic diversity was there between populations. Average genetic distance was 0.093 according to Gregorius. Nei's genetic distance was 0.022.     

Effects of Selection Cutting and Landscape-Scale Harvesting on the Reproductive Success of Two Neotropical Migrant Bird Species

Abstract: We measured the effects of forest harvesting at two spatial scales on the productivity of two Neotropical migrant bird species, the Black-throated Blue Warbler (   Dendroica caerulescens ) and the Ovenbird (  Seiurus aurocapillus ). We selected two forest landscapes representing extremes in harvesting intensity for northwestern New Brunswick, Canada. Within each landscape, we selected study plots located either in recent (<5 years) selection-cut stands (30% removal every 20 years) or in stands that were lightly harvested at least 30 years ago. Black-throated Blue Warblers reached higher densities in selection cuts, but their reproductive performance ( pairing and fledging success) did not differ significantly between stand types (uncut vs. selection cut) or between landscape types (intensively vs. moderately harvested). In 1998, nonetheless, 61% of the estimated number of fledglings produced in our plots were born in selection cuts. In contrast, this proportion was only 23% for Ovenbirds in 1998 and 1999 combined. Ovenbirds had lower densities, and their reproductive performance was significantly lower in selection cuts than in uncut plots. These results indicate that the effects of selection cutting on demography are species-specific and that Ovenbird persistence in selection cuts may be compromised unless the intensity or frequency of cutting is decreased.     

Effective Population Size and Maintenance of Genetic Diversity in Captive-Bred Populations of a Lake Victoria Cichlid

Abstract: We used microsatellite DNA markers to investigate the maintenance of genetic diversity within and between samples of subpopulations (spanning five captive-bred generations) of the haplochromine cichlid Prognathochromis perrieri . The subpopulations are maintained as part of the Lake Victoria Cichlid species survival plan. Changes in the frequencies of 24 alleles, over four polymorphic loci, were used to estimate effective population size (   N _e   ). Point estimates of N _e ranged from 2.5 to 7.7 individuals and were significantly smaller than the actual census size (   N _obs  ) for all subpopulations (32–243 individuals per generation), with the corresponding conservative N _e   /  N _obs ratios ranging from 0.01 to 0.12. Approximately 19% of the initial alleles were lost within the first four generations of captive breeding. Between-generation comparisons of expected heterozygosity showed significant losses ranging from 6% to 12% per generation. Seven private alleles were observed in the last sampled generation of four subpopulations, and analysis of population structure by F _ST indicated that approximately 33% of the total genetic diversity is maintained between the subpopulations from different institutions. To reduce the loss of genetic variation, we recommend that offspring production be equalized by periodically removing dominant males, which will encourage reproduction by additional males. Consideration should also be given to encouraging more institutions to maintain populations, because a significant fraction of the genetic variation exists as among-population differences resulting from random differentiation among subpopulations.     

Genetic variability and differentiation of sporophytes and gametophytes in populations of Gelidium arbuscula (Gelidiaceae: Rhodophyta) determined by isozyme electrophoresis

Genetic differentiation and genetic variability of sporophytic and gametophytic populations of Gelidium arbuscula (Bory) from three localities sampled in 1989 and 1990 in the Canary Islands (Spain) were examined by isozyme electrophoresis. Twenty-three to 29 putative alleles corresponding to 22 gene loci, were compared. High deviations in Hardy-Weinberg equilibrium, and significant differences between allelic frequencies of sporophytic and gametophytic subpopulations at the same locality were found, suggesting a predominant asexual reproduction of G. arbuscula. The genetic variability (percentage of polymorphic loci, mean number of alleles per locus and average gene diversity) of haploid subpopulations was lower than that of diploid subpopulations at all three localities, being the lowest described for seaweeds. No correlation between genetic and geographical distance was found. The high genetic differentiation coefficient between all subpopulations suggests a very reduced genetic flow between subpopulations of the same and of different localities. These results suggest that the genetic structure of the populations of G. arbuscula from the Canary Islands is due to a founder-effect combined with a predominance of asexual reproduction. This is the first report comparing allelic frequencies between sporophytic and gametophytic subpopulations of seaweeds.     

A regional forest ecosystem carbon budget model: impacts of forest age structure and landuse history

This study investigated the impacts of landuse history and forest age structure on regional carbon fluxes for the forests in the Pacific Northwest of the United States based on a two-stage modeling strategy. In the first stage, an individual-based forest ecosystem carbon flux model (IntCarb) at stand scale is developed. IntCarb combines components from the ZELIG and CENTURY models to simulate forest development and heterotrophic respiration, respectively. Stand scale carbon fluxes simulated by IntCarb strongly depend on stand age. A forest stand can be a carbon sink for up to 200 years old with a peak at 30–40 years old. Old-growth stands are carbon neutral to the atmosphere in the long term. For any particular year, an old-growth stand can be either a carbon sink or source. The interannual variation of Net Ecosystem Productivity (NEP) for an old-growth stand is primarily determined by heterotrophic respiration. Due to the high spatial variability of stand ages, forest age structure needs to be taken into account to improve estimation of carbon budgets of forest ecosystems over large areas. In the stand stage, a regional carbon budget model (RegCarb) is developed to estimate regional carbon fluxes over large areas based on forest age structure, adjusting for the nonrespiratory carbon losses (timber harvesting). Our initial estimate with RegCarb for the Pacific Northwest of the United States indicates that this region was a tremendous carbon source to the atmosphere from 1890 to 1990 due to extensive logging of old-growth forest. Projection for the role of forests in this region in global carbon cycle in the future strongly depend on the amount of timber to be harvested, i.e. how the age structure of forests in this region is to be altered.     

Relation of Terrestrial-Breeding Amphibian Abundance to Tree-Stand Age

There is a lack of research on the effects of logging on Canadian amphibians. We compared the abundance of terrestrial salamanders in old-growth forests with that in young and mature post-harvest stands. We also measured habitat features of amphibians and contrasted these with old-growth and harvested stands to assess the effects of forest harvest. Quadrat searches demonstrated that clearcut harvesting reduces terrestrial amphibian populations by up to 70% in coastal old-growth forests. We suggest that this reduction results from a decrease in availability of moist microhabitats. Salamander densities within 10 meters of streams in managed stands were similar to those near and away from streams in old growth. We recommend that forest managers recognize the needs of terrestrial amphibians and help maintain amphibian populations by preserving cool, moist habitats. This can be accomplished within cutblocks by (1) maintaining an even distribution of logs and snags as stable, moist microhabitats; (2) retaining some understory as sources of shade, and (3) preserving streamside buffers. Managers must also ensure some level of landscape connectivity to enable climate-sensitive amphibians to disperse and recolonize marginal habitats.     

Old-Growth Mangrove Forests in the United States

Criteria used to identify old-growth forests in the Pacific Northwest have not been proven applicable in other ecological life zones. For example, Pacific Northwest criteria are not suitable for the identification of old-growth mangrove forests. To identify old-growth mangroves one has to take into account differences in stand structure and function due to geomorphology, within-site environmental gradients, and regional disturbance regimes. A flexible and holistic approach is needed. Stand age, defined in terms of Pacific Northwest forests, is not necessarily the best criterion for identifying for conservation mangrove forests or any forest outside the Pacific Northwest. No single stand will have all old-growth characteristics, and even if they are present in a stand, these characteristics do not necessarily assure that the stand is old growth. Whether a mangrove stand reaches old-growth stage depends on the dynamics of coastal conditions under which it grows. Moreover, it is necessary to differentiate between the age of trees in a stand and the age of the mangrove system, which includes the substrate. Old-growth mangrove stands are improbable states for this ecosystem type, and they can revert to younger stages. Mangroves offer a challenge to the concept of the old-growth forest, and through our analysis of this system we show that when ecosystem functions and states are evaluated it is necessary to avoid geographic biases based on particular ecological conditions.     

A spatially explicit empirical model of structural development processes in natural forests based on climate and topography

Stand structure develops with stand age. Old-growth forests with well-developed stand structure support many species. However, development rates of stand structure likely vary with climate and topography. We modeled structural development of 4 key stand variables and a composite old-growth index as functions of climatic and topographic covariates. We used a hierarchical Bayesian method for analysis of extensive snap-shot National Forest Inventory (NFI) data in Japan (n = 9244) to account for differences in stand age. Development rates of structural variables and the old-growth index exhibited curvilinear responses to environmental covariates. Flat sites were characterized by high rates of structural development. Approximately 150 years were generally required to attain high values (approximately 0.8) of the old-growth index. However, the predicted age to achieve specific values varied depending on environmental conditions. Spatial predictions highlighted regional variation in potential structural development rates. For example, sometimes there were differences of >100 years among sites, even in the same catchment, in attainment of a medium index value (0.5) after timber harvesting. The NFI data suggested that natural forests, especially old natural forests (>150 years), remain generally on unproductive ridges, steep slopes, or areas with low temperature and deep snow, where many structural variables show slow development rates. We suggest that maintenance and restoration of old natural forests on flat sites should be prioritized for conservation due to the likely rapid development of stand structure, although remaining natural forests on low-productivity sites are still important and should be protected.     

Highly Differentiated Populations of the Narrow Endemic Plant Maguire Primrose (Primula maguirei)

Maguire primrose (Primula maguirei) is a geographically restricted plant species, known only from a 19-km stretch of Logan Canyon in northern Utah (U.S.A.). We examined variation at 13 isozyme loci from 25 individuals of P. maguirei at each of eight sites. At individual loci we detected no statistically significant deviations from Hardy-Weinberg proportions within sites (subpopulations). However, some loci were almost fixed for different alleles at the upper reaches of the species' range relative to populations approximately 10 km away. The total mean gene diversity among loci was 0.22, of which 55% was partitioned within subpopulations, 0.7% among subpopulations within populations (100 m spatial scale), 3% among populations separated by about 1 km, and 41% between an Upper Canyon group of populations and a Lower Canyon group (10-km scale). We detected no gametic disequilibria among loci within subpopulations (and populations). Two hypotheses are proposed to explain the results: (1) past genetic bottlenecks and (2) genetic divergence as a by-product of local adaptations to different habitats. Regardless of the causes of allozymic differentiation, our results suggest that plans for artificial establishment or reestablishment of P. maguirei populations should use source populations within 1 km of the establishment site. This study emphasizes the potential use of data on population genetic structure for managing and monitoring rare species.     

Translocations and the Preservation of Allelic Diversity

Translocation is a tool commonly used for the conservation of threatened and endangered fish species. Despite extensive use, the biological implications of translocation remain poorly understood. Of particular interest is the effect of translocation on genetic variability. Maintenance of genetic variability in these "refuge" populations is assumed to be important for both short- and long-term success. We examined allozyme variability at 16 loci for western mosquitofish ( Gambusia affinis ) populations with known histories of introduction. Refuge populations had significantly lower levels of heterozygosity. Refuge populations also had considerably lower levels of allelic diversity than parental populations. All losses were of relatively rare alleles (frequency less than 0.1 in parental population). These losses were probably due to an undocumented bottleneck early in the introduction history. These results were surprising because the initial transplant involved 900 fish and because mosquitofish have numerous reproductive traits that should minimize the effects of bottlenecks on genetic diversity. A literature review revealed that genetic variability is often reduced in refuge populations and that such reductions typically involve the loss of alleles. We suggest that translocated populations be examined periodically for losses of genetic variability.     

Microsatellite Analysis of Population Structure in the Endangered Hawaiian Monk Seal

Abstract: The endangered Hawaiian monk seal breeds at six locations in the northwestern Hawaiian Islands. To determine whether significant genetic differentiation exists among these sites, we used microsatellite loci to examine the monk seal population structure at the five largest breeding colonies. Of 27 loci isolated from other seal species, only 3 were polymorphic in an initial screening of one individual from each breeding site. Only two alleles were found at each of these 3 loci in samples of 46–108 individuals. This extremely low variation is consistent with other measures of genetic variability in this species and is probably the result of a recent severe population bottleneck, combined with a long-term history of small population sizes. Although the smallest monk seal subpopulation in this study ( Kure Atoll) showed some evidence of heterozygote deficit, possibly indicative of inbreeding, the next smallest ( Pearl and Hermes Reef) had an apparent excess of heterozygous individuals. Genetic differentiation was detected between the two subpopulations at extreme ends of the range ( Kure and French Frigate Shoals). This trend was significant only at the microsatellite locus for which we had the largest sample size ( Hg6.3: R _ST = 0.206, p = 0.002; allelic goodness of fit G _h = 15.412, p < 0.005). French Frigate Shoals is the source population for translocated animals that have been released primarily at Kure Atoll. Differentiation between these sites consisted of allele frequency differences (with the same allele predominant in each location at all three loci), rather than the preservation of alternative alleles. Although the translocations have had positive demographic effects, we recommend continued genetic monitoring of both the source and recipient populations because translocated individuals are now entering the breeding population.     

Mature and old-growth riparian forests: structure, dynamics, and effects on Adirondack stream habitats.

Riparian forests regulate linkages between terrestrial and aquatic ecosystems, yet relationships among riparian forest development, stand structure, and stream habitats are poorly understood in many temperate deciduous forest systems. Our research has (1) described structural attributes associated with old-growth riparian forests and (2) assessed linkages between these characteristics and in-stream habitat structure. The 19 study sites were located along predominantly first- and second-order streams in northern hardwood-conifer forests in the Adirondack Mountains of New York (U.S.A.). Sites were classified as mature forest (6 sites), mature with remnant old-growth trees (3 sites), and old-growth (10 sites). Forest-structure attributes were measured over stream channels and at varying distances from each bank. In-stream habitat features such as large woody debris (LWD), pools, and boulders were measured in each stream reach. Forest structure was examined in relation to stand age using multivariate techniques, ANOVA, and linear regression. We investigated linkages between forest structure and stream characteristics using similar methods, preceded by information-theoretic modeling (AIC). Old-growth riparian forest structure is more complex than that found in mature forests and exhibits significantly greater accumulations of aboveground tree biomass, both living and dead. In-stream LWD volumes were significantly (alpha = 0.05) greater at old-growth sites (200 m3/ha) compared to mature sites (34 m3/ha) and were strongly related to the basal area of adjacent forests. In-stream large-log densities correlated strongly with debris-dam densities. AIC models that included large-log density, debris-dam density, boulder density, and bankfull width had the most support for predicting pool density. There were higher proportions of LWD-formed pools relative to boulder-formed pools at old-growth sites as compared to mature sites. Old-growth riparian forests provide in-stream habitat features that have not been widely recognized in eastern North America, representing a potential benefit from late-successional riparian forest management and conservation. Riparian management practices (including buffer delineation and restorative silvicultural approaches) that emphasize development and maintenance of late-successional characteristics are recommended where the associated in-stream effects are desired.     

Conserving alpha and beta diversity in wood-production landscapes

International demand for wood and other forest products continues to grow rapidly, and uncertainties remain about how animal communities will respond to intensifying resource extraction associated with woody bioenergy production. We examined changes in alpha and beta diversity of bats, bees, birds, and reptiles across wood production landscapes in the southeastern United States, a biodiversity hotspot that is one of the principal sources of woody biomass globally. We sampled across a spatial gradient of paired forest land-uses (representing pre and postharvest) that allowed us to evaluate biological community changes resulting from several types of biomass harvest. Short-rotation practices and residue removal following clearcuts were associated with reduced alpha diversity (−14.1 and −13.9 species, respectively) and lower beta diversity (i.e., Jaccard dissimilarity) between land-use pairs (0.46 and 0.50, respectively), whereas midrotation thinning increased alpha (+3.5 species) and beta diversity (0.59). Over the course of a stand rotation in a single location, biomass harvesting generally led to less biodiversity. Cross-taxa responses to resource extraction were poorly predicted by alpha diversity: correlations in responses between taxonomic groups were highly variable (−0.2 to 0.4) with large uncertainties. In contrast, beta diversity patterns were highly consistent and predictable across taxa, where correlations in responses between taxonomic groups were all positive (0.05–0.4) with more narrow uncertainties. Beta diversity may, therefore, be a more reliable and information-rich indicator than alpha diversity in understanding animal community response to landscape change. Patterns in beta diversity were primarily driven by turnover instead of species loss or gain, indicating that wood extraction generates habitats that support different biological communities.