Daphne: a new multimetric benthic index for the quality assessment of marine coastal environment in the Northern Adriatic Sea

A new benthic index, named Daphne, is proposed for the Northern Adriatic coastal area, near the Po river delta. It is based on six characteristics of the community that do not require in-depth taxonomic expertise: number of mollusc species, % of bivalves, % of polychaetes, abundance of the opportunistic species Corbula gibba, % of amphipods and number of ‘typical mollusc species’ that are individuated by multivariate analysis. The application of the index in selected stations along a gradient of decreasing disturbance shows that it is simple to use in regular monitoring campaigns and that the results are consistent with environmental quality data in the special conditions of this area subjected to considerable river runoff. The index can be used in addition and as a complement to more widespread indices (such as M-AMBI); a comparison of the two indices performance is discussed.     

Identification and Choice of a Biological Indicator for the Study of the Contamination of a River Environment by Heavy Metals

Biological indicators are efficient tools for establishing pollution levels in a given environment (Phillips, 1980). In this study the organisms used are endowed with the ability to accumulate heavy metals in the river ecosystem, where a biological indicator may be preferable to direct analysis of water samples as a means of monitoring pollution (Popham and D'Auria, 1981). Further, biological indicators provide estimates of the average level of pollution over a given period of time, and can discriminate a given pollutant present in water on the basis of its biological availability. The selection of a suitable organism, however, should fulfil other requirements, thus it must be sedentary, abundant in various environments and longeval. In the Po river a bivalve mollusc (Unio elongatulus) and some macrophytes (Potamogeton crispus, Lagarosiphon major, Miriophyllum verticillatum, Phragmitescornrnunis), known for their bio-accumulative properties (Ravera, 1966, 1973) have been identified as possible biological indicators of heavy metals (Pb, Cd, Cu, Zn, Ni, Co, Cr, Mn, Fe).     

Effect of Pollution On the Occurrence, Distribution and Sulphur Transformation Ability of the Thiobacilli in the River Ganga

The occurrence, distribution and nature of ambient thiobacilli along with their ability to oxidize different sulphur species under simulated natural and in vitro culture conditions were studied in the polluted and unpolluted sites of the River Ganga.

Thiobacillus thioparus, T. thiooxidans and T. denitrificans were isolated from the river water. the former two occurred in both polluted and unpolluted sites, while T. denitrificans occurred in polluted areas only. the paper pulp mill effluent discharge area contained the highest population of T. thioparus. the sewage drainage area showed relatively higher populations of T. thiooxidans and T. denitrificans.

The present study revealed that only biological oxidation of either thiosulphate or elemental sulphur occurred in the river water. All the thiobacilli screened oxidized thiosulphate, and three-fourths of them oxidized elemental sulphur. Some strains were found to be very good acidifiers. in spite of such acidification by the ambient thiobacilli, the pH of the river water remained alkaline. the specific rates of thiosulphate (0.18 -0.51 μMmolh^-1 mg^-1 cell) and sulphur (1.3 - 6.2 Normality day^-1 mg^-1 biomass) oxidations under simulated natural condition were found to be higher in polluted areas when compared with the unpolluted one (sulphur: 0.8 - 1.0 Normality day^-1 mg^-1).

Further, addition of thiouslphate or elemental sulphur in the river water in simulated in vitro condition resulted in the increase of respective oxidation rates. the variations in the natae of pollutants discharged into the river water influenced the oxidation rate of thiosulphate or sulphur.     

Bioaerosolization behavior along sewage sludge biostabilization

• Aerosolization behavior during a lab-scale sludge biostabilization was determined. • Many pathogenic species were identified to be preferentially aerosolized. • Bioaerosol concentration along the biostabilization ranged from 160 to 1440 cell/m³. • Sludge aerosolization behavior was different with that of other biowaste. Biostabilization is a cost-effective method for the beneficial utilization of sewage sludge. However, during the operation of sludge biostabilization, some microbial species could be released into the atmospheric environment from the solid-phase of sludge easily and present a high risk to human health. This study aimed to evaluate the risk of bioaerosol during sludge biostabilization. We found a total of nine bacterial phyla, one archaeal phylum, and two fungal phyla in the bioaerosol samples. Among them, Proteobacteria, Actinobacteria, Bacteroidetes, and Ascomycota were the dominant phyla. In addition, the bioaerosolization indexes (BI) of prokaryotic phyla and fungal phyla ranged 0–45 and 0–487, respectively. Massilia, Pseudarthrobacter, Pseudomonas, Tremellales spp., and Fusarium were the preferentially aerosolized microbial genera with maximum bioaerosolization indexes of 19962, 10360, 1802, 3055, and 7398. The bioaerosol concentration during the biostabilization ranged from 160 to 1440 cell/m³, and we identified species such as Stenotrophomonas rhizophila and Fusarium graminerum with high bioaerosolization indexes that could be threats to human health. Euryachaeota, which belongs to archaeal phyla, had the highest biostabilization index in our study. We also found that Pseudarthrobacter was the easiest to aerosolize during the sludge biostabilization process.     

Tree species diversity and its relationship to stand parameters and geomorphology features in the eastern Black Sea region forests of Turkey

We studied the effects of stand parameters (crown closure, basal area, stand volume, age, mean stand diameter number of trees, and heterogeneity index) and geomorphology features (elevation, aspect and slope) on tree species diversity in an example of untreated natural mixed forest stands in the eastern Black Sea region of Turkey. Tree species diversity and basal area heterogeneity in forest ecosystems are quantified using the Shannon-Weaver and Simpson indices. The relationship between tree species diversity basal area heterogeneity stand parameters and geomorphology features are examined using regression analysis. Our work revealed that the relationship between tree species diversity and stand parameters is loose with a correlation coefficient between 0.02 and 0.70. The correlation of basal area heterogeneity with stand parameters fluctuated between 0.004 and 0.77 (R2). According to our results, stands with higher tree species diversity are characterised by higher mean stand diameter number of diameter classes, basal area and lower homogeneity index value. Considering the effect of geomorphology features on tree species or basal area heterogeneity we found that all investigated relationships are loose with R < or = 0.24. A significant correlation was detected only between tree species diversity and aspect. Future work is required to verify the detected trends in behaviour of tree species diversity if it is to estimate from the usual forest stand parameters and topography characteristics.     

Bioaccumulation of platinum group metals on some fish species ( Oreochromis niloticus,Penaeus laspisulcates,Scylla serrate,Galaxias brevipinnis and Mollusc ) in the Pra estuary of Ghana

Catalytic converters have been designed to solve the problem of pollution from automobiles. However, recent studies have shown that the platinum group metals (PGMs) that are used in the design are being deposited alongside highways. The objective of this study was to measure the levels of PGMs that bioaccumulate in Oreochromis niloticus, Penaeus laspisulcates, Scylla serrate, Galaxias brevipinnis and Mollusc in the river Pra estuary along a major highway in Ghana. Chemical analysis using neutron activation analysis showed accumulation of the PGMs in all the biota species analysed. The S. serrate and mollusc showed higher accumulation than the other species. The mollusc and the other fish species in the estuary are consumed in Ghana, and therefore there is the need to educate the population on the effect of the PGMs on their health.     

Territory size and defendability in primates

Mitani and Rodman (1979) showed that a simple measure of the defendability of the range area could differentiate fairly successfully between territorial and non-territorial species of primates. Their analysis has, however, been much criticised on the grounds that it considered only the day journey length and the diameter of the range area. We develop a number of more realistic indices of territory defendability that take into account both the length of the boundary to be defended and the detection distance as well as linear measures of range size. These indices (a) discriminate between territorial and non-territorial species more successfully than the Mitani-Rodman index and (b) allow the results to be extended to species which do not forage in cohesive groups. However, our results suggest that the Mitani-Rodman analysis was in many ways correct.     

Catastrophic Decline in Mollusc Diversity in Eastern Tasmania and Its Concurrence with Shellfish Fisheries

Abstract:  We used historical patterns of deposition of mollusc shells to infer changes to inshore benthic assemblages in the southeastern Tasmanian region over the past 120 years. We identified and counted shells in slices embedded within 1m long ²¹⁰Pb-dated sediment cores were collected at 13 sites in water depths of 8–16 m. Declines in mollusc species richness and shell production occurred during the past century at all sites studied, with a mean decline per 5-cm sediment slice from 21 species in 1890 to 7 species in 1990 and in shell abundance from 150 to 30 individuals over the same period. The time course of decline notably corresponded with the history of the scallop dredge fishery, presumably either because scallop dredging caused general declines in populations of mollusc species or because other factors caused a catastrophic regional decline in molluscs that included scallops. As a consequence, the fishery was forced to close. Of major concern is that losses had not previously been recognized but extended throughout the 100-km coastal span of the study. Given that fishing and other anthropogenic impacts, as well as a lack of observational data, are virtually ubiquitous for the coastal zone, major recent losses in mollusc biodiversity may be globally widespread but have gone unnoticed.     

Conservation Assessment of Southern South American Freshwater Ecoregions on the Basis of the Distribution and Genetic Diversity of Crabs from the Genus Aegla

Abstract:  We assessed the conservation priority of 18 freshwater ecoregions in southern South America on the basis of Aegla (genus of freshwater crabs) genetic diversity and distribution. Geographical distributions for 66 Aegla species were taken from the literature and plotted against ecoregions and main river basins of southern South America. Species richness and number of threatened and endemic species were calculated for each area. To assess taxonomic and phylogenetic diversity, we generated a molecular phylogeny based on DNA sequences for one nuclear (28S) and 4 mitochondrial (12S, 16S, COI, and COII) genes. All species richness and phylogenetic methods agreed, to a large extent, in their rankings of the importance of conservation areas, as indicated by the Spearman's rank correlation coefficient ( p < 0.01); nonetheless, some of the lowest correlations were observed between taxonomic and phylogenetic diversity indices. The 5 ecoregions of the Laguna dos Patos Basin (Eastern Brazil), Central Chile, South Brazilian Coast, Chilean Lakes, and Subtropical Potamic Axis (northern Argentina and southern Uruguay and Paraguay) had the highest biodiversity scores. Conservation of these regions will preserve the largest number of species and the greatest amount of genetic diversity within the South American freshwater Aegla fauna. Biodiversity across rivers and within areas was heterogeneously distributed in the ecoregions of Upper Paraná, Ribeira do Iguape, Upper Uruguay, and South Brazilian Coast (i.e., one river showed significantly more biodiversity than any other river from the same ecoregion), but homogeneously distributed in the other ecoregions. Hence, conservation plans in the former regions will potentially require less effort than plans in the latter regions.     

Impact of fishing methods on conservation of ichthyofauna of river Relli in Darjeeling Himalaya of West Bengal

Impact of fishing methods and gears used on fish faunal diversity in spring-fed torrential river Relli in Darjeeling hill area of West Bengal was investigated in the present study. The fish species available in the river provide nutrition and recreation (rarely income generating) fora large number of people residing along the river bank and nearby villages and towns. The fishing methods observed therein have been categorized as, i) Scientific fishing methods, that is, collection of required number and size of fish so that sufficient population of fish remains balanced in the nature. ii) Unscientific fishing methods, that is, indiscriminate killing of large number of fish which adversely affect the water quality of rivers. Ten types of fishing methods are practiced in this area, for example, diversion of river channel, cast netting, scoop netting, angling, fish spearing, rock striking or hammering, dynamiting, electric fishing, river poisoning and traps utilized. Over the years uncontrolled and often indiscriminate fishing in the unmanaged hill-stream has resulted in a sharp decline in fish resources. The study gives a clear picture on the anthropogenic pressure on the river Relli and provides baseline data which may be helpful for conservation and management of the fish species and also formulating new fishery policy.     

Arsenic species in the well water and sediments of the blackfoot disease area in Taiwan

The blackfoot disease (BFD) observed in southwestern Taiwan is due to drinking high arsenic concentrations in well water. This paper presents some results concerning the distributions of arsenic species in water and sediments collected in the BFD (well, river and coastal) area and the background (lake and ocean) area for comparison. The results show that the concentrations of arsenate (870 ± 26 ug/L) and arsenite (70.2 ± 2.6 ug/ L) in well waters, and the contents of arsenic (1640 ug/g) with high percentage of easily reducible (Fe and Mn oxides, 91.7%) and exchangeable and carbonate (4.6%) phases in well sediments were much higher than those in river, lake and coastal samples. Low arsenic (3.46–31.8 ug/g) with high percentages (73.8–97.3%) of detritus and minerals phase with low percentages (0.4–9.8%) of total carbonate and exchangeable phases were found in the river and coastal samples in the BFD area as well as the lake and ocean samples in background area. It might suggest that the higher concentrations of toxic As(III) in well water and arsenic with higher values of easily reducible, carbonate and exchangeable phases in the well sediments, combined with the higher values of dissolved organic carbon, humic and fulvic acids and aromatic carbon as well as the higher fluorescence indensity in the well water are the key factors to cause the BFD in Taiwan.     

Evaluation of sampling methods for the estimation of structural indices in forest stands

The paper is about the accurate (i.e. unbiased and precise) and efficient estimation of structural indices in forest stands. We present SIAFOR, a computer programme for the calculation of four nearest-neighbour indices, which describe the spatial arrangement of tree positions, the distribution pattern of species, and the size differentiation between trees. The study uses SIAFOR as a sampling simulator in eight completely stem-mapped forest stands of varying area and structural complexity. We statistically evaluate two sample types (distance and plot sampling), comparing sampling error, bias and minimum sample size for index estimation. We introduce the concepts of measurement expansion factor (MEF) and design expansion factor (DEF) for the technical evaluation of sample type efficiency (optimal sample type). Results indicate that sampling error can reach high levels and that minimum sample sizes for index estimation often amply exceed the limit of 20% of tree density or 20 trees per species per hectare, that we set as the highest feasible sample size in normal situations. We found clear feasibility limits (in terms of minimal tree densities and reachable accuracy levels) for the estimation of all investigated indices. Generally, equal or higher sample sizes are needed for plot sampling than for distance sampling to reach equal accuracy levels. Nevertheless, plot sampling resulted more efficient for the estimation of tree size differentiation at low to medium accuracy levels. For all other investigated indices distance sampling resulted more efficient than plot sampling. Minimum sample size increases with accuracy and is negatively correlated with tree density. At a given accuracy level minimum sample size is highest for the estimation of relative mingling and lowest for tree size differentiation; furthermore it is generally lower in large stands than in small ones. Because of the consistency of our conclusions in all of the investigated stands, we think they apply in most stands of similar area (between 1 and 10 ha) and species diversity (not more than four species).     

The Distribution and Impacts of Dioxins and Polychlorinated Biphenyls in the Taiwan Er-Jen River

The distribution and impacts of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/DFs) and polychlorinated biphenyls (PCBs) in the Taiwan Er-Jen River were investigated by monitoring fish distribution and measuring PCDD/DFs and PCBs levels in sediment and fish samples. Most of the fish collected are pollution-resistant species such as Oreochromis spp, Liza macrolepsis, Channa spp and Megalops cyprinoides. the most polluted river sections are in the upstream where large amount of waste effluents from households, livestock rearing and nearby dumping sites were discharged into the river, and the lower reaches of the river where metal recovery activities including open burning of waste electrical wire/scrap occurred. Sediment samples collected near the burning site show 2,3,7,8-TCDD toxicity equivalents (TEQ) ranging from 0.014 to 14.2 ng g^-1 by PCDD/DFs and from 0.015 to 1.03 ng g^-1 by coplanar PCBs (Co-PCBs). the fish samples show TEQ ranging from 0.029 to 0.615 ng g^-1 by PCDD/DFs and from 0.012 to 0.12 ng g^-1 by Co-PCBs. Possible PCDD/DFs sources are discharged PCBs, open burning of waste wire/scrap, and pentachlorophenol. the consumption of these fish will cause an average intake of 54 pg kg^-1 d^-1 TEQ. the prevention of direct discharge of livestock and the dumping of waste effuents into River Er-Jen as well as the control of metal recovery activities appears to be the first step toward the restoration of River Er-Jen.     

A link between ecological diversity indices and measures of biodiversity

The practice of environmental planning and protection frequently necessitates the quantification of ecological diversity. Traditional ‘ecological diversity indices’ are based on the abundances of species present. However, such indices are insensitive to taxonomic or similar differences. With equal species abundances they measure the species richness (species number) only. Conversely, so-called ‘biodiversity indices’ are based on species differences, but are insensitive to the abundance conditions. The quadratic entropy index is the only ecological diversity index, the value of which reflects both the differences ‘and’ abundances of the species. When a species list is given without abundance data, then, using the quadratic entropy index and postulating equal abundances, one gets the only biodiversity index derived from a traditional ecological index of diversity. Its extensive form is identical with the sum of differences or distances between the species present. This index trivially satisfies set monotonicity, an important property for biodiversity indices.     

紫茎泽兰和飞机草在广西的入侵生境植物多样性分析

对紫茎泽兰（Eupatorium adenophorum）和飞机草（Eupatorium odoratum）在广西入侵生境的植物多样性进行了研究。结果表明：在紫茎泽兰、飞机草发生危害的生境,Simpson指数、Shannon-Wiener指数、Pielou均匀度指数均比没有紫茎泽兰、飞机草危害的生境低。在紫茎泽兰样方中,有紫茎泽兰入侵的生境其上述各指数分别比没有紫茎泽兰入侵的低43.65%、55.13%、55.68%。而在飞机草样方中,有飞机草入侵的生境其上述各指数分别比没有飞机草入侵的低33.55%、37.78%、17.98%。说明紫茎泽兰和飞机草对入侵生境的植物多样性影响较大。     

Bioaerosol emissions variations in large-scale landfill region and their health risk impacts

● The airborne bacteria in landfills were 4–50 times higher than fungi. ● Bioaerosols released from the working area would pose risk to on-site workers. ● The safe distance for the working area should be set as 80 m. Landfills are widely complained about due to the long-term odor and landfill gas emissions for local residents, while the bioaerosols are always neglected as another threat to on-site workers. In this study, bioaerosols samples were collected from the typical operation scenes in the large-scale modern landfill, and the emission levels of airborne bacteria, pathogenic species, and fungi were quantified and co-related. The corresponding exposure risks were assessed based on the average daily dose via inhalation and skin contact. It was found that the levels of culturable bacteria and fungi in all landfill samples were around 33–22778 CFU/m³ and 8–450 CFU/m³, and the active-working landfill area and the covered area were the maximum and minimum emission sources, respectively, meaning that the bioaerosols were mainly released from the areas related with the fresh waste operation. Acinetobacter sp., Massilia sp., Methylobacterium-Methylorubrum sp. and Noviherbaspirillum sp. were the main bacterial populations, with a percentage of 42.56%, 89.82%, 70.24% and 30.20% respectively in total bioaerosols measured. With regards to the health risk, the health risks via inhalation were the main potential risks, with four orders of magnitude higher than that of skin contact. Active-working area showed the critical point for non-carcinogenic risks, with a hazard quotient of 1.68, where 80 m protection distance is recommended for on-site worker protection, plus more careful protection measures.     

Using simulation to explore the functional relationships of terrestrial carnivore population indices

Population indices based on visits to detection stations commonly are used to monitor wildlife populations. Inferences about populations are based on 1 of 2 measures: (1) change in the proportion of stations visited at least once or (2) change in the cumulative number of visits by unique individuals. The functional relationships between index responses and population density is poorly understood and can lead to misinterpretation of index data when an incorrect functional relationship (e.g. linear) is assumed. We created a flexible simulation environment to study the response of detection-based population indices under a wide variety of conditions meant to reflect species life history and study design. Proportional indices exhibited non-linear saturating responses to changes in population density while cumulative indices responded linearly. Shapes of responses were functions of home range sizes, individual detection probabilities, and spatial arrangement of animals and sampling stations. Non-linear relationships of proportional indices lead to under-estimation of mean population density when data are aggregated from multiple detection stations deployed in a heterogeneous landscape. Cumulative indices have significant statistical advantages over proportional indices including smaller sample sizes required to detect density change, linearity, consistent index responses across a wide range of densities, and ability to aggregate data to meet minimum sample size requirements. Our simulation provides a flexible tool for the interpretation of station-based population indices.     

不同干扰下阿拉善荒漠啮齿动物群落格局的变动特征

干扰广泛被认为是影响物种多样性变化的最主要的因素。近年来,物种多样性对干扰的响应是生态学家关注和研究的热点问题之一。2002-2011年,在内蒙古阿拉善荒漠区对人为不同利用（干扰）方式形成的禁牧、轮牧、过牧和开垦4种不同区域中,通过对啮齿动物群落的物种数、物种总捕获率、Shannon-Wiener多样性指数和Pielou均匀性指数等4个变量的时间序列资料的比较,分析了这些变量的年间变动特点及在不同干扰条件下的变动规律,并对不同干扰区各变量的趋势进行分析,探讨啮齿动物群落对不同干扰过程的响应。结果表明：4个变量的最高值均出现在受中等干扰的轮牧区中,物种总捕获率2003年出现了各区的第1个高峰,总捕获率分别为过牧区10.75%、轮牧区19.60%、禁牧区11.20%、开垦区10.55%;2008年出现第2个高峰,4个区物种总捕获率均达到了各区的最高峰,捕获率分别为过牧区29.60%、轮牧区34.15%、禁牧区14.20%、开垦区27.10%。过牧区与轮牧区群落物种总捕获率、Shannon-Wiener指数和Pielou均匀性指数显著相关（p〈0.05）,变动规律相似。过牧区与轮牧区、禁牧区与过牧区、轮牧区与禁牧区之间的物种总捕获率呈极显著正相关（p〈0.01）。过牧区与轮牧区相似度较高（I=0.8568）;过牧区Shannon-Wiener指数表现为有显著的下降趋势（Y=-0.142 lnt＋1.487,F=6.320,p＜0.05）,表明随着过牧时间的积累,对生境的干扰逐步加重,啮齿动物群落的多样性会逐渐降低。     

New multidimensional functional diversity indices for a multifaceted framework in functional ecology

Functional diversity is increasingly identified as an important driver of ecosystem functioning. Various indices have been proposed to measure the functional diversity of a community, but there is still no consensus on which are most suitable. Indeed, none of the existing indices meets all the criteria required for general use. The main criteria are that they must be designed to deal with several traits, take into account abundances, and measure all the facets of functional diversity. Here we propose three indices to quantify each facet of functional diversity for a community with species distributed in a multidimensional functional space: functional richness (volume of the functional space occupied by the community), functional evenness (regularity of the distribution of abundance in this volume), and functional divergence (divergence in the distribution of abundance in this volume). Functional richness is estimated using the existing convex hull volume index. The new functional evenness index is based on the minimum spanning tree which links all the species in the multidimensional functional space. Then this new index quantifies the regularity with which species abundances are distributed along the spanning tree. Functional divergence is measured using a novel index which quantifies how species diverge in their distances (weighted by their abundance) from the center of gravity in the functional space. We show that none of the indices meets all the criteria required for a functional diversity index, but instead we show that the set of three complementary indices meets these criteria. Through simulations of artificial data sets, we demonstrate that functional divergence and functional evenness are independent of species richness and that the three functional diversity indices are independent of each other. Overall, our study suggests that decomposition of functional diversity into its three primary components provides a meaningful framework for its quantification and for the classification of existing functional diversity indices. This decomposition has the potential to shed light on the role of biodiversity on ecosystem functioning and on the influence of biotic and abiotic filters on the structure of species communities. Finally, we propose a general framework for applying these three functional diversity indices.     

冀北山区森林群落草本多样性及其与地形关系研究

通过野外调查取样,应用Menhinick丰富度指数、Simpson指数、Shannon-Wiener指数和Pielou均匀度指数研究了冀北山区12种典型森林群落内的草本植物多样性规律,并采用典范对应分析（CCA）方法研究其分布与地形的关系。结果表明：不同的群落类型草本植物的组成和多样性指数不同,山杨（Populus davidiana）纯林的种数最多为34种,黑桦（Betula dahurica Pall）纯林的种数最少为19种,其Simpson指数、Shannon-Wiener指数最高,分别为0.927 3和2.879 6;在1 200～1 700 m之间,随海拔升高物种多样性指数、均匀度指数和丰富度指数呈正相关性,但没有线性上升的趋势关系;选取的地形因子对样点草本的影响程度大小为：坡向〉海拔〉坡度〉坡位〉坡形,坡向是样点草本植物空间差异的最主要地形制约因子,环境解释率为98.7%,证明排序可信。