Relationships between fecal indicators and pathogenic microorganisms in a tropical lagoon in Rio de Janeiro, Brazil

Rodrigo de Freitas Lagoon is an urban ecosystem undergoing accelerated degradation, therefore selected as a model for microbiological quality studies of tropical lagoons. The aim of this study was to evaluate the abundance and the spatial distribution of fecal pollution indicators and pathogenic microorganisms in the lagoon. The relationships between microbial groups and abiotic measurements were also determined to evaluate the influence of environmental conditions on bacterial distribution and to identify the capability of coliforms and Enterococcus to predict the occurrence of Vibrio, Staphylococcus aureus, and Salmonella. Surface water samples were collected monthly, from December 1999 to October 2000. Analyses were performed by traditional culture techniques. A uniform spatial distribution was observed for all bacterial groups. The fecal pollution indicators occurred in low abundances while potentially pathogenic microorganisms were consistently found. Therefore, our study supported the use of counts of coliforms and Enterococcus to indicate only recent fecal contamination.     

Monitoring E. coli and total coliforms in natural spring water as related to recreational mountain areas

Natural spring water has unique properties, as it is rich in minerals that are considered to be beneficial to human health. A survey of the microbiological quality of natural spring water was conducted to assess possible risks from the consumption of the water by visitors in recreational mountain areas located in Seoul, South Korea. The densities of total coliforms and Escherichia coli were measured during the spring and the summer of 2002 to investigate the presence of coliform bacteria in the drinking spring waters. Total coliforms were detected in all samples and the mean density of total coliforms was up to a maximum of 228 CFU/mL. Detectable E. coli was found in 78% of all samples and the mean densities of E. coli varied from a minimum of 0 CFU/mL to a maximum of 15 CFU/mL in all samples. Malfunctioning septic systems and wildlife population appear to be the main source of E. coli contamination. Presence of E. coli in natural spring water indicates potential adverse health effects for individuals or populations exposed to this water. The fecal contaminated spring water may present an unacceptable risk to humans if it is used as raw drinking water.     

Physical and Sanitary Quality of Hand-Dug Well Water from Oil-Producing Area of Nigeria

The physical (pH, Dissolved Solids, Dissolved Oxygen, conductivity, water depth temperature) and bacteriological (Total coliforms, Faecal coliforms) characteristics of 22 hand-dug wells in oil-rich Niger Delta of Nigeria were investigated. All coliforms counts (Log₁₀ MPN/100 ml) varied from well to well ranging from 0 to 6.0 although faecal coliform counts were markedly lower (0–3.5 vs 1.0–6.0). When both seasons were compared, faecal coliform counts were significantly higher (t test; P < 0.05) during the wet season whereas no significant difference was observed in respect of total coliforms. Unlike the total coliforms, faecal coliform counts increased in wells close to septic tanks during the wet season. Although a declining trend was observed during the wet season, the values of the physical parameters were within WHO limits. The pH was slightly acidic (Mean ± SD: dry season, 6.04 ± 0.66; wet, 6.43 ± 0.62) and may be attributed to emissions from gas flaring and petroleum refining activities, which is common in the area. While the total coliform counts reflected the unsanitary habits of the well users, the detection of faecal coliforms exceeding recommended numbers in 63% of the wells render them unfit for domestic use. The public health implication is obvious considering the increasing number of people using the wells due to the rapid urbanization of the oil-rich region.     

Applicability of universal Bacteroidales genetic marker for microbial monitoring of drinking water sources in comparison to conventional indicators

Water quality monitoring is essential for the provision of safe drinking water. In this study, we compared a selection of fecal indicators with universal Bacteroidales genetic marker to identify fecal pollution of a variety of drinking water sources. A total of 60 samples were collected from water sources. The microbiological parameters included total coliforms, fecal coliforms, Escherichia coli and fecal streptococci as the fecal indicator bacteria (FIB), Clostridium perfringens and H₂S bacteria as alternative indicators, universal Bacteroidales genetic marker as a promising alternative fecal indicator, and Salmonella spp., Shigella spp., and E. coli O157 as pathogenic bacteria. From 60 samples analyzed, Bacteroidales was the most frequently detected indicator followed by total coliforms. However, the Bacteroidales assay failed to detect the marker in nine samples positive for FIB and other alternative indicators. The results of our study showed that the absence of Bacteroidales is not necessarily an evidence of fecal and pathogenic bacteria absence and may be unable to ensure the safety of the water. Further research, however, is required for a better understanding of the use of a Bacteroidales genetic marker as an indicator in water quality monitoring programs.     

An assessment of fecal indicator and other bacteria from an urbanized coastal lagoon in the City of Los Angeles, California, USA

A study was performed in Del Rey Lagoon, City of Los Angeles, to determine if the lagoon was as a source or sink for fecal indicator bacteria (FIB: total coliforms, Escherichia coli, enterococci) and to screen for the presence of other potentially pathogenic bacteria. The lagoon receives tidal flows from the adjacent Ballona Estuary whose water usually is contaminated with FIB originating from the highly urbanized Ballona Creek Watershed. During 16 sampling events from February 2008 through March 2009, replicate water samples (n?=?3) were collected 1 h prior to the high tide and 1 h prior to the following low tide. FIB concentrations were measured by the defined substrate method (IDEXX, Westbrook, Me) followed by culturing of bacterial isolates sampled from positive IDEXX Quanti-Tray wells and were identified using the Vitek 2 Compact (bioMérieux, Durham, NC). Mean concentrations of FIB often differed by an order of magnitude from flood to ebb flow conditions. The lagoon tended to act as a sink for total coliforms based on the ratio of mean flood to ebb densities (R _F/E) >1.0 during 56 % of the sampling events and during ebb flows, as a source for E. coli and enterococci (R _F/E <1.69 % of events). Approximately 54 species were identified from 277 isolates cultured from the IDEXX Quanti-Trays. Of these, 54 % were species known to include pathogenic strains that can be naturally occurring, introduced in runoff, or originated from other sources. Diversity and cluster analyses indicated a dynamic assemblage that changes in species composition with day-to-day fluctuations as well as tidal action. The concept of monitoring the lagoon and estuary as a sentinel habitat for pathogenic assemblages is discussed.     

Faecal Coliform Bacteria in Febros River (Northwest Portugal): Temporal Variation, Correlation with Water Parameters, and Species Identification

Febros river water was sampled weekly, during 35 successive weeks, and analyzed for microbiological (total coliforms, faecal coliforms, faecal streptococci and enterococci) and chemical-physical (ammonia and temperature) parameters. All microbiological parameters were highly correlated with each other and with ammonia, suggesting that the simultaneous determination of all variables currently in use in the evaluation of the microbiological quality of waters is probably redundant, and could be simplified, and that ammonia should be tested as a sentinel parameter of the microbiological pollution load of Febros river. From the strains isolated from positive tubes of the faecal coliforms test (multiple tube fermentation technique) and retested in this assay, Escherichia coli, Klebsiella oxytoca and Klebsiella pneumoniae subsp. pneumoniae strains were positive, indicating that the faecal coliforms test is not totally specific for Escherichia coli, and can detect other bacteria. Considering that these Klebsiella spp. are not necessarily of faecal origin, it was concluded that the faecal coliforms test can overestimate true faecal pollution. From the strains isolated from positive tubes of the faecal coliforms procedure, only Escherichia coli strains were clearly positive in the β-D-glucuronidase test. All other species were negative or very weakly positive, suggesting that the assay of the β-D-glucuronidase activity is less prone to false positives than the faecal coliforms test in the quantification of Escherichia coli in environmental waters.     

Assessment of ground water quality for drinking purpose, District Nainital, Uttarakhand, India

The ground water quality of District Nainital (Uttarakhand, India) has been assessed to see the suitability of ground water for drinking and irrigation applications. This is a two-part series paper and this paper examines the suitability of ground water including spring water for drinking purposes. Forty ground water samples (including 28 spring samples) were collected during pre- and post-monsoon seasons and analyzed for various water quality constituents. The hydrochemical and bacteriological data was analyzed with reference to BIS and WHO standards and their hydrochemical facies were determined. The concentration of total dissolved solids exceeds the desirable limit of 500 mg/L in about 10% of the samples, alkalinity values exceed the desirable limit of 200 mg/L in about 30% of the samples, and total hardness values exceed the desirable limit of 300 mg/L in 15% of the samples. However, no sample crosses the maximum permissible limit for TDS, alkalinity, hardness, calcium, magnesium, chloride, sulfate, nitrate, and fluoride. The concentration of chloride, sulfate, nitrate, and fluoride are well within the desirable limit at all the locations. The bacteriological analysis of the samples does not show any sign of bacterial contamination in hand pump and tube-well water samples. However, in the case of spring water samples, six samples exceed the permissible limit of ten coliforms per 100 ml of sample. It is recommended that water drawn from such sources should be properly disinfected before being used for drinking and other domestic applications. Among the metal ions, the concentration of iron and lead exceeds the permissible limit at one location whereas the concentration of nickel exceeds the permissible limit in 60 and 32.5% of the samples during pre- and post-monsoon seasons, respectively. The grouping of samples according to their hydrochemical facies indicates that majority of the samples fall in Ca–Mg–HCO₃ hydrochemical facies.     

荧光法快速测定水中粪大肠菌群

为研究荧光法测定水中粪大肠菌群的适用性,在6家实验室使用荧光法对粪大肠菌群的标准菌株和实际水样进行测定,并与多管发酵法进行比对。结果表明:6家实验室对标准菌株的监测结果均在误差范围内,实验室内相对误差为-2. 75%～1. 71%,准确度较高;对3个不同浓度实际水样进行精密度测定,实验室内相对标准偏差分别为1. 30%～3. 93%、1. 94%～4. 72%、1. 88%～4. 54%,实验室间的相对标准偏差分别为1. 14%、1. 59%、1. 72%,精密度较高;用荧光法与多管发酵法同时测定实际水样,2种方法测试结果线性相关性良好且变化趋势相同,对测试数据进行t检验,2种方法测试结果无显著差异。     

Salmonella as an index of pollution of fresh-water environments

An environmental study was done to examine the prevalence of Salmonella in some aquatic environments of Jabalpur. Environmental factors in the fresh-water environment exert an influence on the distribution and behaviour of pathogenic bacteria. During the period from January 1991 to December 1992, a total number of 103 isolates of Salmonella were tested for their resistance against antibiotics. Among different isolates, Salmonella paratyphii showed 100% multiple resistance against antibiotics, i.e. Ampicillin, Carbenicillin, Cephalexin, Chloramphenicol, Gentamicin, Penicillin, Streptomycin, Tetracycline, Norfloxacine and Cloxacine. The density of Salmonella correlated with the densities of total coliforms, faecal coliforms and faecal streptococci. The increased survival, possible indigenous nature and behaviour of Salmonella further emphasize the need for direct enumeration, reformation of standards and health risk assessments for underdeveloped countries, where waterborne disease exert a horrible toll.     

Physicochemical and microbiological assessment of recreational and drinking waters

The present study was aimed to make an assessment of health risk due to pollution and human pathogenic bacteria associated with the recreational and drinking water sources in twin densely populated holy Indian cities Ayodhya and Faizabad. Though physicochemical studies revealed that the water available in the area is under recommended limits for human use, it is unsafe on account of poor microbiological quality of surface and ground water in the region. The most probable number (MPN) test results revealed the preponderance of ≥2,400 total coliforms (TC) (100 ml)^− 1 in river, pond, dug well and kund waters. Contrary to that, 94% tube wells, 32% hand pumps and 25% piped supply water were under safe limits having <3 TC (100 ml)^− 1. The shallow depth (~40 ft), water logging and presence of septic tanks in the near vicinity are the possible reasons of poor microbial quality of hand pump drinking water. The municipal supply water passes along sewage line where loose connections and/or cracks in pipe lead to mixing and contamination. The significant best quality of tube well water evident from the absence of TC could be attributed to the depth of well ≥150 ft and usually their location away from the habitation. A total of 263 bacteria from 186 water samples were isolated, and at least five genera of enteric bacteria from various water sources were identified morphologically and biochemically as Escherichia coli, Klebsiella sp., Enterobacter sp., Shigella sp. and Salmonella sp. The serotyping of 72 E. coli and 36 Salmonella sp. revealed 51 as E. coli O157 and 20 as Salmonella sp. The presence of enteric pathogens in water sources pose threat to human health and therefore call for immediate remedial measures.     

Seasonal and spatio-temporal distribution of faecal-indicator bacteria in Tyume River in the Eastern Cape Province, South Africa

We assessed the incidence of faecal-indicator bacteria in Tyume River over a 12-month period between August 2010 and July 2011. Total coliforms, faecal coliforms and enterococci were determined by the membrane filtration method. Total coliforms were detected in counts ranging from 2.1?×?10² to 3.4?×?10⁴?CFU/100 ml. Faecal coliform counts ranged from 1?×?10² to 1.6?×?10⁴?CFU/100 ml while enterococci counts were in the range of 3.3?×?10¹ to 5.1?×?10³?CFU/100 ml. Indicator bacteria counts increased from upstream to downstream sampling sites. Counts of indicator bacteria at all sites were significantly affected by seasonal changes. The bacteriological qualities of the river water were poor, exceeding the guideline of 200 CFU/100 ml and 33 CFU/100 ml for faecal coliforms and enterococci, respectively, for recreational water. Faecal coliform counts also exceeded the 1,000 CFU/100 ml guideline for water used in fresh produce irrigation. Microbial source tracking results showed that faecal pollution was predominantly of human origin during spring at all sampling sites. During other seasons, human faecal pollution was largely confined to midstream and downstream sampling sites. Generally, the presence of faecal-indicator bacteria in the river water samples suggests faecal pollution of this freshwater resource, raising the possibility of the presence of pathogenic microorganisms in the water and a threat to public health.     

Evaluating seasonal dynamics of bacterial communities in marine fish aquaculture: a preliminary study before applying phage therapy

The increasing problem of antibiotic resistance in common pathogenic bacteria and the concern about the spreading of antibiotics in the environment bring the need to find new methods to control fish pathogens. Phage therapy represents a potential alternative to antibiotics, but its use in aquaculture requires a detailed understanding of bacterial communities, namely of fish pathogenic bacteria. Therefore, in this study the seasonal dynamics of the overall bacterial communities, microbiological water quality and disease-causing bacteria were followed in a marine aquaculture system of Ria de Aveiro (Portugal). Analysis of the bacterial diversity of the water samples by denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene fragments indicates that the bacterial community structure varied seasonally, showing a higher complexity during the warm season. The diversity of the main fish pathogenic bacteria, assessed by DGGE targeting the Vibrio genus, showed lower seasonal variation, with new dominating populations appearing mainly in the spring. Bacterial indicators, faecal coliforms and enterococci, enumerated by the filter-membrane method, also varied seasonally. The fluorescent in situ hybridization (FISH) results showed that the specific groups of bacteria varied during the study period and that the non-indigenous Enterobactereaceae family was the most abundant group followed by Vibrio and Aeromonas. The seasonal variation detected in terms of density and structure of total and pathogenic bacterial communities demonstrates the need for a careful monitoring of water through the year in order to select the suitable phages to inactivate fish pathogenic bacteria. The spring season seems to be the critical time period when phage therapy should be applied.     

Heavy Metal Concentrations in Water, Sediments and Body Tissues of Red Worm (Tubifex spp.) Collected from Natural Habitats in Mumbai, India

Live feeds, especially Tubifex spp., which are collected from a wide variety of polluted habitats, are used by aquarium fish keepers in India. These habitats receive domestic sewage and industrial wastes from nearby residential and industrial areas. Reports of morbidity and mortality from aquarium fish culturists in and around Mumbai led to the present investigations on the ecology of these habitats with a view to assess the water quality, presence of heavy metals in the environment and their bioaccumulation in Tubifex worms, and to examine whether these habitats could be exploited to meet the demand of the industry. Six natural red worm (Tubifex spp.) collection centres in Mumbai and Thane districts of Maharashtra state in India constituting a major source of live Tubifex supply to aquarium fish industry were evaluated for pollution, heavy metal concentration in water, sediments and in the body tissues of Tubifex. Data revealed the presence of heavy metals in water and sediments at collection sites and bioaccumulation of cadmium, iron, lead, zinc and copper in body tissues of Tubifex worms. Cadmium ranged from 2.38 to 7.21 mg/kg, iron 671.9 to 5738 mg/kg, lead 14.95 to 33.49 mg/kg, zinc 60.20 to 166.60 mg/kg and copper 29.38 to 108.90 mg/kg of dry Tubifex worms. The study suggests that all the six collection sites are polluted and the red worms contaminated with heavy metals and hence, unfit for use in aquaria or feeding any variety of fish or crustaceans in the hatcheries.     

Characterization of microbial communities from coastal waters using microarrays

Molecular methods, including DNA probes, were used to identify and enumerate pathogenic Vibrio species in the Chesapeake Bay; our data indicated that Vibrio vulnificus exhibits seasonal fluctuations in number. Our work included a characterization of total microbial communities from the Bay; development of microarrays that identify and quantify the diversity of those communities; and observation of temporal changes in those communities. To identify members of the microbial community, we amplified the 16S rDNA gene from community DNA isolated from a biofilm sample collected from the Chesapeake Bay in February, 2000. The resultant 75 sequences were 95% or more similar to 7 species including two recently described Shewanella species, baltica and frigidimarina, that have not been previously isolated from the Chesapeake. When the genera of bacteria from biofilm after culturing are compared to those detected by subcloning amplified 16S fragments from community DNA, the cultured sample exhibited a strong bias. In oysters collected in February, the most common bacteria were previously unknown. Based on our 16S findings, we are developing microarrays to detect these and other microbial species in these estuarine communities. The microarrays will detect each species using four distinct loci, with the multiple loci serving as an internal control. The accuracy of the microarray will be measured using sentinel species such as Aeromonas species, Escherichia coli, and Vibrio vulnificus. Using microarrays, it should be possible to determine the annual fluctuations of bacterial species (culturable and non-culturable, pathogenic and non-pathogenic). The data may be applied to understanding patterns of environmental change; assessing the health of the Bay; and evaluating the risk of human illness associated with exposure to and ingestion of water and shellfish.     

Monitoring of Pathogenicity of Effluents from the UASB Based Sewage Treatment Plant

We researched the behavior of pathogenic microbes in a treated wastewater reuse system to acquire knowledge for establishing new standards for the reuse of treated wastewater. Based on the results that showed occasional growth of total coliforms but barely any growth of Escherichia coli in the supply tank, we found that the total coliform, which includes bacteria that also breed in the soil, etc., is not necessarily suitable as the index bacteria for indicating pollution by excrement. We also clarified that it is possible to decrease the heterotrophic plate count to a specified level in cases where combined residual chlorine is more than 0.3 mg/l, and that the standard value for residual chlorine should be set at 0.3 mg/l or more. At the same time, we found that applying sand filtration treatment to water used for toilet flushing, sprinkling and landscaping, and sand filtration treatment plus coagulation treatment to water for recreational use lowers the annual risk of infection by Cryptosporidium to less than 10⁻⁴. The standard for viruses must be examined in the future because Noroviruses were sometimes detected even in the reclaimed water, although we could not establish the standard at this time due to problems with the virus detection method.     

Groundwater quality and its suitability for domestic and agricultural use in Tondiar river basin,Tamil Nadu,India

Assessment of suitability of groundwater for domestic and agricultural purposes was carried out in Tondiar river basin, Tamil Nadu, India. The study area covers an area of 315 km² and lies in a semiarid region. Groundwater is the major source for domestic and agricultural activity in this area. Groundwater samples were collected from 45 wells during pre-monsoon and post-monsoon period in the year 2006. The water samples were analysed for physical and chemical characteristics. Suitability of groundwater for irrigation was evaluated based on salinity hazard, sodium percent, sodium adsorption ratio, residual sodium carbonate, US salinity diagram, Wilcox’s diagram, Kelly’s ratio and permeability index. Ca-HCO₃, mixed Ca–Mg–Cl and Na–Cl were the dominant groundwater types. High hardness and electrical conductivity in this area makes the groundwater unsuitable for drinking and agricultural purposes. Concentration of trace elements (Mn, Cu, Zn, Pb and Ni) did not exceed the permissible limit for drinking and agricultural purposes. Majority of the groundwater samples were unsuitable for domestic and agricultural purposes except for 31% and 36%, which were suitable for drinking and irrigation purposes, respectively.     

Mumbai harbour, India: gateway for introduction of marine organisms

Ships have been identified as one of the important vectors in the translocation of organisms from one bioregion to another leading to bioinvasion. In this context, harbours serve as a gateway for the introduction of alien species. Surveys were carried out in the vicinity of ports of Mumbai for macrobenthic fauna, zooplankton and hard substratum community on three different occasions during 2001–2002. The study shows that 14 polychaete species are recently introduced to this area. Mytilopsis sallei, a bivalve, which is an invasive species in the Indian context continued to be present but was restricted to enclosed docks, indicating preference for embayed water bodies. The polychaete Protula tubularia was abundant in the hard substratum community and is being reported as a possible ship-mediated introduction.     

Occurrence of Cryptosporidium oocysts in sewage effluents and correlation with microbial,chemical and physical water variables

Contaminated water are recognized as a potential source of Cryptosporidium oocysts. In Italy studies on the environmentalspread of the parasite are still scarce even if a high frequencyof serological responses could suggest high rates of endemic Cryptosporidium infections. In this investigation theoccurrence of the parasite in water samples from a municipalwastewater treatment plant was monitored with the aim to evaluatepossible correlation between oocysts and bacterial indicators,pathogens and physico-chemical parameters using a multivariateanalysis. Data collected showed high numbers of oocysts, with ahigh percentage of positive samples and a significant correlationwith pH, redox potential and total organic carbon. No correlationwas found between Cryptosporidium concentration and that of the other microrganisms. The results, through a probing statistical analysis, show that none of the selected microrganisms was a reliable predictor of the presence of theparasite.     

Influence of urbanization and tourist activities on the water quality of the Potrero de los Funes River (San Luis – Argentina)

A study of the water quality of the Potrero de los Funes River (San Luis – Argentina) was carried out in order to evaluate the possible effect of the anthropogenic activities on the river developed in the homonymous town. Samples were collected during the period March 2000–November 2005 at three selected sampling sites (RP₁, RP₂ and RP₃). Different physicochemical and bacteriological parameters (turbidity, pH, conductivity, suspended solids, alkalinity, potassium, sodium, calcium, magnesium, chlorides, nitrates, phosphates, sulphates, chemical oxygen demand (COD), 5-day biological oxygen demand (BOD₅), dissolved oxygen, total coliforms, Escherichia coli and total heterotrophic bacteria) were analysed according to the Standard Method for the Examination of Water and Wastewater. When comparing the values of total coliforms, E. coli, total heterotrophic bacteria, COD, BOD₅ and phosphates from the zone without anthropogenic influence (RP₁) and the urban zones (RP₂ and RP₃) an important variation in the parameters was observed. These results indicate that the urban activity produces a serious and negative effect on the water quality, thus constituting a sanitary risk and may have a major impact on the trophic status of the Potrero de los Funes dam. As case study, we report on the use of General Quality Index (GQI) to evaluate spatial and seasonal changes in the water quality of Potrero de los Funes River. Results revealed a significant degradation of the water quality at RP₂ and RP₃.     

江苏泰州城市霾天和沙尘天气溶胶中细菌群落结构特征研究

近年来,空气污染已成为长三角地区最关键的环境问题之一,气溶胶颗粒物(PM)是最主要的污染物之一.生物气溶胶作为颗粒物的重要组成部分,可能对空气质量和人体健康产生不利影响.利用高通量测序方法研究了江苏省泰州2019年11月至2020年1月期间发生沙尘和霾污染时生物气溶胶中细菌群落结构组成特征.结果表明:冬季沙尘天和霾天气...