RAPD扩增中商品酶体系对扩增产物的影响

随机选用了10条RAPD引物，采用3种商品TapDNA聚合酶体系，以5个不同物种的动植物总DNA为模板，进行RAPD扩增，实验发现，在对同一模板、采用同一引物进行的RAPD扩增中，仅仅因为使用了不同的商品TaqDNA聚合酶，获得的扩增产物差别极大；不同商品来源的PCR反应缓冲体系，对扩增产物也有一定影响，但相对较小，这说明，不同的商品酶体系对RAPD扩增产物影响很大，因此，影响RAPD扩增产物稳定性的一个关键因素是商品TaqDNA聚合酶本身；研究中前后一致地使用同一商品TaqDNA聚合酶体系，是成功进行RAPD分析的基础。     

利用RAPD技术分析兰属（Cymbidium）品种间的亲缘关系

本文利用RAPD技术来检测兰属13个品种间的亲缘关系。通过对55种10个碱基随机引物的筛选，其中4种引物能得到重复性、稳定性较高扩增产物，四种引物共扩增出93条多态性带，多态率为100％，根据RAPD标记进行邻体聚类分析，表明兰属各种间的亲缘关系与形态学分类结果不完全一致。实验结果认为RAPD技术可用于兰属植物的系统学研究。图2表3参13     

小麦抗禾谷类根线虫基因Rkn-mnl 的SCAR标记

将2个与小麦抗禾谷类根线虫基因Rkn-mnl紧密连锁的RAPD标记分别克隆、测序，根据测序结果设计两对特异PCR引物，通过SCAR-PCR反应条件优化，成功地将特异RAPD标记OPYl6-1065转换成了稳定的SCAR标记．图4参14     

基于RAPD技术检测不同烃链长度咪唑基离子液体对日本三角涡虫的遗传毒性

RAPD标记通常用于遗传作图、分类和系统发育研究,该技术也可用于检测DNA损伤或突变。本研究利用RAPD技术检测了4种不同烃链长度的咪唑基离子液体对日本三角涡虫(Dugesia japonica)的遗传毒性。在20条随机引物中共筛选出11条用于RAPD扩增,其中对照组共扩增出65条带。与对照组相比,离子液体处理组的RAPD图谱变化表现在条带亮度增强或减弱以及新带的出现和正常带的消失。各处理组多态性带及变异带的总数随离子液体烃链碳原子数增加而增加,而基因组模板稳定性则随离子液体烃链长度增加而降低,这说明咪唑基离子液体对涡虫有遗传毒性,且随着离子液体烃链长度增加其对涡虫的遗传毒性增强。同时研究结果也证明RAPD分析是一种检测环境污染物对动物DNA损伤的灵敏方法。     

添加NH4HCO3对亚麻生物脱胶的影响

研究了在亚麻生物脱胶过程中，向沤麻水中添加NH4HCO3后沤麻液中pH值、氨基氮、NH4^ 、果胶酶活性和细菌数量的变化规律．与天然沤麻相比，亚麻生物脱胶过程中添加NH4HCO3，缩短了沤麻周期，并提高了打成麻纤维质量．图2表3参9     

11个猕猴桃品种间的遗传多样性分析

利用随机扩增多态性DNA标记(RAPD)技术对采自四川省猕猴桃科研基地的11个猕猴桃品种进行了遗传多样性分析.通过引物筛选,从15个RAPD引物中扩增出135条带,其中100条为多态带,占74.07%.UPGMA聚类分析结果揭示了各品种间的亲缘关系.RAPD标记说明猕猴桃品种间遗传距离与地理分布有一定关系,地理位置较近的材料能聚在一起.分子标记可用于猕猴桃种质资源的分类、鉴定及良种选育.图2表2参15     

麻疯树AFLP体系的建立与优化

为了建立麻疯树AFLP(Amplified fragment length polymorphism)反应体系及筛选出扩增条带丰富的引物,以17份来自不同地方的麻疯树的幼嫩叶片为试材,对影响AFLP分析的关键因素包括DNA的提取质量和浓度、MseⅠ/EcoRⅠ酶切反应时间和浓度、银染方法等进行了研究,从64对引物组合中筛选出适合麻疯树的引物.结果表明,改良的CTAB方法提取的DNA质量比较好.建立了一种适于麻疯树AFLP的优化体系:模板DNA的用量为400 ng,酶切反应时间为3 h,筛选出T8对适合麻疯树扩增条带多、多态性强的引物.最终建立了适用于麻疯树的AFLP反应体系,并筛选出适合麻疯树的引物,为今后利用AFLP标记技术进行麻疯树的遗传多样性分析提供了标准化程序.图5表2参15     

5种化学品对丽斑麻蜥和日本鹌鹑的毒性研究

目前,在化学品生态风险评价体系中对爬行动物的毒性效应研究较少。本研究参考鸟类急性经口毒性试验建立了我国本土爬行动物——丽斑麻蜥(Eremias argus)的急性毒性测试方法,来评价化学品对爬行动物和鸟类的毒性效应之间的差异。选择异氰酸酯、1,2-苯并异噻唑-3-酮、2,4-二氯苯酚、苯并噻唑和二苯甲酮5种化学品分别对丽斑麻蜥进行暴露实验,并与鸟类模式物种——日本鹌鹑(Coturnix japonica)的急性毒性结果进行比较。结果发现异氰酸酯和苯并噻唑对丽斑麻蜥7 d的半数致死剂量(7 d-LD50)分别为125 mg·kg~(-1)和500 mg·kg~(-1),而对日本鹌鹑的7 d-LD50值分别为27 mg·kg~(-1)和37 mg·kg~(-1);1,2-苯并异噻唑-3-酮、2,4-二氯苯酚和二苯甲酮对丽斑麻蜥的7 d-LD50值分别为909 mg·kg~(-1)、787 mg·kg~(-1)和528 mg·kg~(-1),而对日本鹌鹑7 d-LD50值均大于剂量上限1 000 mg·kg~(-1)。结果表明,丽斑麻蜥和日本鹌鹑对相同化学品的毒性敏感性是存在差异的,用鸟类来评价化学品对爬行动物的潜在风险可能不够准确,应该重视化学品对爬行动物的毒性效应研究。同时,以本土爬行动物的代表物种丽斑麻蜥作为化学品环境风险评价的模式生物,对保护我国本土物种及其多样性、维持生态平衡具有重要意义。     

不同产地麻疯树种仁的含油量及脱油种仁的佛波酯含量

选用国内4种不同产地的麻疯树种仁,对其含油量以及脱油后的佛波酯含量进行了研究.采用GB/T 5512-85粮食、油料检验粗脂肪测定法进行麻疯树种仁含油量的测定;脱油后种仁经二氯甲烷超声提取佛波酯,采用高效液相色谱(HPLC)对其含量进行检测.结果表明,小金河、攀枝花、仁里、片角乡麻疯树种仁的含油量分别为58.29%、60.84%、58.83%和56.12%,脱油后种仁中佛波酯含量分别为2.43 mg g-1、2.25 mg g-1h、2.03 mg g-1和1.21 mg g-1.不同产地的麻疯树种仁含油量均有差异,在深入开发麻疯树资源时,种仁含油量的高低可作为其选种依据之一.4种不同产地的麻疯树种仁脱油后的佛波酯含最均高于无毒麻疯树品种,要利用麻疯树的脱油种仁这一潜在饲料资源,对其进行进一步脱毒处理是必要的.图3表3参10     

与甘蔗抗黑穗病基因连锁的RAPD标记筛选

为了寻找与由黑粉菌(Ustilago sictaminea Syd．)引起的甘蔗黑穗病抗病基因连锁的分子标记，从而借助分子标记辅助选择(MAS)手段提高抗病育种效率，用甘蔗抗病亲本Co1001为母本，用感病亲本Ya71-374为父本，配置杂交组合创制抗病性分离群体为材料，采用人工接种新植蔗，田问种植方法鉴定分离个体新植和宿根的抗病性，借助RAPD和集群分离分析法(BSA)，筛选出一个与抗病基因连锁的多态性片段，并在抗、感池中的个体和池外部分个体上得到验证，该片段大小约520bp．对该片段的进一步克隆、测序和转换研究还在进行中，研究结果为抗病育种的MAS奠定了基础．图2表3参12     

Acclimation of the European sea bass to freshwater: monitoring genetic changes by RAPD polymerase chain reaction to detect DNA polymorphisms

We investigated the use of the polymerase chain reaction (PCR) and the associated random amplification of polymorphic DNA (RAPD) technique to study variation in samples of the sea bass, Dicentrarchus labrax, before and after acclimation to freshwater. Acclimation trials were repeated twice, in 1989 and 1990, for two samples originating from the same broodstock (individuals from different localities along the Italian coasts), with overall mortality rates averaging 94 and 75% in the 2 yr, respectively. Analyses are based on 126 polymorphic RAPD markers, scored in at least 39 individuals for each of the starting and acclimated samples in both years. Analysis of RAPD patterns revealed high levels of DNA polymorphism in both 1989 and 1990 starting samples. The acclimated samples maintained similar polymorphism levels. Shifts in marker frequencies between starting and acclimated samples occurred in both years. A correspondence analysis carried out on multimarker individual profiles suggests that the two starting samples resulted from uneven sampling of the same heterogenous broodstock. This analysis clearly separates RAPD phenotypes from starting and acclimated samples in both years and identifies the RAPD markers responsible for such displacement. Patterns of RAPD variation are compared with previous allozymic studies carried out on the same samples. A major difference between the two studies was the number of markers available. Fewer allozyme loci were studied than were RAPD markers. The cause of repeated shifts for allozyme alleles in replicate experiments were almost certainly due to selection, while statistical chance could explain the repeated shift of only one out of more than 100 RAPD markers. We have shown that RAPD analysis, if carried out carefully, is quite reproducible and sensitive enough to reveal high levels of variation among individuals from the same broodstock. A major drawback of this approach is the still unclear inheritance patterns of RAPD polymorphisms. The use of multivariate analyses is suggested as a possible alternative to traditional population genetics techniques to analyze patterns of variation in the absence of a precise genetic interpretation.     

麻疯树对铅胁迫的生理耐性研究

通过盆栽试验研究土壤中不同浓度（0、200、400、800、1 600和3 200 mg.kg-1）Pb胁迫对麻疯树生长、Pb吸收及相关生理指标的影响。结果表明,当土壤w（Pb）≥800 mg.kg-1时,麻疯树生长受到明显抑制;麻疯树植株不同部位Pb含量随土壤Pb浓度的升高而增加,且各部位Pb含量从高到低依次为根、叶和茎;当土壤w（Pb）≥800mg.kg-1时,麻疯树叶中超氧化物歧化酶（SOD）、过氧化物酶（POD）和过氧化氢酶（CAT）活性,以及可溶性糖、脯氨酸和酸溶性巯基（SH）含量均显著提高,而谷胱甘肽（GSH）含量仅在土壤w（Pb）为3 200 mg.kg-1时才显著增加;可溶性蛋白质含量随Pb浓度的增加呈倒＂W＂型变化,当土壤w（Pb）为400 mg.kg-1时,其含量最大;上述生理指标的变化可缓解重金属Pb对麻疯树的毒害。主成分分析结果表明Pb胁迫处理的聚类结果与各处理麻疯树生物量及生理指标的变化规律相吻合,POD活性和可溶性糖含量对缓解重金属Pb毒害的贡献较大。可见,麻疯树在Pb污染土壤修复中具有一定的应用前景。     

快速提取用于PCR分析的几种蔬菜DNA的方法

利用两种不同的简便方法提取大白菜、大葱和厚皮酣瓜发芽种子的DNA,均能产生具有重现性的RAPD结果这两种方法提取DNA的PCR扩增结果与多次利用苯酚／氯仿提取DNA的结果一致.RNase处理与否对提取DNA的PCR扩增结果没有影响.方法1不用氯仿,但残留蛋白质等容易造成DNA溶解困难;方法2提取的DNA纯度高对于含蛋白质较少的植物器官或组织,可以选用方法1,而对于含蛋白质较多的植物器官或组织,宜选用方法2.两种方法提取的DNA量与用苯酚／氯仿提取DNA的量相似样品之间提取DNA量的多少主要受研磨破碎程度高低所决定.方法1每人每天提取约120个样品,方法2提取约100个样品,比先前的方法快1倍多.所提取的每个样品DNA约能用于100次PCR反应,两种DNA提取方法简便、迅速,为快速进行大量样品的PCR分析提供了条件.     

玉米种子的DNA指纹计算机化鉴定

对１２个优良玉米自效系的ＤＮＡ进行了ＲＡＰＤ分析，共筛选了２５０个Ｏｐｅｒｏｎ引物，其中１２个引物共扩增出５９个多态性产物，根据这５９个多态性ＲＡＰＤ产物，对１２个自交系进行了聚类分析，把它们分为３个群，结果与根据系谱法的聚类结果一致。经过优选，用ＯＰＮ－１１扩增出的１１种ＤＮＡ带，建立了这１２个自交系的ＲＡＰＤ－ＤＮＡ指纹图谱。在该图谱呼弱个自交系都具有特异的ＤＮＡ指纹，可以与其它自效纱相区别。     

麻疯树叶绿ω3脂肪酸脱饱和酶基因的克隆和鉴定

根据几个已知的植物ω3脂肪酸脱胞和酶基因序列,利用RT-PCR和RACE技术从麻疯树中克隆了一条编码叶绿体ω3脂肪酸脱饱和酶的cDNA序列.对该序列的分析表明,该cDNA的编码区长1 368bp,编码一个长度为455个氨基酸的蛋白质,推测的蛋白质相对分子质量(Mr)大小为52.1×103.同源分析显示,推测的氨基酸序列与其他物叶绿体脂肪酸脱饱和酶具有很高的相似性.RT-PCR分析表明,该基因在麻疯树叶片中有着稳定的表达.此外,还通过酵母表达系统鉴定了该基因编码的酶的功能.对转基因酵母的脂肪酸组成分析发现,α亚麻酸在转基因酵母中积累.上述结果表明,该麻疯树cDNA编码了一个叶绿体ω3脂肪酸脱饱和酶.     

K-select analysis: a new method to analyse habitat selection in radio-tracking studies

Two kinds of wildlife habitat studies can be distinguished in the literature: hindcasting and forecasting studies. Hindcasting studies aim to emphasize among a large set of habitat variables those that are of interest for the focus species, whereas forecasting studies are intended to predict habitat selection according to a small number of habitat variables for a given area. We provide here a new analytical tool which relies on the concept of ecological niche, the K-select analysis, for hindcasting studies of habitat selection by animals using radio-tracking data. Each habitat variable defines one dimension in the ecological space. For each animal, the difference between the vector of average available habitat conditions and the vector of average used conditions defines the marginality vector. Its size is proportional to the importance of habitat selection, and its direction indicates which variables are selected. By performing a non-centered principal component analysis of the table containing the coordinates of the marginality vectors of each animal (row) on the habitat variables (column), the K-select analysis returns a linear combination of habitat variables for which the average marginality is greatest. It is a synthesis of variables which contributes the most to the habitat selection. As with principal component analysis, the biological significance of the factorial axes is deduced from the loading of variables. An example is provided: habitat selection by wild boar is studied in a Mediterranean habitat using the K-select analysis. The numerous advantages of the analysis (a large number of variables that can be included, individual variability in habitat selection taken into account, a lack of too strict underlying hypotheses) make it a powerful approach in radio-tracking studies designed to identify habitat variables that are selected by animals.     

Application of random amplified polymorphic DNA (RAPD) markers to evaluate intraspecific genetic variation in red mullet (Mullus barbatus)

The random amplified polymorphic DNA (RAPD) technique was used to evaluate genetic affinities among eight red mullet (Mullus barbatus L., 1758) samples from the Mediterranean Sea. Twenty-nine random primers were used. Despite the variability which was found within samples, no specific RAPD marker for the discrimination of the populations was detected. The data analysis revealed that the genetic diversity among populations is positively related to their geographic distances. The results of this study indicate that the estimated intraspecific variation may be more␣pronounced with RAPD markers than with allozymes when the two approaches are applied on the same populations. Received: 7 November 1997 / Accepted: 30 May 1998     

麻疯树种质资源遗传多样性的ISSR分析

采用ISSR分子标记技术对大戟科属麻疯树9个自然居群的遗传多样性水平和遗传结构进行了研究.用10个引物对9个居群共135个样品进行了扩增,共获得169条清晰的扩增位点,其中多态性位点164个.POPGENE分析结果表明,麻疯树居群具有丰富的遗传多样水平(多态百分率PPB=97.04%,Neis遗传多样性H=0.2357,Shannon信息指数I=0.3760).AMOVA分析表明,9个自然居群间遗传多样性出现了较大的遗传分化(Gst=0.5398)可能与其有限的基因流(Nm=0.4667)和遗传漂变有关;而居群内有限的遗传分化可能是由于麻疯树自交、近交占主导方式的繁育方式有关.并进行了麻疯树居群的聚类分析.图3表4参19