有机磷农药草甘膦异丙胺盐对球形棕囊藻的刺激效应

设置0、0．001、0．01、0．1、l和10mg·L-16个质量浓度梯度,测定了草甘膦异丙胺盐（Glyphosate—isopropylammonium）农药对球形棕囊藻（Phaeocystis globosa）生长、叶绿素a含量、SOD和CAT活性的影响,探讨了有机磷农药对球形棕囊藻的毒物刺激效应。结果表明,低浓度的草甘膦异丙胺盐对球形棕囊藻的生长呈现出刺激效应。在实验所设定的6个质量浓度梯度范围内,0．001mg·L0和0．01mg·L-1质量浓度处理下的刺激效应最为显著。该两个质量浓度处理下,球形棕囊藻的平均相对增长率比对照分别提高了1．27％和0．45％,叶绿素a含量分别比对照提高了9．2％和2．5％,SOD活性提高了5．9％和7．2％,CAT活性提高了93％和155％;而当草甘膦异丙胺盐质量浓度在0．1mg·L-1以上时,球形棕囊藻的生长率、叶绿素a含量、SOD活性均显著低于对照。草甘膦异丙胺盐在0．001mg·L-1和0．01mg·L-1范围内对球形棕囊藻均呈现刺激效应,而高于0．1mg·L-1时球形棕囊藻各生理指标表现出显著抑制效应。研究结果为了解有机磷农药对海洋微藻生长的影响特征,揭示有机磷农药对微藻产生低促高抑的规律和为深入探索赤潮暴发的成因提供依据。     

邻苯二甲酸二丁酯对海洋微藻生长的影响

近年来,内陆和近海水体中的一种典型环境激素邻苯二甲酸二丁酯(DBP)含量显著上升,但其对海洋生态系统的影响并不明确。本研究选取7种海洋微藻为实验材料,包括1种甲藻(东海原甲藻Prorocentrum donghaiense),2种定鞭藻(小普林藻Prymesium parvum和球形棕囊藻Phaeocystis globosa),2种硅藻(中肋骨条藻Skeletonema costatum和三角褐指藻Phaeodactylum tricornutum),以及1种隐藻(红胞藻Rhodomonus salina)和1种绿藻(海洋小球藻Chlorella sp.),设置5个DBP暴露浓度(5、10、20、50、100μg·L-1),研究其对海洋微藻生长的影响,并探索DBP暴露对微藻抗氧化系统和光合系统的影响。结果表明:在所有暴露组中,球形棕囊藻、小普林藻、东海原甲藻、红胞藻、海洋小球藻生长速率显著增加;5~20μg·L-1的DBP暴露下中肋骨条藻不受影响,50、100μg·L-1下受到抑制;所有DBP暴露组对三角褐指藻没有显著影响。在50μg·L-1DBP暴露下,随着时间的延长,球形棕囊藻的SOD、CAT、MDA均表现出先升高后下降的趋势,第7天藻的叶绿素a、叶绿素b,类胡萝卜素含量较对照组分别增加了23%、10%、48%,球形棕囊藻光系统II(PSII)的最大光能转化效率(Fv/Fm)、PSII的潜在活性(Fv/F0)、光合性能指数PI分别增加了4.8%、16%、69%。研究发现DBP对海洋微藻的影响具有种间差异性,能够显著促进有害赤潮藻球形棕囊藻的生长,近岸水体DBP含量的增加可能改变浮游植物群落组成,进而增加有害藻华暴发的风险。     

石油降解菌株G5 16S rDNA全序列的系统学分析

用PCR方法扩增了一株石油降解菌株G5的16S rRNA基因全序列，并对其进行了克隆和测序．对该序列在GenBank中的BLAST结果表明，所有与该序列高度同源的序列都是假单胞菌的16S rRNA基因．其中假单胞菌的代表菌株Pseudomonas aeruginosa，P．fluoroscens，P .putida，P.syringae的16S rRNA基因序列与G5的16S rRNA基因序列同源性分别为93．4％，98．4％，96．3％，97．5％．对G5和其他39株假单胞菌的16S rRNA基因序列进行聚类分析，获得的系统发育树与RDP(Ribosomal Database Project)报道的系统发育树基本一致，其中菌株G5与5株P．chlororaphis聚类在一起．图2参7     

大贵寺国家森林公园野生青檀居群的遗传多样性

利用ISSR分子标记技术对湖北省大贵寺国家森林公园野生青檀（Pteroceltis tatarinowii Maxim．）居群进行遗传多样性分析。用11条ISSR引物对6个青檀居群64个样品进行扩增,扩增片段长度在200bp至3000bp之间,检测到179个位点,其中多态位点165个,多态位点百分率（P）为92．14％。青檀在物种水平上的Nei基因多样性指数（胁）和Shannon信息指数∽分别为0．273和0．423,在居群水平上分别为0．225和0．343,显示出青檀有着较高的遗传多样性。居群间的遗传分化系数（Gsr）为0．192,表明青檀居群间存在着较大的遗传分化;UPGMA聚类分析表明遗传距离与海拔差距有一定的相关性,相邻海拔的青檀居群间遗传距离较近。不同海拔导致的异质生境可能是影响青檀居群遗传分化的主要原因。     

紫花苜蓿根际氢氧化细菌的分离与鉴定

利用气体循环培养体系从陕西乾县HUP-豆科植物紫花苜蓿(Medicago sativa)根际土壤中分离获得37株细菌.菌株氧化氢能力测定结果表明,8株菌氧化氢和自养生长能力较强,初步确定为氢氧化细菌类群;根据其形态特征、培养特征和生理生化特性,鉴定为7个不同属:假单胞菌属(Pseudomonas)、邻单胞菌属(Plesiomonas)、脂肪杆菌属(Pimelobacter)、黄色杆菌属(Xanthobacter)、勒米诺氏菌属(Leminorella)、地杆菌属(Terrabacter)和稀有杆菌属(Rarobacter);其中氧化氢能力最强的优势菌株WMQ-7 16S rDNA序列(GenBank登录号为EU807744)长度为1 451bp,GC含量为53.8%,其核苷酸序列与假单胞菌属同源性高于99%,在系统发育树上位于同一分支,将WMQ-7菌株鉴定为假单胞菌属(Pseudomonas).图2表5参16     

基于rpoC1基因的微囊藻属分子系统学研究

测定了广东省9个水库4株铜绿微囊藻Microcystis aeruginosa、5株水华微囊藻M.flos-aquae和4株未定种微囊藻rpoC1基因部分序列,结合GenBank下载的日本5个水体11株铜绿微囊藻、5株绿色微囊藻M.viridis和5株惠氏微囊藻M.wesenbergii间源序列,进行序列分析.结果显示,34株微囊藻存在21种基因型,序列相似性达97.6%～100%.在邻接树上不同形态种和不同地理来源的藻株混杂在一起,没有形成明显的谱系结构和地理结构:同一形态种藻株可能具有不同的基因型,而相同基因型的藻株可能是不同的形态种;从同一水体中分离的微囊藻具有不同的形态种和不同的基因型,而不同水体分离的微囊藻有时又具有相同基因型,表明rpoC1基因序列无法区分形态种和地理株,支持Kondo和Otsuka提出的暂将铜绿微囊藻、水华微囊藻、惠氏微囊藻和绿色微囊藻等归为铜绿微囊藻复合种的分类处理.     

有机磷农药草甘膦异丙胺盐对球形棕囊藻的刺激效应

设置0、0.001、0.01、0.1、1和10mg·L-16个质量浓度梯度,测定了草甘膦异丙胺盐(Glyphosate-isopropylammonium)农药对球形棕囊藻(Phaeocystis globosa)生长、叶绿素a含量、SOD和CAT活性的影响,探讨了有机磷农药对球形棕囊藻的毒物刺激效应。结果表明,低浓度的草甘膦异丙胺盐对球形棕囊藻的生长呈现出刺激效应。在实验所设定的6个质量浓度梯度范围内,0.001mg·L-1和0.01mg·L-1质量浓度处理下的刺激效应最为显著。该两个质量浓度处理下,球形棕囊藻的平均相对增长率比对照分别提高了1.27%和0.45%,叶绿素a含量分别比对照提高了9.2%和2.5%,SOD活性提高了5.9%和7.2%,CAT活性提高了93%和155%;而当草甘膦异丙胺盐质量浓度在0.1mg·L-1以上时,球形棕囊藻的生长率、叶绿素a含量、SOD活性均显著低于对照。草甘膦异丙胺盐在0.001mg·L-1和0.01mg·L-1范围内对球形棕囊藻均呈现刺激效应,而高于0.1mg·L-1时球形棕囊藻各生理指标表现出显著抑制效应。研究结果为了解有机磷农药对海洋微藻生长的影响特征,揭示有机磷农药对微藻产生低促高抑的规律和为深入探索赤潮暴发的成因提供依据。     

长柄石杉不同地理居群叶绿体DNA trnL-trnF序列变异与聚类分析

采用直接测序法,对石杉科广布种长柄石杉(Huperzia serrata var.longipetiolata)21个居群(福建省19个居群和江西省2个居群)共计126株个体的叶绿体DNA trnL-trnF序列进行测序,用Clustal X和MEGA5.0软件进行序列分析,UPGMA法构建聚类图,以期了解序列变异与地理分布的关系,为长柄石杉资源的保护及开发利用提供参考依据.扩增获得的序列全长在928-967 bp之间,经排序后两端切平,序列长925 bp,G+C平均含量为34.05%;21个长柄石杉居群的cpDNA trnL-trnF序列存在20个变异位点,5个信息位点.UPGMA聚类结果显示,福建省居群与江西居群存在较大遗传距离,分聚为不同分支;福建省内19个居群再分聚为3个分支,其中11个居群间的遗传距离为零.研究结果表明长柄石杉居群间存在较明显的遗传分化和一定强度的基因流,居群间的叶绿体DNA trnL-trnF序列变异与地理分布尤其是山脉形成的隔离和屏障有关,较高的遗传多样性和基因流水平有利于长柄石杉种群的生存与进化.     

强电离先进氧化OH·治理赤潮试验

采用强电场电离H2O、O2方法，在分子层次上加工成高浓度OH溶液，喷洒在有赤潮生物的海面上，当海水的羟基比值浓度达到0．68mg／L时，致死洛氏角刺藻(Chaetoceros lorenzianus)等29种赤潮生物效率达到99．89％，致死细菌、弧菌效率达到100％，致死膝沟藻孢子、多甲藻孢子效率达到100％；赤潮生物叶绿素a含量低于检测方法低限值；剩余OH分解成H2O、O2；尸体将分解成CO2、H2O和微量无机盐．试验数据表明，强电离先进氧化OH是治理赤潮有效、可行的绿色新方法，实现了治理赤潮以及加工羟基过程的零污染、零废物排放、零残留物．图3表2参30     

青岛东风盐场中极端嗜盐古细菌的特性

从青岛东风盐场分离到3株嗜盐古细菌（编号：ZDA－1,ZDA－2和ZDA－5）,细胞为多形态杆状（0．7～15μm×2．0～50μm）,最适生长NaCl浓度为3．4mol／L,含有甘油二醚脂,类胡萝卜素色素和极性脂TGD－2（三糖基二醚脂）,x（C＋C）分别为63．7％,62．7％,和64．3％,据此,这3株菌可归入嗜盐小盒苗属（Hchoarcula）;但它们不水解淀粉,明胶不液化,不水解酪蛋白等生理生化特性不同于该属中现已正式承认的两个种,因此,本工作分离的3株菌可能是嗜盐小盒菌属一个新种.     

Interspecific and intraspecific identification of Dendrobium based on the psbAtrnH intergenic region sequences and the 5S rRNA gene spacer sequences北大核心CSCD

This research aimed to investigate the interspecific and intraspecific identification of Dendrobium by using the multi-locus method so as to provide a molecular basis for Dendrobium identification through the combination of chloroplast psbA-trnH intergenic region sequences and ribosome 5S rRNA gene spacer sequences. PCR direct sequencing was applied to detect the chloroplast psbA-trnH intergenic region sequences as well as the ribosome 5S rRNA gene spacer sequences of 12 Dendrobium species, while the psbA-trnH intergenic region sequences of Dendrobium denneanum dq-2 variety and dq- 5line were cloned and sequenced for single nucleotide polymorphism (SNP) analyzing. The sequences were analyzed by the software Sequencher4.14, Bioedit7.0, MEGA5.2 and Dansp5.0; the interspecific and intraspecific Kimara-2-Parameter(K2P) distances were also calculated. The phylogenetic tree (using Neighbor joining method) was constructed with Bulbophyllum odoratissimum and Bletilla striata as outgroup. The results showed an average length of chloroplast psbA-trnH gene sequences in Dendrobium as 742.3 bp, with 72 variable sites, including 33 information sites; the average length of the ribosome 5S rRNA gene spacer sequences in Dendrobium was 336.4 bp, with 213 variable sites including 139 information sites. Using psbAtrnH intergenic region sequences in combination with ribosome 5S rRNA gene spacer sequences can not only identify D. denneanum, D. hancockil, D. thysiflorum, D. devonianum, D. moniliforme, D. chrysotoxum, D. officinale, D. heterocarpum and D. nobile, but also differentiate D. officinale from different geographical populations, and distinguish the dq-2 variety and dq 5line with SNP in the multi locus of D. denneanum.     

慢生花生根瘤菌的遗传多样性研究

用ＲＥＰ１Ｒ１和ＲＥＰ２１ＤＮＡ为引物,对２２株四川土著慢生花生根瘤菌染色体ＤＮＡ的基因外回文重复序列（ＲｅｐｅｔｉｔｉｖｅＥｘｔｒｏｇｅｎｉｃｐａｌｉｎｄｒｏｍｉｃｓｅｑｕｅｎｃｅＲＥＰ）进行了ＰＣＲ扩增和凝胶电泳,并对电泳结果的指纹图型进行了相似性聚类分析．结果表明了四川土著慢生花生根瘤菌的遗传多样性．指纹图形是根瘤菌多样性研究中一种简便而有效的方法     

Molecular systematic and phylogenetic assessment of 34 calanoid copepod species of the Calanidae and Clausocalanidae

DNA sequences for a 639 bp region of mitochondrial cytochrome oxidase I (mtCOI) were determined for 34 species of ten genera in two families of calanoid copepods, including: Calanoides, Cosmocalanus, Meoscalanus, Nannocalanus, Neocalanus, and Undinula (family Calanidae); and Clausocalanus, Ctenocalanus, Drepanopus, and Pseudocalanus (family Clausocalanidae). MtCOI gene sequences proved to be diagnostic molecular systematic characters for accurate identification and discrimination of the species. Levels of mtCOI variation within species (range: 1-4%) were significantly less than those between species (9-25%). Higher levels of intraspecific variation (>2%) usually resulted from comparisons between ecologically distinct or geographically isolated populations. MtCOI sequence variation resolved evolutionary relationships among species of Clausocalanus, Neocalanus, and Pseudocalanus, although there was evidence of saturation at some variable sites. Phylogenetic relationships among 11 copepod genera (adding Calanus to the list above) were reconstructed using a 660 bp region of nuclear small-subunit 18S rRNA, a slowly evolving gene that showed no variability within a species and differed by <1-6% among the genera. The 18S rRNA molecular phylogeny was consistent with the accepted limits of the Calanidae and Clausocalanidae and clearly resolved relationships among genera within each family. This molecular systematic and phylogenetic study was part of the ZooGene project, an international partnership to create a DNA sequence database as a tool for uniform, molecularly based species identification of planktonic calanoid copepods and euphausiids.     

Monitoring microbial diversity and natural product profiles of the sponge<Emphasis Type="Italic"> Aplysina cavernicola</Emphasis> following transplantation

In order to assess the stability of the microbial community of the sponge Aplysina cavernicola under in situ conditions, sponges were transplanted from their original location (>40 m depth) to shallower, more light-exposed sites (7-15 m depth). Transmission electron microscopy revealed that the microbial community remained visually unchanged and free of cyanobacteria over the experimental time period of 3 months. Denaturing gradient gel electrophoresis (DGGE) of PCR-amplified partial 16S rRNA gene sequences allowed a distinction between the variable and permanent fraction of the bacterial community. Comparative sequence analysis of four variable DGGE bands revealed high sequence similarity to representatives of the Alpha- and Gammaproteobacteria and the phylum Bacteroidetes, which have been recovered previously from Mediterranean seawater as clone sequences or by cultivation. Seven (out of 12) permanent DGGE bands showed high sequence similarity to a sponge-specific, monophyletic 16S rRNA gene sequence cluster within the Acidobacteria division, and to a sequence cluster of uncertain affiliation. These sequence clusters represent members of a common microbial community that is shared among distantly related sponges from different, non-overlapping geographic regions. Four additional permanent DGGE bands showed high sequence similarity to a Betaproteobacterium, Burkholderia cepacia, which is not typically known as a marine bacterium. High-performance liquid chromatography analyses of sponge tissues revealed no changes in metabolite pattern, indicating that these compounds are expressed constitutively irrespective of the variations resulting from the transplantation experiment.     

A molecular approach for the identification of meiofaunal turbellarians (Platyhelminthes,Turbellaria)

In the absence of reliable morphological characters, or in conjunction with morphology-based identifications, meiofaunal turbellarians may also be identified using the nucleotide sequence of a portion of the large subunit of the ribosomal RNA (26/28S rRNA). A 284 base pair-long region of the 26/28S rRNA has been identified by isolating genomic DNA from ten species of turbellarians belonging to four orders, namely, the Proseriata, Macrostomida, Prolecithophora and Acoela. The proseriates had been collected from localities in Europe and Israel and were preserved in ethanol. The remaining turbellarians were isolated from intertidal sediment samples collected from two sites on the Maine and New Hampshire coast, USA in 1992. Amplification of the genomic DNA was carried out using two primers designed to match the nucleotide sequence of a portion of the 26/28S rDNA gene of the terrestrial nematode,Caenorhabditis elegans (Maupas 1900). This area consists of a highly variable, about 150 base pair-long region, called the D3 expansion segment, followed by a very conserved stretch of sequence. When folded into its secondary structure, the conserved region will form stem structures that correspond to helices 15 to 18 of theC. elegans structural model. The sequence alignment program PILEUP was used to perform a cluster analysis (unweighted pair group method using arthmetic averages, UPGMA) on the sequences. This analysis revealed that the helices allow for the classification of the turbellarians at the level of families and above, whereas if the D3 expansion segment itself was included in the analysis, intrageneric and intraspecific groupings could be established.     

Low Genetic Variability in the Hawaiian Monk Seal

The Hawaiian monk seal (   Monachus schauinslandi) is a critically endangered species that has failed to recover from human exploitation despite decades of protection and ongoing management efforts designed to increase population growth. The seals breed at five principal locations in the northwestern Hawaiian islands, and inter-island migration is limited. Genetic variation in this species is expected to be low due to a recent population bottleneck and probable inbreeding within small subpopulations. To test the hypothesis that small population size and strong site fidelity has led to low within-island genetic variability and significant between-island differentiation, we used two independent approaches to quantify genetic variation both within and among the principal subpopulations. Mitochondrial control region and tRNA gene sequences (359 base pairs) were obtained from 50 seals and revealed very low genetic diversity (0.6% variable sites), with no evidence of subpopulation differentiation. Multilocus DNA fingerprints from 22 individuals also indicated low genetic variation in at least some subpopulations (band-sharing values for "unrelated" seals from the same island ranged from 49 to 73%). This method also provided preliminary evidence of population subdivision (  F'_st estimates of 0.20 and 0.13 for two adjacent island pairs). Translocations of seals among islands may therefore have the potential to relieve local inbreeding and possibly to reduce the total amount of variation preserved in the population. Genetic variation is only one of many factors that determine the ability of an endangered species to recover. Maintenance of existing genetic diversity, however, remains an important priority for conservation programs because of the possibility of increased disease resistance in more variable populations and the chance that inbreeding depression may only be manifest under adverse environmental conditions.     

一株产生物絮凝剂的Bacillus sp.的分离与鉴定

从重庆城南污水处理厂的活性污泥中分离筛选到一株絮凝剂产生菌,革兰氏染色呈阳性,好氧,有芽孢,可运动,短杆;分离菌的基因组DNA(G +C)mol%含量测定为5 0 .6 % ,16SrRNA序列分析表明,分离筛选出的絮凝剂产生菌的16SrRNA基因序列与Bacillus菌有高度同源性,从而确定絮凝剂产生菌RL - 2归于Bacillusbrevis菌属。絮凝实验表明:在有CaCl2 存在时用Bacillussp .RL - 2生物絮凝剂处理土壤悬液时用量少(10 0mL样品只需2mL絮凝剂) ,絮体形成快,矾花大,泥少;体系温度对活性影响很小,且在酸性与碱性条件下,絮凝活性均很高     

十字花科蔬菜BcMF13同源基因的克隆及进化分析

在十字花科芸薹属的8个物种中扩增到与十字花科蔬菜花粉发育相关的一个重要基因BcMF13(GenBank登陆号:EF158459)的同源序列,获得8个同源序列的DNA序列全长602～607 bp,均含有一个内含子区,编码73个氨基酸,在内含子区内存在1个插入/缺失、5处颠换、4处转换.对8个同源基因的氨基酸比对发现该基因在十字花科物种内有很强的保守性.基于Kimura双参数距离,构建了BcMF13同源基因在十字花科中进化的NJ系统树,反映出南方大白菜与北方大白菜存在不同的演化过程.     

Risk aversion in hand-reared bananaquits

Summary To study risk aversion in hand-reared bananaquits (Coereba flaveola) we placed individuals in a cage with a 1 m² floral board having a random array of 85 yellow and 85 red artificial flowers. Flowers of one color were filled with the same quantity of nectar (constant flowers), whereas flowers of the other color were filled with variable quantities of nectar (variable flowers). The constant and variable flowers had identical mean contents, only their variances differed. After three presentations, the constant flowers were made variable and vice versa to control for color preferences. Naive foragers tended to avoid variable flowers. The degree of risk aversion was influenced by previous experience, the relative variability of the variable flowers, and flower color. Variable flowers having similar coefficients of variation, but different reward variables (volume or concentration) resulted in similar levels of risk aversion. Within single foraging episodes the following was observed: sequences of constant flowers increased while sequences of variable flowers remained similar to random foraging; the probability of revisiting a constant flower was higher than revisiting a variable flower; the average amount of nectar consumed from constant and variable flowers was similar within the assessment periods (prior to favoring constant flowers); the proportion of visits falling below the mean expected reward during the assessment period or its inverse (the proportion visited with at least the equivalent of the mean) may be a cue used for risk aversion; risk aversion persisted through long foraging bouts despite changed nectar distributions suggesting that the bananaquits did not track resource distributions well within foraging bouts.